RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 TSPEAR-AS2P59090 65 aa12.82□□□□□ -0.36
PCDHA13-201ENST00000289272 C11orf45Q8TAV5 145 aa12.82□□□□□ -0.36
PCDHA13-201ENST00000289272 KLK12Q9UKR0 248 aa12.81□□□□□ -0.36
PCDHA13-201ENST00000289272 PRO0628Q9UI54 55 aa12.81□□□□□ -0.36
PCDHA13-201ENST00000289272 INAFM1C9JVW0 142 aa12.81□□□□□ -0.36
PCDHA13-201ENST00000289272 UBE2AP49459 152 aa12.81□□□□□ -0.36
PCDHA13-201ENST00000289272 WNK1Q9H4A3 2382 aa12.81□□□□□ -0.36
PCDHA13-201ENST00000289272 NTM-AS1Q6ZSK4 140 aa12.8□□□□□ -0.36
PCDHA13-201ENST00000289272 LINC00269Q8N2A0 174 aa12.8□□□□□ -0.36
PCDHA13-201ENST00000289272 IGF2RP11717 2491 aa12.8□□□□□ -0.36
PCDHA13-201ENST00000289272 TLN1Q9Y490 2541 aaKnown RBP12.8□□□□□ -0.36
PCDHA13-201ENST00000289272 ZNF702PQ9H963 129 aa12.8□□□□□ -0.36
PCDHA13-201ENST00000289272 M0R378 163 aa12.79□□□□□ -0.36
PCDHA13-201ENST00000289272 CDC42SE2Q9NRR3 84 aa12.79□□□□□ -0.36
PCDHA13-201ENST00000289272 HILS1P60008 231 aa12.79□□□□□ -0.36
PCDHA13-201ENST00000289272 SEC61GP60059 68 aa12.79□□□□□ -0.36
PCDHA13-201ENST00000289272 A8MZ25 164 aa12.78□□□□□ -0.36
PCDHA13-201ENST00000289272 Q6ZQY7 126 aa12.78□□□□□ -0.36
PCDHA13-201ENST00000289272 PIEZO1Q92508 2521 aa12.78□□□□□ -0.36
PCDHA13-201ENST00000289272 ESM1Q9NQ30 184 aa12.78□□□□□ -0.36
PCDHA13-201ENST00000289272 LINC00242Q5T6M2 205 aa12.77□□□□□ -0.36
PCDHA13-201ENST00000289272 Q8N814 137 aa12.77□□□□□ -0.36
PCDHA13-201ENST00000289272 SMIM1B2RUZ4 78 aa12.77□□□□□ -0.36
PCDHA13-201ENST00000289272 NOTCH2Q04721 2471 aa12.77□□□□□ -0.36
PCDHA13-201ENST00000289272 CDSNQ15517 529 aa12.77□□□□□ -0.37
PCDHA13-201ENST00000289272 DCANP1Q8TF63 244 aa12.77□□□□□ -0.37
PCDHA13-201ENST00000289272 LY6G6DO95868 133 aa12.77□□□□□ -0.37
PCDHA13-201ENST00000289272 SCXQ7RTU7 201 aa12.76□□□□□ -0.37
PCDHA13-201ENST00000289272 B9D2Q9BPU9 175 aa12.76□□□□□ -0.37
PCDHA13-201ENST00000289272 PLA2G2AP14555 144 aa12.76□□□□□ -0.37
PCDHA13-201ENST00000289272 C10orf99Q6UWK7 81 aa12.76□□□□□ -0.37
PCDHA13-201ENST00000289272 CENPFP49454 3210 aa12.76□□□□□ -0.37
PCDHA13-201ENST00000289272 LINC00959A0A1B0GUT2 108 aa12.75□□□□□ -0.37
PCDHA13-201ENST00000289272 IGLV1-40P01703 118 aa12.75□□□□□ -0.37
PCDHA13-201ENST00000289272 H0Y9J4 135 aa12.75□□□□□ -0.37
PCDHA13-201ENST00000289272 C4orf48Q5BLP8 95 aa12.75□□□□□ -0.37
PCDHA13-201ENST00000289272 ARHGAP32A7KAX9 2087 aa12.75□□□□□ -0.37
PCDHA13-201ENST00000289272 PRYO14603 147 aa12.74□□□□□ -0.37
PCDHA13-201ENST00000289272 LINC01561Q8N1V8 128 aa12.74□□□□□ -0.37
PCDHA13-201ENST00000289272 CHCHD7Q9BUK0 85 aa12.73□□□□□ -0.37
PCDHA13-201ENST00000289272 DEFB4AO15263 64 aa12.73□□□□□ -0.37
PCDHA13-201ENST00000289272 NCOR2Q9Y618 2525 aa12.73□□□□□ -0.37
PCDHA13-201ENST00000289272 DSCAML1Q8TD84 2053 aa12.73□□□□□ -0.37
PCDHA13-201ENST00000289272 SMCPP49901 116 aaPredicted RBP12.73□□□□□ -0.37
PCDHA13-201ENST00000289272 LINC01006Q8NI28 216 aa12.73□□□□□ -0.37
PCDHA13-201ENST00000289272 ZNF580Q9UK33 172 aa12.73□□□□□ -0.37
PCDHA13-201ENST00000289272 PRB2P02812 416 aaPredicted RBP12.72□□□□□ -0.37
PCDHA13-201ENST00000289272 PROK1P58294 105 aa12.72□□□□□ -0.37
PCDHA13-201ENST00000289272 PPDPFQ9H3Y8 114 aa12.72□□□□□ -0.37
PCDHA13-201ENST00000289272 PTPN13Q12923 2485 aa12.72□□□□□ -0.37
PCDHA13-201ENST00000289272 NAV2Q8IVL1 2488 aa12.72□□□□□ -0.37
PCDHA13-201ENST00000289272 KIR2DL5BQ8NHK3 375 aa12.71□□□□□ -0.37
PCDHA13-201ENST00000289272 ADAMTSL4-AS1Q5T5F5 129 aa12.71□□□□□ -0.38
PCDHA13-201ENST00000289272 A6NED7 52 aa12.7□□□□□ -0.38
PCDHA13-201ENST00000289272 ZNF73O43830 326 aaPredicted RBP12.7□□□□□ -0.38
PCDHA13-201ENST00000289272 CXCL6P80162 114 aa12.7□□□□□ -0.38
PCDHA13-201ENST00000289272 COL4A2P08572 1712 aa12.69□□□□□ -0.38
PCDHA13-201ENST00000289272 A0A087WZ39 114 aa12.69□□□□□ -0.38
PCDHA13-201ENST00000289272 A0A087WVE0 104 aa12.68□□□□□ -0.38
PCDHA13-201ENST00000289272 DEFB131BA0A096LNP1 70 aa12.68□□□□□ -0.38
PCDHA13-201ENST00000289272 IGKV4-1P06312 121 aa12.67□□□□□ -0.38
PCDHA13-201ENST00000289272 A0A087WYN8 130 aa12.66□□□□□ -0.38
PCDHA13-201ENST00000289272 TRAV10A0A0B4J240 114 aa12.65□□□□□ -0.38
PCDHA13-201ENST00000289272 F8WDY8 70 aa12.63□□□□□ -0.39
PCDHA13-201ENST00000289272 BEAN1Q3B7T3 259 aa12.63□□□□□ -0.39
PCDHA13-201ENST00000289272 C1orf158Q8N1D5 194 aa12.63□□□□□ -0.39
PCDHA13-201ENST00000289272 Q8N3U1 123 aa12.63□□□□□ -0.39
PCDHA13-201ENST00000289272 SYCNQ0VAF6 134 aa12.63□□□□□ -0.39
PCDHA13-201ENST00000289272 LINC00846Q9NV44 126 aa12.63□□□□□ -0.39
PCDHA13-201ENST00000289272 LELP1Q5T871 98 aa12.62□□□□□ -0.39
PCDHA13-201ENST00000289272 TMEM254Q8TBM7 123 aa12.62□□□□□ -0.39
PCDHA13-201ENST00000289272 KIF25-AS1Q9Y6Z4 181 aa12.62□□□□□ -0.39
PCDHA13-201ENST00000289272 C2CD3Q4AC94 2353 aa12.62□□□□□ -0.39
PCDHA13-201ENST00000289272 TRBV7-6A0A0J9YX20 115 aa12.61□□□□□ -0.39
PCDHA13-201ENST00000289272 C3orf84H3BNL1 204 aa12.61□□□□□ -0.39
PCDHA13-201ENST00000289272 SORL1Q92673 2214 aa12.61□□□□□ -0.39
PCDHA13-201ENST00000289272 PMAIP1Q13794 54 aa12.61□□□□□ -0.39
PCDHA13-201ENST00000289272 IGLV5-39A0A0G2JS06 123 aa12.61□□□□□ -0.39
PCDHA13-201ENST00000289272 CCDC168Q8NDH2 2452 aa12.6□□□□□ -0.39
PCDHA13-201ENST00000289272 AVPP01185 164 aa12.6□□□□□ -0.39
PCDHA13-201ENST00000289272 ESRGQ1W209 222 aa12.6□□□□□ -0.39
PCDHA13-201ENST00000289272 A0A1W2PPR1 153 aa12.59□□□□□ -0.39
PCDHA13-201ENST00000289272 K7ERS5 55 aa12.59□□□□□ -0.39
PCDHA13-201ENST00000289272 ADAMTS20P59510 1910 aa12.58□□□□□ -0.39
PCDHA13-201ENST00000289272 WFDC10BQ8IUB3 73 aa12.58□□□□□ -0.4
PCDHA13-201ENST00000289272 C18orf65Q6ZTR6 163 aa12.58□□□□□ -0.4
PCDHA13-201ENST00000289272 Q8N9L7 120 aa12.58□□□□□ -0.4
PCDHA13-201ENST00000289272 COX6A2Q02221 97 aa12.57□□□□□ -0.4
PCDHA13-201ENST00000289272 XAGE1AQ9HD64 81 aa12.57□□□□□ -0.4
PCDHA13-201ENST00000289272 RAI1Q7Z5J4 1906 aaPredicted RBP12.57□□□□□ -0.4
PCDHA13-201ENST00000289272 A0A1B0GW54 56 aa12.57□□□□□ -0.4
PCDHA13-201ENST00000289272 Q6ZVQ6 151 aa12.57□□□□□ -0.4
PCDHA13-201ENST00000289272 SONP18583 2426 aaKnown RBP12.57□□□□□ -0.4
PCDHA13-201ENST00000289272 MYO9AB2RTY4 2548 aa12.57□□□□□ -0.4
PCDHA13-201ENST00000289272 EGFEM1PQ0D2K5 195 aa12.57□□□□□ -0.4
PCDHA13-201ENST00000289272 LINC01547P58512 204 aaPredicted RBP12.56□□□□□ -0.4
PCDHA13-201ENST00000289272 FAM19A1Q7Z5A9 133 aa12.56□□□□□ -0.4
PCDHA13-201ENST00000289272 C16orf95Q9H693 158 aa12.56□□□□□ -0.4
PCDHA13-201ENST00000289272 FAM30AQ9NZY2 134 aa12.56□□□□□ -0.4
PCDHA13-201ENST00000289272 LINC00482Q8N8I6 264 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms