RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 ZFAND6Q6FIF0 208 aa13.52□□□□□ -0.25
BRAF-201ENST00000288602 ARL17AQ8IVW1 177 aa13.52□□□□□ -0.25
BRAF-201ENST00000288602 GAGE12HA6NDE8 117 aa13.51□□□□□ -0.25
BRAF-201ENST00000288602 ETDBQ3ZM63 59 aa13.51□□□□□ -0.25
BRAF-201ENST00000288602 DAND5Q8N907 189 aa13.51□□□□□ -0.25
BRAF-201ENST00000288602 FBN1P35555 2871 aaKnown RBP13.51□□□□□ -0.25
BRAF-201ENST00000288602 SMIM9A6NGZ8 99 aa13.51□□□□□ -0.25
BRAF-201ENST00000288602 ZNF625Q96I27 306 aaPredicted RBP13.51□□□□□ -0.25
BRAF-201ENST00000288602 IGHV4-28A0A0C4DH34 117 aa13.49□□□□□ -0.25
BRAF-201ENST00000288602 SMIM1B2RUZ4 78 aa13.49□□□□□ -0.25
BRAF-201ENST00000288602 J3QR89 54 aa13.49□□□□□ -0.25
BRAF-201ENST00000288602 WFDC9Q8NEX5 89 aa13.49□□□□□ -0.25
BRAF-201ENST00000288602 H7C2G1 150 aa13.49□□□□□ -0.25
BRAF-201ENST00000288602 APOC4P55056 127 aa13.49□□□□□ -0.25
BRAF-201ENST00000288602 SCGB1A1P11684 91 aa13.48□□□□□ -0.25
BRAF-201ENST00000288602 FAM19A3Q7Z5A8 133 aa13.48□□□□□ -0.25
BRAF-201ENST00000288602 PRO1854Q9UHT4 67 aa13.48□□□□□ -0.25
BRAF-201ENST00000288602 A0A0U1RRA0 63 aa13.48□□□□□ -0.25
BRAF-201ENST00000288602 ATP6V0E2Q8NHE4 81 aa13.48□□□□□ -0.25
BRAF-201ENST00000288602 Q9H8V8 135 aa13.48□□□□□ -0.25
BRAF-201ENST00000288602 IGLV5-39A0A0G2JS06 123 aa13.47□□□□□ -0.25
BRAF-201ENST00000288602 IGHV4-30-4P0DP06 118 aa13.47□□□□□ -0.25
BRAF-201ENST00000288602 CELA1Q9UNI1 258 aa13.47□□□□□ -0.25
BRAF-201ENST00000288602 F5H768 121 aa13.47□□□□□ -0.25
BRAF-201ENST00000288602 OXLD1Q5BKU9 147 aa13.47□□□□□ -0.25
BRAF-201ENST00000288602 ANK2Q01484 3957 aa13.47□□□□□ -0.25
BRAF-201ENST00000288602 PRO0255Q9UI72 69 aa13.46□□□□□ -0.26
BRAF-201ENST00000288602 PKD1L1Q8TDX9 2849 aa13.45□□□□□ -0.26
BRAF-201ENST00000288602 STAB1Q9NY15 2570 aa13.45□□□□□ -0.26
BRAF-201ENST00000288602 H7C423 109 aa13.45□□□□□ -0.26
BRAF-201ENST00000288602 NDUFA1O15239 70 aa13.45□□□□□ -0.26
BRAF-201ENST00000288602 PSMB2P49721 201 aa13.45□□□□□ -0.26
BRAF-201ENST00000288602 SPATA25Q9BR10 227 aa13.45□□□□□ -0.26
BRAF-201ENST00000288602 MIAQ16674 131 aa13.44□□□□□ -0.26
BRAF-201ENST00000288602 PRO0461Q9UI25 63 aa13.44□□□□□ -0.26
BRAF-201ENST00000288602 LYRM9A8MSI8 78 aa13.44□□□□□ -0.26
BRAF-201ENST00000288602 TMEM262E9PQX1 116 aa13.44□□□□□ -0.26
BRAF-201ENST00000288602 PAX4O43316 350 aa13.44□□□□□ -0.26
BRAF-201ENST00000288602 SPANXDQ9BXN6 97 aa13.44□□□□□ -0.26
BRAF-201ENST00000288602 SPANXCQ9NY87 97 aa13.44□□□□□ -0.26
BRAF-201ENST00000288602 KRTAP24-1Q3LI83 254 aa13.43□□□□□ -0.26
BRAF-201ENST00000288602 Q8NAQ8 132 aa13.43□□□□□ -0.26
BRAF-201ENST00000288602 IGHV3-33P01772 117 aa13.42□□□□□ -0.26
BRAF-201ENST00000288602 DAD1P61803 113 aa13.42□□□□□ -0.26
BRAF-201ENST00000288602 A0A0B4J2C4 111 aa13.4□□□□□ -0.26
BRAF-201ENST00000288602 TCL1BO95988 128 aa13.4□□□□□ -0.26
BRAF-201ENST00000288602 SCGB1C2P0DMR2 95 aa13.4□□□□□ -0.26
BRAF-201ENST00000288602 CLPSL2Q6UWE3 100 aa13.4□□□□□ -0.26
BRAF-201ENST00000288602 HTN3P15516 51 aa13.4□□□□□ -0.26
BRAF-201ENST00000288602 PRIMA1Q86XR5 153 aa13.4□□□□□ -0.26
BRAF-201ENST00000288602 CMYA5Q8N3K9 4069 aa13.4□□□□□ -0.26
BRAF-201ENST00000288602 ERG28Q9UKR5 140 aa13.4□□□□□ -0.26
BRAF-201ENST00000288602 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.39□□□□□ -0.27
BRAF-201ENST00000288602 A0A1B0GV72 72 aa13.39□□□□□ -0.27
BRAF-201ENST00000288602 WIPF1O43516 503 aa13.39□□□□□ -0.27
BRAF-201ENST00000288602 Q1RN00 199 aa13.39□□□□□ -0.27
BRAF-201ENST00000288602 TOMM7Q9P0U1 55 aa13.39□□□□□ -0.27
BRAF-201ENST00000288602 TRAV26-1A0A087WT03 109 aa13.38□□□□□ -0.27
BRAF-201ENST00000288602 KRTAP10-11P60412 298 aa13.38□□□□□ -0.27
BRAF-201ENST00000288602 RNF183Q96D59 192 aa13.38□□□□□ -0.27
BRAF-201ENST00000288602 MIFP14174 115 aa13.37□□□□□ -0.27
BRAF-201ENST00000288602 C5orf38Q86SI9 138 aa13.37□□□□□ -0.27
BRAF-201ENST00000288602 Q8N3U1 123 aa13.37□□□□□ -0.27
BRAF-201ENST00000288602 CIRBPQ14011 172 aaKnown RBP13.37□□□□□ -0.27
BRAF-201ENST00000288602 MEIG1Q5JSS6 88 aa13.37□□□□□ -0.27
BRAF-201ENST00000288602 TIMM17BO60830 172 aa13.36□□□□□ -0.27
BRAF-201ENST00000288602 MAST4O15021 2626 aa13.36□□□□□ -0.27
BRAF-201ENST00000288602 IGHV3OR16-9A0A0B4J2B5 98 aa13.35□□□□□ -0.27
BRAF-201ENST00000288602 LINC00959A0A1B0GUT2 108 aa13.35□□□□□ -0.27
BRAF-201ENST00000288602 RETNQ9HD89 108 aa13.35□□□□□ -0.27
BRAF-201ENST00000288602 ATP5G1P05496 136 aa13.34□□□□□ -0.27
BRAF-201ENST00000288602 SMCPP49901 116 aaPredicted RBP13.34□□□□□ -0.27
BRAF-201ENST00000288602 CKS1BP61024 79 aa13.34□□□□□ -0.27
BRAF-201ENST00000288602 LINC00308Q8TCZ7 52 aa13.34□□□□□ -0.27
BRAF-201ENST00000288602 XCL1P47992 114 aa13.34□□□□□ -0.27
BRAF-201ENST00000288602 FOXI1Q12951 378 aa13.34□□□□□ -0.27
BRAF-201ENST00000288602 COX7B2Q8TF08 81 aa13.34□□□□□ -0.27
BRAF-201ENST00000288602 SPART-AS1P0CW21 52 aa13.33□□□□□ -0.28
BRAF-201ENST00000288602 SOSTDC1Q6X4U4 206 aa13.33□□□□□ -0.28
BRAF-201ENST00000288602 C3orf56Q8N813 242 aa13.33□□□□□ -0.28
BRAF-201ENST00000288602 LYRM7Q5U5X0 104 aa13.32□□□□□ -0.28
BRAF-201ENST00000288602 TRIAP1O43715 76 aa13.31□□□□□ -0.28
BRAF-201ENST00000288602 IFITM1P13164 125 aa13.31□□□□□ -0.28
BRAF-201ENST00000288602 A0A1B0GUV1 79 aa13.31□□□□□ -0.28
BRAF-201ENST00000288602 CYSRT1A8MQ03 144 aa13.31□□□□□ -0.28
BRAF-201ENST00000288602 C11orf68Q9H3H3 251 aaKnown RBP13.31□□□□□ -0.28
BRAF-201ENST00000288602 TRBV20-1A0A075B6N2 111 aa13.3□□□□□ -0.28
BRAF-201ENST00000288602 A0A087WZ39 114 aa13.3□□□□□ -0.28
BRAF-201ENST00000288602 LINC00269Q8N2A0 174 aa13.3□□□□□ -0.28
BRAF-201ENST00000288602 CDIP1Q9H305 208 aa13.3□□□□□ -0.28
BRAF-201ENST00000288602 RPL13AP40429 203 aaKnown RBP13.28□□□□□ -0.28
BRAF-201ENST00000288602 HERV-K104P63124 156 aa13.28□□□□□ -0.28
BRAF-201ENST00000288602 IGLV10-54A0A075B6I4 117 aa13.28□□□□□ -0.28
BRAF-201ENST00000288602 ICOSQ9Y6W8 199 aa13.28□□□□□ -0.28
BRAF-201ENST00000288602 SS18Q15532 418 aa13.27□□□□□ -0.29
BRAF-201ENST00000288602 ANGP03950 147 aaKnown RBP13.27□□□□□ -0.29
BRAF-201ENST00000288602 TRBV30A0A0K0K1B3 111 aa13.25□□□□□ -0.29
BRAF-201ENST00000288602 MT-ATP8P03928 68 aa13.25□□□□□ -0.29
BRAF-201ENST00000288602 TENM3Q9P273 2699 aa13.25□□□□□ -0.29
BRAF-201ENST00000288602 COL6A5A8TX70 2615 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms