RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 NDUFC2-KCTD14E9PQ53 114 aa9.3□□□□□ -0.92
SLC6A1-201ENST00000287766 K7EQG2 157 aa9.3□□□□□ -0.92
SLC6A1-201ENST00000287766 CAMK2N2Q96S95 79 aa9.3□□□□□ -0.92
SLC6A1-201ENST00000287766 KALRNO60229 2985 aa9.3□□□□□ -0.92
SLC6A1-201ENST00000287766 CNFNQ9BYD5 112 aa9.3□□□□□ -0.92
SLC6A1-201ENST00000287766 LOC107984640A0A0U1RRK4 108 aa9.29□□□□□ -0.92
SLC6A1-201ENST00000287766 H7C423 109 aa9.29□□□□□ -0.92
SLC6A1-201ENST00000287766 TIRAPP58753 221 aa9.29□□□□□ -0.92
SLC6A1-201ENST00000287766 DMXL2Q8TDJ6 3036 aa9.29□□□□□ -0.92
SLC6A1-201ENST00000287766 ETDCA0A1B0GVM5 59 aa9.29□□□□□ -0.92
SLC6A1-201ENST00000287766 LST1O00453 97 aa9.28□□□□□ -0.92
SLC6A1-201ENST00000287766 DEFB113Q30KQ7 82 aa9.28□□□□□ -0.92
SLC6A1-201ENST00000287766 FAM19A5Q7Z5A7 132 aaPredicted RBP9.28□□□□□ -0.92
SLC6A1-201ENST00000287766 PRORYQ9H606 182 aa9.28□□□□□ -0.92
SLC6A1-201ENST00000287766 IGKV2D-24A0A075B6R9 120 aa9.28□□□□□ -0.92
SLC6A1-201ENST00000287766 BPY2O14599 106 aa9.28□□□□□ -0.92
SLC6A1-201ENST00000287766 TIMM17BO60830 172 aa9.28□□□□□ -0.92
SLC6A1-201ENST00000287766 PRR4Q16378 134 aa9.28□□□□□ -0.92
SLC6A1-201ENST00000287766 LRRC75A-AS1Q8N1F1 130 aa9.28□□□□□ -0.92
SLC6A1-201ENST00000287766 LINC00467Q9BRT7 94 aa9.27□□□□□ -0.93
SLC6A1-201ENST00000287766 PPDPFQ9H3Y8 114 aa9.27□□□□□ -0.93
SLC6A1-201ENST00000287766 M0QY20 66 aa9.27□□□□□ -0.93
SLC6A1-201ENST00000287766 C1orf195Q5TG92 126 aa9.27□□□□□ -0.93
SLC6A1-201ENST00000287766 UBE2DNLQ8IWF7 75 aa9.27□□□□□ -0.93
SLC6A1-201ENST00000287766 A0A087WVE0 104 aa9.26□□□□□ -0.93
SLC6A1-201ENST00000287766 DIRC1Q969H9 104 aa9.26□□□□□ -0.93
SLC6A1-201ENST00000287766 TACC2O95359 2948 aa9.25□□□□□ -0.93
SLC6A1-201ENST00000287766 DCANP1Q8TF63 244 aa9.25□□□□□ -0.93
SLC6A1-201ENST00000287766 MAP6D1Q9H9H5 199 aa9.25□□□□□ -0.93
SLC6A1-201ENST00000287766 Q6Q795 121 aa9.24□□□□□ -0.93
SLC6A1-201ENST00000287766 SPAG11BQ08648 103 aa9.24□□□□□ -0.93
SLC6A1-201ENST00000287766 DEFB121Q5J5C9 76 aa9.24□□□□□ -0.93
SLC6A1-201ENST00000287766 Q6ZSV7 163 aa9.24□□□□□ -0.93
SLC6A1-201ENST00000287766 Q6ZTI0 123 aa9.24□□□□□ -0.93
SLC6A1-201ENST00000287766 KLLNB2CW77 178 aa9.23□□□□□ -0.93
SLC6A1-201ENST00000287766 PDE6GP18545 87 aa9.23□□□□□ -0.93
SLC6A1-201ENST00000287766 UBE2D1P51668 147 aa9.23□□□□□ -0.93
SLC6A1-201ENST00000287766 TMEM263Q8WUH6 116 aaKnown RBP9.23□□□□□ -0.93
SLC6A1-201ENST00000287766 DEFB4AO15263 64 aa9.23□□□□□ -0.93
SLC6A1-201ENST00000287766 CRYGDP07320 174 aa9.23□□□□□ -0.93
SLC6A1-201ENST00000287766 POLR2KP53803 58 aaKnown RBP9.23□□□□□ -0.93
SLC6A1-201ENST00000287766 ATMQ13315 3056 aa9.22□□□□□ -0.93
SLC6A1-201ENST00000287766 SOSTDC1Q6X4U4 206 aa9.22□□□□□ -0.93
SLC6A1-201ENST00000287766 IGLV1-40P01703 118 aa9.22□□□□□ -0.93
SLC6A1-201ENST00000287766 POM121L12Q8N7R1 296 aa9.22□□□□□ -0.93
SLC6A1-201ENST00000287766 LRCOL1A6NCL2 159 aa9.22□□□□□ -0.93
SLC6A1-201ENST00000287766 CHKB-CPT1BH3BT56 60 aa9.22□□□□□ -0.93
SLC6A1-201ENST00000287766 C6orf99Q4VX62 202 aa9.22□□□□□ -0.93
SLC6A1-201ENST00000287766 CDIP1Q9H305 208 aa9.22□□□□□ -0.93
SLC6A1-201ENST00000287766 IGLV2-18A0A075B6J9 118 aa9.21□□□□□ -0.93
SLC6A1-201ENST00000287766 KLK12Q9UKR0 248 aa9.21□□□□□ -0.93
SLC6A1-201ENST00000287766 TRBV27A0A0K0K1C4 114 aa9.21□□□□□ -0.94
SLC6A1-201ENST00000287766 COX8CQ7Z4L0 72 aa9.21□□□□□ -0.94
SLC6A1-201ENST00000287766 IGHV4-31P0DP07 118 aa9.21□□□□□ -0.94
SLC6A1-201ENST00000287766 ATP5EP2Q5VTU8 51 aa9.21□□□□□ -0.94
SLC6A1-201ENST00000287766 LINC00526Q96FQ7 95 aa9.21□□□□□ -0.94
SLC6A1-201ENST00000287766 PSMG3-AS1Q96PY0 264 aa9.2□□□□□ -0.94
SLC6A1-201ENST00000287766 UBE2D3P61077 147 aa9.2□□□□□ -0.94
SLC6A1-201ENST00000287766 UBE2D2P62837 147 aa9.2□□□□□ -0.94
SLC6A1-201ENST00000287766 ZNF580Q9UK33 172 aa9.2□□□□□ -0.94
SLC6A1-201ENST00000287766 TSHBP01222 138 aa9.2□□□□□ -0.94
SLC6A1-201ENST00000287766 ZZEF1O43149 2961 aa9.2□□□□□ -0.94
SLC6A1-201ENST00000287766 CXCL5P42830 114 aa9.19□□□□□ -0.94
SLC6A1-201ENST00000287766 KRTAP10-9P60411 292 aa9.19□□□□□ -0.94
SLC6A1-201ENST00000287766 Q6YL49 198 aa9.19□□□□□ -0.94
SLC6A1-201ENST00000287766 NDUFA1O15239 70 aa9.19□□□□□ -0.94
SLC6A1-201ENST00000287766 WFDC10AQ9H1F0 79 aa9.19□□□□□ -0.94
SLC6A1-201ENST00000287766 SMIM26A0A096LP01 95 aa9.19□□□□□ -0.94
SLC6A1-201ENST00000287766 COX7BP24311 80 aa9.19□□□□□ -0.94
SLC6A1-201ENST00000287766 ZMAT4Q9H898 229 aa9.19□□□□□ -0.94
SLC6A1-201ENST00000287766 COL27A1Q8IZC6 1860 aaPredicted RBP9.19□□□□□ -0.94
SLC6A1-201ENST00000287766 DMXL1Q9Y485 3027 aa9.18□□□□□ -0.94
SLC6A1-201ENST00000287766 NDUFB1O75438 58 aa9.18□□□□□ -0.94
SLC6A1-201ENST00000287766 DEFB114Q30KQ6 69 aa9.18□□□□□ -0.94
SLC6A1-201ENST00000287766 DNAJC9-AS1A6NH13 148 aa9.18□□□□□ -0.94
SLC6A1-201ENST00000287766 IGIPA6NJ69 53 aa9.18□□□□□ -0.94
SLC6A1-201ENST00000287766 TSPEAR-AS2P59090 65 aa9.18□□□□□ -0.94
SLC6A1-201ENST00000287766 ZNF702PQ9H963 129 aa9.17□□□□□ -0.94
SLC6A1-201ENST00000287766 LRBAP50851 2863 aa9.17□□□□□ -0.94
SLC6A1-201ENST00000287766 LINC00269Q8N2A0 174 aa9.17□□□□□ -0.94
SLC6A1-201ENST00000287766 C4orf3Q8WVX3 66 aa9.17□□□□□ -0.94
SLC6A1-201ENST00000287766 C16orf74Q96GX8 76 aa9.17□□□□□ -0.94
SLC6A1-201ENST00000287766 XAGE1AQ9HD64 81 aa9.17□□□□□ -0.94
SLC6A1-201ENST00000287766 CSDC2Q9Y534 153 aaKnown RBP9.17□□□□□ -0.94
SLC6A1-201ENST00000287766 MUC3AQ02505 3323 aa9.17□□□□□ -0.94
SLC6A1-201ENST00000287766 TRBV10-1A0A0K0K1A3 114 aa9.17□□□□□ -0.94
SLC6A1-201ENST00000287766 TMEM89A2RUT3 159 aa9.17□□□□□ -0.94
SLC6A1-201ENST00000287766 C3orf84H3BNL1 204 aa9.16□□□□□ -0.94
SLC6A1-201ENST00000287766 CCKP06307 115 aa9.16□□□□□ -0.94
SLC6A1-201ENST00000287766 FAM19A3Q7Z5A8 133 aa9.16□□□□□ -0.94
SLC6A1-201ENST00000287766 TRBV6-5A0A0K0K1A5 114 aa9.16□□□□□ -0.94
SLC6A1-201ENST00000287766 C9orf85Q96MD7 179 aa9.16□□□□□ -0.94
SLC6A1-201ENST00000287766 Q6ZQY7 126 aa9.16□□□□□ -0.94
SLC6A1-201ENST00000287766 SMIM11BQ8TCY0 68 aa9.16□□□□□ -0.94
SLC6A1-201ENST00000287766 H0Y9J4 135 aa9.15□□□□□ -0.94
SLC6A1-201ENST00000287766 TNRC18O15417 2968 aaPredicted RBP9.15□□□□□ -0.94
SLC6A1-201ENST00000287766 H3BQ85 93 aa9.15□□□□□ -0.94
SLC6A1-201ENST00000287766 C1orf158Q8N1D5 194 aa9.15□□□□□ -0.94
SLC6A1-201ENST00000287766 ODF3Q96PU9 254 aa9.15□□□□□ -0.94
SLC6A1-201ENST00000287766 IGLV4-69A0A075B6H9 119 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms