RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 CRYGAP11844 174 aa9.82□□□□□ -0.84
SMARCA5-201ENST00000283131 K7EQG2 157 aa9.82□□□□□ -0.84
SMARCA5-201ENST00000283131 LINC00694P0DN24 101 aa9.82□□□□□ -0.84
SMARCA5-201ENST00000283131 PRLHP81277 87 aa9.82□□□□□ -0.84
SMARCA5-201ENST00000283131 CCDC140Q96MF4 163 aa9.82□□□□□ -0.84
SMARCA5-201ENST00000283131 CLUHP3Q96NS8 147 aa9.81□□□□□ -0.84
SMARCA5-201ENST00000283131 Q6JHZ5 121 aa9.8□□□□□ -0.84
SMARCA5-201ENST00000283131 IGLV1-47P01700 117 aa9.8□□□□□ -0.84
SMARCA5-201ENST00000283131 C2CD3Q4AC94 2353 aa9.8□□□□□ -0.84
SMARCA5-201ENST00000283131 Q6YL49 198 aa9.8□□□□□ -0.84
SMARCA5-201ENST00000283131 LIMD2Q9BT23 127 aa9.8□□□□□ -0.84
SMARCA5-201ENST00000283131 M0QY20 66 aa9.79□□□□□ -0.84
SMARCA5-201ENST00000283131 ODF3BA8MYP8 253 aa9.79□□□□□ -0.84
SMARCA5-201ENST00000283131 CCDC179H3BU77 68 aa9.79□□□□□ -0.84
SMARCA5-201ENST00000283131 NTM-AS1Q6ZSK4 140 aa9.79□□□□□ -0.84
SMARCA5-201ENST00000283131 hDV103S1A0JD37 113 aa9.79□□□□□ -0.84
SMARCA5-201ENST00000283131 SPINT4Q6UDR6 99 aa9.79□□□□□ -0.84
SMARCA5-201ENST00000283131 C7orf65Q6ZTY9 151 aa9.79□□□□□ -0.84
SMARCA5-201ENST00000283131 U3KQA8 63 aa9.79□□□□□ -0.84
SMARCA5-201ENST00000283131 ZNF80P51504 273 aaPredicted RBP9.79□□□□□ -0.84
SMARCA5-201ENST00000283131 CUL9Q8IWT3 2517 aa9.78□□□□□ -0.84
SMARCA5-201ENST00000283131 LINC00959A0A1B0GUT2 108 aa9.78□□□□□ -0.84
SMARCA5-201ENST00000283131 E7EUB6 86 aa9.78□□□□□ -0.84
SMARCA5-201ENST00000283131 SBSPONQ8IVN8 264 aa9.77□□□□□ -0.85
SMARCA5-201ENST00000283131 LINC01556Q5JQF7 62 aa9.77□□□□□ -0.85
SMARCA5-201ENST00000283131 IGLV2-8P01709 118 aa9.76□□□□□ -0.85
SMARCA5-201ENST00000283131 COL4A5P29400 1685 aa9.76□□□□□ -0.85
SMARCA5-201ENST00000283131 RNASE3P12724 160 aaKnown RBP9.76□□□□□ -0.85
SMARCA5-201ENST00000283131 A0A1B0GU69 56 aa9.76□□□□□ -0.85
SMARCA5-201ENST00000283131 CEP192Q8TEP8 1941 aa9.75□□□□□ -0.85
SMARCA5-201ENST00000283131 IGKV2D-30A0A075B6S6 120 aa9.75□□□□□ -0.85
SMARCA5-201ENST00000283131 IGKV2-30P06310 120 aa9.75□□□□□ -0.85
SMARCA5-201ENST00000283131 Q8IZM0 81 aa9.75□□□□□ -0.85
SMARCA5-201ENST00000283131 PCNX3Q9H6A9 2034 aa9.75□□□□□ -0.85
SMARCA5-201ENST00000283131 IGFL2Q6UWQ7 119 aa9.75□□□□□ -0.85
SMARCA5-201ENST00000283131 C2orf48Q96LS8 159 aa9.75□□□□□ -0.85
SMARCA5-201ENST00000283131 NOTCH4Q99466 2003 aa9.74□□□□□ -0.85
SMARCA5-201ENST00000283131 PROK1P58294 105 aa9.74□□□□□ -0.85
SMARCA5-201ENST00000283131 A8MZ25 164 aa9.74□□□□□ -0.85
SMARCA5-201ENST00000283131 Q9BRP9 147 aa9.74□□□□□ -0.85
SMARCA5-201ENST00000283131 CYSRT1A8MQ03 144 aa9.74□□□□□ -0.85
SMARCA5-201ENST00000283131 ACYP2P14621 99 aa9.74□□□□□ -0.85
SMARCA5-201ENST00000283131 MYO9AB2RTY4 2548 aa9.73□□□□□ -0.85
SMARCA5-201ENST00000283131 IGLV2-14P01704 120 aa9.73□□□□□ -0.85
SMARCA5-201ENST00000283131 MAPKAPK5-AS1Q8N8E1 139 aa9.73□□□□□ -0.85
SMARCA5-201ENST00000283131 ZNF702PQ9H963 129 aa9.73□□□□□ -0.85
SMARCA5-201ENST00000283131 BDP1A6H8Y1 2624 aa9.73□□□□□ -0.85
SMARCA5-201ENST00000283131 IGLV2-11P01706 119 aa9.73□□□□□ -0.85
SMARCA5-201ENST00000283131 ANKHD1Q8IWZ3 2542 aaKnown RBP9.72□□□□□ -0.85
SMARCA5-201ENST00000283131 MSMPQ1L6U9 139 aa9.72□□□□□ -0.85
SMARCA5-201ENST00000283131 SIPA1L1O43166 1804 aa9.72□□□□□ -0.85
SMARCA5-201ENST00000283131 HCG22E2RYF7 251 aa9.71□□□□□ -0.85
SMARCA5-201ENST00000283131 FRMD6-AS1P0C7T7 363 aa9.71□□□□□ -0.85
SMARCA5-201ENST00000283131 TP73-AS1Q9UF72 201 aa9.71□□□□□ -0.85
SMARCA5-201ENST00000283131 MRGPRG-AS1Q2M3A8 158 aa9.71□□□□□ -0.86
SMARCA5-201ENST00000283131 C6orf223Q8N319 242 aa9.71□□□□□ -0.86
SMARCA5-201ENST00000283131 YPEL4Q96NS1 127 aa9.71□□□□□ -0.86
SMARCA5-201ENST00000283131 Q8N814 137 aa9.7□□□□□ -0.86
SMARCA5-201ENST00000283131 SIP14410 1827 aa9.7□□□□□ -0.86
SMARCA5-201ENST00000283131 LINC00575Q6W349 94 aa9.69□□□□□ -0.86
SMARCA5-201ENST00000283131 EGFEM1PQ0D2K5 195 aa9.69□□□□□ -0.86
SMARCA5-201ENST00000283131 RAI1Q7Z5J4 1906 aaPredicted RBP9.69□□□□□ -0.86
SMARCA5-201ENST00000283131 GDF5OSQ5U4N7 250 aa9.69□□□□□ -0.86
SMARCA5-201ENST00000283131 Q8N3U1 123 aa9.69□□□□□ -0.86
SMARCA5-201ENST00000283131 TMEM254Q8TBM7 123 aa9.69□□□□□ -0.86
SMARCA5-201ENST00000283131 PLA2G2EQ9NZK7 142 aa9.69□□□□□ -0.86
SMARCA5-201ENST00000283131 TSHBP01222 138 aa9.68□□□□□ -0.86
SMARCA5-201ENST00000283131 Q6ZSV7 163 aa9.68□□□□□ -0.86
SMARCA5-201ENST00000283131 TANC1Q9C0D5 1861 aa9.68□□□□□ -0.86
SMARCA5-201ENST00000283131 FBXL19-AS1Q494R0 122 aa9.68□□□□□ -0.86
SMARCA5-201ENST00000283131 P0C879 139 aa9.67□□□□□ -0.86
SMARCA5-201ENST00000283131 KRTAP27-1Q3LI81 207 aa9.67□□□□□ -0.86
SMARCA5-201ENST00000283131 A0A087WSZ3 146 aa9.67□□□□□ -0.86
SMARCA5-201ENST00000283131 TRBV10-3A0A0K0K1G6 114 aa9.66□□□□□ -0.86
SMARCA5-201ENST00000283131 LY6G6DO95868 133 aa9.66□□□□□ -0.86
SMARCA5-201ENST00000283131 CRIP2P52943 208 aaPredicted RBP9.66□□□□□ -0.86
SMARCA5-201ENST00000283131 LMO4P61968 165 aa9.66□□□□□ -0.86
SMARCA5-201ENST00000283131 C1orf64Q8NEQ6 169 aa9.66□□□□□ -0.86
SMARCA5-201ENST00000283131 DEFB116Q30KQ4 102 aa9.65□□□□□ -0.86
SMARCA5-201ENST00000283131 UNQ6190/PRO20217Q6UXQ8 127 aa9.64□□□□□ -0.87
SMARCA5-201ENST00000283131 CXCL6P80162 114 aa9.64□□□□□ -0.87
SMARCA5-201ENST00000283131 C1orf134Q5TEV5 83 aa9.64□□□□□ -0.87
SMARCA5-201ENST00000283131 COL4A6Q14031 1691 aa9.64□□□□□ -0.87
SMARCA5-201ENST00000283131 U3KQK5 164 aa9.64□□□□□ -0.87
SMARCA5-201ENST00000283131 MBD6Q96DN6 1003 aa9.63□□□□□ -0.87
SMARCA5-201ENST00000283131 ACANP16112 2415 aa9.63□□□□□ -0.87
SMARCA5-201ENST00000283131 CDC42SE2Q9NRR3 84 aa9.63□□□□□ -0.87
SMARCA5-201ENST00000283131 XGP55808 180 aa9.63□□□□□ -0.87
SMARCA5-201ENST00000283131 Q6ZTC4 211 aa9.62□□□□□ -0.87
SMARCA5-201ENST00000283131 ZFHX2Q9C0A1 2572 aaPredicted RBP9.62□□□□□ -0.87
SMARCA5-201ENST00000283131 ALPK3Q96L96 1907 aa9.62□□□□□ -0.87
SMARCA5-201ENST00000283131 CHCHD7Q9BUK0 85 aa9.62□□□□□ -0.87
SMARCA5-201ENST00000283131 PTPRSQ13332 1948 aa9.62□□□□□ -0.87
SMARCA5-201ENST00000283131 C8orf87E5RJ46 101 aa9.61□□□□□ -0.87
SMARCA5-201ENST00000283131 KIAA1549LQ6ZVL6 1849 aa9.61□□□□□ -0.87
SMARCA5-201ENST00000283131 PSMG3-AS1Q96PY0 264 aa9.61□□□□□ -0.87
SMARCA5-201ENST00000283131 C9orf116Q5BN46 136 aaPredicted RBP9.6□□□□□ -0.87
SMARCA5-201ENST00000283131 ATP11AUNQ6ZP68 121 aa9.6□□□□□ -0.87
SMARCA5-201ENST00000283131 F8WDY8 70 aa9.6□□□□□ -0.87
SMARCA5-201ENST00000283131 Q6ZS46 218 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms