RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 FAM104AQ969W3 186 aa7.73□□□□□ -1.17
GGPS1-201ENST00000282841 KLK5Q9Y337 293 aaPredicted RBP7.73□□□□□ -1.17
GGPS1-201ENST00000282841 TENM2Q9NT68 2774 aa7.72□□□□□ -1.17
GGPS1-201ENST00000282841 IGHV3-64A0A075B6Q5 118 aa7.72□□□□□ -1.17
GGPS1-201ENST00000282841 DPM2O94777 84 aa7.72□□□□□ -1.17
GGPS1-201ENST00000282841 GYPEP15421 78 aa7.72□□□□□ -1.17
GGPS1-201ENST00000282841 DAD1P61803 113 aa7.72□□□□□ -1.17
GGPS1-201ENST00000282841 SBSPONQ8IVN8 264 aa7.72□□□□□ -1.17
GGPS1-201ENST00000282841 ZMAT4Q9H898 229 aa7.71□□□□□ -1.17
GGPS1-201ENST00000282841 IGLV4-3A0A075B6K6 122 aa7.71□□□□□ -1.18
GGPS1-201ENST00000282841 C11orf86A6NJI1 115 aa7.71□□□□□ -1.18
GGPS1-201ENST00000282841 UBE2D3P61077 147 aa7.71□□□□□ -1.18
GGPS1-201ENST00000282841 UBE2D2P62837 147 aa7.71□□□□□ -1.18
GGPS1-201ENST00000282841 HERVK_113P63121 156 aa7.71□□□□□ -1.18
GGPS1-201ENST00000282841 C10orf126Q8N4M7 172 aa7.71□□□□□ -1.18
GGPS1-201ENST00000282841 ATP6V0E2Q8NHE4 81 aa7.71□□□□□ -1.18
GGPS1-201ENST00000282841 CHCHD5Q9BSY4 110 aa7.71□□□□□ -1.18
GGPS1-201ENST00000282841 IGKV3OR2-268A0A0C4DH90 116 aa7.7□□□□□ -1.18
GGPS1-201ENST00000282841 E9PLD3 99 aa7.7□□□□□ -1.18
GGPS1-201ENST00000282841 SRSF9Q13242 221 aaKnown RBP eCLIP7.7□□□□□ -1.18
GGPS1-201ENST00000282841 RHOHQ15669 191 aa7.7□□□□□ -1.18
GGPS1-201ENST00000282841 A0A0J9YXV3 536 aa7.7□□□□□ -1.18
GGPS1-201ENST00000282841 IGLL5B9A064 214 aa7.7□□□□□ -1.18
GGPS1-201ENST00000282841 F8VRH5 84 aa7.7□□□□□ -1.18
GGPS1-201ENST00000282841 C9orf153Q5TBE3 101 aa7.7□□□□□ -1.18
GGPS1-201ENST00000282841 IGLV4-69A0A075B6H9 119 aa7.69□□□□□ -1.18
GGPS1-201ENST00000282841 FAM236AA0A1B0GUQ0 79 aa7.69□□□□□ -1.18
GGPS1-201ENST00000282841 FAM236BA0A1B0GV22 79 aa7.69□□□□□ -1.18
GGPS1-201ENST00000282841 PPDPFLQ8WWR9 84 aa7.69□□□□□ -1.18
GGPS1-201ENST00000282841 K7EIL1 84 aa7.69□□□□□ -1.18
GGPS1-201ENST00000282841 PMVKQ15126 192 aa7.69□□□□□ -1.18
GGPS1-201ENST00000282841 TMEM170BQ5T4T1 132 aa7.69□□□□□ -1.18
GGPS1-201ENST00000282841 UBE2D4Q9Y2X8 147 aa7.69□□□□□ -1.18
GGPS1-201ENST00000282841 TRBV6-4A0A1B0GX49 114 aa7.69□□□□□ -1.18
GGPS1-201ENST00000282841 TMEM262E9PQX1 116 aa7.69□□□□□ -1.18
GGPS1-201ENST00000282841 Q8N3U1 123 aa7.69□□□□□ -1.18
GGPS1-201ENST00000282841 CARD19Q96LW7 228 aa7.69□□□□□ -1.18
GGPS1-201ENST00000282841 MEGF8Q7Z7M0 2845 aa7.68□□□□□ -1.18
GGPS1-201ENST00000282841 MIFP14174 115 aa7.68□□□□□ -1.18
GGPS1-201ENST00000282841 DGAT2L7PQ6IED9 249 aa7.68□□□□□ -1.18
GGPS1-201ENST00000282841 MAPKAPK5-AS1Q8N8E1 139 aa7.68□□□□□ -1.18
GGPS1-201ENST00000282841 VSIG2Q96IQ7 327 aa7.68□□□□□ -1.18
GGPS1-201ENST00000282841 HUWE1Q7Z6Z7 4374 aaKnown RBP7.68□□□□□ -1.18
GGPS1-201ENST00000282841 A0A0J9YWU9 116 aa7.68□□□□□ -1.18
GGPS1-201ENST00000282841 A0A1B0GX51 115 aa7.68□□□□□ -1.18
GGPS1-201ENST00000282841 PAX4O43316 350 aa7.68□□□□□ -1.18
GGPS1-201ENST00000282841 LINC00612Q8N6U2 182 aa7.68□□□□□ -1.18
GGPS1-201ENST00000282841 TIMM17AQ99595 171 aa7.68□□□□□ -1.18
GGPS1-201ENST00000282841 TRBV10-1A0A0K0K1A3 114 aa7.67□□□□□ -1.18
GGPS1-201ENST00000282841 SPART-AS1P0CW21 52 aa7.67□□□□□ -1.18
GGPS1-201ENST00000282841 SMCPP49901 116 aaPredicted RBP7.67□□□□□ -1.18
GGPS1-201ENST00000282841 TRAV12-1A0A0B4J245 112 aa7.67□□□□□ -1.18
GGPS1-201ENST00000282841 TMEM141Q96I45 108 aa7.67□□□□□ -1.18
GGPS1-201ENST00000282841 PRO0628Q9UI54 55 aa7.67□□□□□ -1.18
GGPS1-201ENST00000282841 TRAV13-1A0A0B4J241 112 aa7.66□□□□□ -1.18
GGPS1-201ENST00000282841 A0A0U1RRA0 63 aa7.66□□□□□ -1.18
GGPS1-201ENST00000282841 LYRM9A8MSI8 78 aa7.66□□□□□ -1.18
GGPS1-201ENST00000282841 A8MZ25 164 aa7.66□□□□□ -1.18
GGPS1-201ENST00000282841 DAZ4Q86SG3 579 aaKnown RBP7.66□□□□□ -1.18
GGPS1-201ENST00000282841 CHAC1Q9BUX1 264 aa7.66□□□□□ -1.18
GGPS1-201ENST00000282841 DAZ3Q9NR90 486 aaKnown RBP7.66□□□□□ -1.18
GGPS1-201ENST00000282841 PRO0255Q9UI72 69 aa7.66□□□□□ -1.18
GGPS1-201ENST00000282841 LYSTQ99698 3801 aa7.66□□□□□ -1.18
GGPS1-201ENST00000282841 MALP21145 153 aa7.66□□□□□ -1.18
GGPS1-201ENST00000282841 NANOS2P60321 138 aaKnown RBP7.66□□□□□ -1.18
GGPS1-201ENST00000282841 C12orf74Q32Q52 190 aa7.66□□□□□ -1.18
GGPS1-201ENST00000282841 Q6ZTC4 211 aa7.66□□□□□ -1.18
GGPS1-201ENST00000282841 PLNP26678 52 aa7.65□□□□□ -1.18
GGPS1-201ENST00000282841 CLPSL2Q6UWE3 100 aa7.65□□□□□ -1.18
GGPS1-201ENST00000282841 ATP5G1P05496 136 aa7.65□□□□□ -1.18
GGPS1-201ENST00000282841 IGLV4-60A0A075B6I1 120 aa7.65□□□□□ -1.19
GGPS1-201ENST00000282841 UBE2L6O14933 153 aa7.65□□□□□ -1.19
GGPS1-201ENST00000282841 TEN1Q86WV5 123 aa7.64□□□□□ -1.19
GGPS1-201ENST00000282841 TMEM243Q9BU79 118 aa7.64□□□□□ -1.19
GGPS1-201ENST00000282841 TRBV6-8A0A0A6YYG3 113 aa7.64□□□□□ -1.19
GGPS1-201ENST00000282841 TRAV8-3A0A0A6YYJ7 113 aa7.64□□□□□ -1.19
GGPS1-201ENST00000282841 TSPEAR-AS2P59090 65 aa7.64□□□□□ -1.19
GGPS1-201ENST00000282841 COX6A2Q02221 97 aa7.64□□□□□ -1.19
GGPS1-201ENST00000282841 Q6Q795 121 aa7.64□□□□□ -1.19
GGPS1-201ENST00000282841 TRBV25-1A0A075B6N4 114 aa7.63□□□□□ -1.19
GGPS1-201ENST00000282841 TGP01266 2768 aa7.63□□□□□ -1.19
GGPS1-201ENST00000282841 PRKDCP78527 4128 aaKnown RBP7.62□□□□□ -1.19
GGPS1-201ENST00000282841 FAM236DA0A1B0GTK5 79 aa7.62□□□□□ -1.19
GGPS1-201ENST00000282841 FAM236CP0DP71 79 aa7.62□□□□□ -1.19
GGPS1-201ENST00000282841 SFTA2Q6UW10 78 aa7.62□□□□□ -1.19
GGPS1-201ENST00000282841 AMELXQ99217 191 aa7.62□□□□□ -1.19
GGPS1-201ENST00000282841 PYGO1Q9Y3Y4 419 aa7.62□□□□□ -1.19
GGPS1-201ENST00000282841 ZNF22P17026 224 aaPredicted RBP7.61□□□□□ -1.19
GGPS1-201ENST00000282841 RPS28P62857 69 aaKnown RBP7.61□□□□□ -1.19
GGPS1-201ENST00000282841 PSMB2P49721 201 aa7.61□□□□□ -1.19
GGPS1-201ENST00000282841 C15orf53Q8NAA6 179 aa7.61□□□□□ -1.19
GGPS1-201ENST00000282841 TIRAPP58753 221 aa7.61□□□□□ -1.19
GGPS1-201ENST00000282841 Q5XG85 94 aa7.61□□□□□ -1.19
GGPS1-201ENST00000282841 PLEKHB2Q96CS7 222 aa7.61□□□□□ -1.19
GGPS1-201ENST00000282841 CSMD3Q7Z407 3707 aa7.6□□□□□ -1.19
GGPS1-201ENST00000282841 CDC42SE2Q9NRR3 84 aa7.6□□□□□ -1.19
GGPS1-201ENST00000282841 CDKN2A-AS1Q9UH64 79 aa7.6□□□□□ -1.19
GGPS1-201ENST00000282841 DNAH9Q9NYC9 4486 aa7.6□□□□□ -1.19
GGPS1-201ENST00000282841 LINC00336Q6ZUF6 198 aa7.6□□□□□ -1.19
GGPS1-201ENST00000282841 ANKRD29Q8N6D5 301 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms