RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 Q9H8V8 135 aa5.51□□□□□ -1.53
EPHA4-201ENST00000281821 IGLV4-3A0A075B6K6 122 aa5.51□□□□□ -1.53
EPHA4-201ENST00000281821 E9PLD3 99 aa5.51□□□□□ -1.53
EPHA4-201ENST00000281821 BAALCQ8WXS3 180 aa5.51□□□□□ -1.53
EPHA4-201ENST00000281821 C2orf48Q96LS8 159 aa5.51□□□□□ -1.53
EPHA4-201ENST00000281821 SS18L2Q9UHA2 77 aa5.51□□□□□ -1.53
EPHA4-201ENST00000281821 IGLV4-69A0A075B6H9 119 aa5.51□□□□□ -1.53
EPHA4-201ENST00000281821 B5MCH6 92 aa5.5□□□□□ -1.53
EPHA4-201ENST00000281821 GAGE2AQ6NT46 116 aa5.5□□□□□ -1.53
EPHA4-201ENST00000281821 TAX1BP3O14907 124 aa5.5□□□□□ -1.53
EPHA4-201ENST00000281821 UBE2BP63146 152 aa5.5□□□□□ -1.53
EPHA4-201ENST00000281821 KRTAP10-11P60412 298 aa5.5□□□□□ -1.53
EPHA4-201ENST00000281821 Q6ZUT4 128 aa5.5□□□□□ -1.53
EPHA4-201ENST00000281821 PCP2Q8IVA1 136 aa5.5□□□□□ -1.53
EPHA4-201ENST00000281821 CDC42SE2Q9NRR3 84 aa5.5□□□□□ -1.53
EPHA4-201ENST00000281821 HIST2H2BDQ6DRA6 164 aa5.5□□□□□ -1.53
EPHA4-201ENST00000281821 HIGD1BQ9P298 99 aa5.49□□□□□ -1.53
EPHA4-201ENST00000281821 BPTFQ12830 3046 aa5.49□□□□□ -1.53
EPHA4-201ENST00000281821 COX17Q14061 63 aa5.49□□□□□ -1.53
EPHA4-201ENST00000281821 UBE2D4Q9Y2X8 147 aa5.49□□□□□ -1.53
EPHA4-201ENST00000281821 TIMM17BO60830 172 aa5.49□□□□□ -1.53
EPHA4-201ENST00000281821 C7orf33Q8WU49 177 aa5.49□□□□□ -1.53
EPHA4-201ENST00000281821 TRBV30A0A0K0K1B3 111 aa5.49□□□□□ -1.53
EPHA4-201ENST00000281821 RPL39P62891 51 aaKnown RBP5.49□□□□□ -1.53
EPHA4-201ENST00000281821 LINC00173Q6ZV60 143 aa5.49□□□□□ -1.53
EPHA4-201ENST00000281821 Q8IZM0 81 aa5.49□□□□□ -1.53
EPHA4-201ENST00000281821 CARD19Q96LW7 228 aa5.49□□□□□ -1.53
EPHA4-201ENST00000281821 PRO1854Q9UHT4 67 aa5.49□□□□□ -1.53
EPHA4-201ENST00000281821 LINC00959A0A1B0GUT2 108 aa5.49□□□□□ -1.53
EPHA4-201ENST00000281821 MKI67P46013 3256 aaKnown RBP5.48□□□□□ -1.53
EPHA4-201ENST00000281821 LOC107984640A0A0U1RRK4 108 aa5.48□□□□□ -1.53
EPHA4-201ENST00000281821 ODF1Q14990 250 aa5.48□□□□□ -1.53
EPHA4-201ENST00000281821 NSD1Q96L73 2696 aaPredicted RBP5.48□□□□□ -1.53
EPHA4-201ENST00000281821 ITPR1Q14643 2758 aa5.48□□□□□ -1.53
EPHA4-201ENST00000281821 IGLV10-54A0A075B6I4 117 aa5.48□□□□□ -1.53
EPHA4-201ENST00000281821 NTN5Q8WTR8 489 aaPredicted RBP5.48□□□□□ -1.53
EPHA4-201ENST00000281821 H0YGX0 51 aa5.47□□□□□ -1.53
EPHA4-201ENST00000281821 ANKRD39Q53RE8 183 aa5.47□□□□□ -1.53
EPHA4-201ENST00000281821 SPANXDQ9BXN6 97 aa5.47□□□□□ -1.53
EPHA4-201ENST00000281821 CLPSL2Q6UWE3 100 aa5.47□□□□□ -1.53
EPHA4-201ENST00000281821 PFN2P35080 140 aa5.47□□□□□ -1.53
EPHA4-201ENST00000281821 ZNF625Q96I27 306 aaPredicted RBP5.47□□□□□ -1.53
EPHA4-201ENST00000281821 TMEM126AQ9H061 195 aa5.47□□□□□ -1.53
EPHA4-201ENST00000281821 INAFM2P0DMQ5 153 aa5.46□□□□□ -1.53
EPHA4-201ENST00000281821 YPEL4Q96NS1 127 aa5.46□□□□□ -1.53
EPHA4-201ENST00000281821 SMIM20Q8N5G0 67 aa5.46□□□□□ -1.54
EPHA4-201ENST00000281821 ITPR2Q14571 2701 aa5.46□□□□□ -1.54
EPHA4-201ENST00000281821 A4D1N5 150 aa5.46□□□□□ -1.54
EPHA4-201ENST00000281821 LINC00315P59091 139 aa5.46□□□□□ -1.54
EPHA4-201ENST00000281821 WFDC2Q14508 124 aa5.46□□□□□ -1.54
EPHA4-201ENST00000281821 A0A087WZ39 114 aa5.45□□□□□ -1.54
EPHA4-201ENST00000281821 LINC00336Q6ZUF6 198 aa5.45□□□□□ -1.54
EPHA4-201ENST00000281821 TRACP01848 142 aa5.45□□□□□ -1.54
EPHA4-201ENST00000281821 DNAH10OSP0CZ25 163 aa5.45□□□□□ -1.54
EPHA4-201ENST00000281821 UPK3BQ9BT76 320 aa5.45□□□□□ -1.54
EPHA4-201ENST00000281821 ETDCA0A1B0GVM5 59 aa5.45□□□□□ -1.54
EPHA4-201ENST00000281821 IGIPA6NJ69 53 aa5.45□□□□□ -1.54
EPHA4-201ENST00000281821 CELA1Q9UNI1 258 aa5.45□□□□□ -1.54
EPHA4-201ENST00000281821 ZNF22P17026 224 aaPredicted RBP5.45□□□□□ -1.54
EPHA4-201ENST00000281821 RPL18AQ02543 176 aaKnown RBP5.45□□□□□ -1.54
EPHA4-201ENST00000281821 C6orf223Q8N319 242 aa5.45□□□□□ -1.54
EPHA4-201ENST00000281821 AMELXQ99217 191 aa5.45□□□□□ -1.54
EPHA4-201ENST00000281821 NBDYA0A0U1RRE5 68 aa5.44□□□□□ -1.54
EPHA4-201ENST00000281821 SPANXCQ9NY87 97 aa5.44□□□□□ -1.54
EPHA4-201ENST00000281821 GIG44P09565 113 aaPredicted RBP5.44□□□□□ -1.54
EPHA4-201ENST00000281821 FXYD2P54710 66 aa5.44□□□□□ -1.54
EPHA4-201ENST00000281821 LAMTOR3Q9UHA4 124 aa5.44□□□□□ -1.54
EPHA4-201ENST00000281821 C5orf42Q9H799 3197 aa5.44□□□□□ -1.54
EPHA4-201ENST00000281821 UBE2D1P51668 147 aa5.44□□□□□ -1.54
EPHA4-201ENST00000281821 ANKRD29Q8N6D5 301 aa5.44□□□□□ -1.54
EPHA4-201ENST00000281821 LINC01546A6NGU7 62 aa5.44□□□□□ -1.54
EPHA4-201ENST00000281821 CDKN2A-AS1Q9UH64 79 aa5.44□□□□□ -1.54
EPHA4-201ENST00000281821 HIVEP1P15822 2718 aa5.43□□□□□ -1.54
EPHA4-201ENST00000281821 CFC1BP0CG36 223 aa5.43□□□□□ -1.54
EPHA4-201ENST00000281821 CFC1P0CG37 223 aa5.43□□□□□ -1.54
EPHA4-201ENST00000281821 SND1-IT1Q9HBX3 110 aa5.43□□□□□ -1.54
EPHA4-201ENST00000281821 LOC100131303A0A0U1RQF7 123 aa5.43□□□□□ -1.54
EPHA4-201ENST00000281821 RNASE13Q5GAN3 156 aaKnown RBP5.43□□□□□ -1.54
EPHA4-201ENST00000281821 MUC4Q99102 2169 aa5.42□□□□□ -1.54
EPHA4-201ENST00000281821 TMEM223A0PJW6 202 aa5.42□□□□□ -1.54
EPHA4-201ENST00000281821 FOXI1Q12951 378 aa5.42□□□□□ -1.54
EPHA4-201ENST00000281821 TEN1Q86WV5 123 aa5.42□□□□□ -1.54
EPHA4-201ENST00000281821 ZNF706Q9Y5V0 76 aaPredicted RBP5.42□□□□□ -1.54
EPHA4-201ENST00000281821 NACAE9PAV3 2078 aa5.42□□□□□ -1.54
EPHA4-201ENST00000281821 ESRGQ1W209 222 aa5.42□□□□□ -1.54
EPHA4-201ENST00000281821 SPANXB1Q9NS25 103 aaPredicted RBP5.41□□□□□ -1.54
EPHA4-201ENST00000281821 LINC00242Q5T6M2 205 aa5.41□□□□□ -1.54
EPHA4-201ENST00000281821 TTTY13Q9BZ97 58 aa5.41□□□□□ -1.54
EPHA4-201ENST00000281821 TRIOO75962 3097 aa5.41□□□□□ -1.54
EPHA4-201ENST00000281821 IGLV2-18A0A075B6J9 118 aa5.41□□□□□ -1.54
EPHA4-201ENST00000281821 IGKV2D-26A0A0A0MRZ7 120 aa5.41□□□□□ -1.54
EPHA4-201ENST00000281821 A0A0C4DFX4 3053 aa5.4□□□□□ -1.54
EPHA4-201ENST00000281821 USP17L23D6RBM5 183 aa5.4□□□□□ -1.55
EPHA4-201ENST00000281821 TP73-AS1Q9UF72 201 aa5.4□□□□□ -1.55
EPHA4-201ENST00000281821 WFDC10BQ8IUB3 73 aa5.39□□□□□ -1.55
EPHA4-201ENST00000281821 PLAC8L1A1L4L8 177 aa5.39□□□□□ -1.55
EPHA4-201ENST00000281821 UBE2AP49459 152 aa5.39□□□□□ -1.55
EPHA4-201ENST00000281821 DIRC1Q969H9 104 aa5.39□□□□□ -1.55
EPHA4-201ENST00000281821 OPRPNQ99935 248 aaPredicted RBP5.39□□□□□ -1.55
EPHA4-201ENST00000281821 UBL5Q9BZL1 73 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms