RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 SNURFQ9Y675 71 aa8.67□□□□□ -1.02
SHPRH-201ENST00000275233 NOTCH2Q04721 2471 aa8.66□□□□□ -1.02
SHPRH-201ENST00000275233 CRIP2P52943 208 aaPredicted RBP8.66□□□□□ -1.02
SHPRH-201ENST00000275233 UBE2D2P62837 147 aa8.66□□□□□ -1.02
SHPRH-201ENST00000275233 C9orf116Q5BN46 136 aaPredicted RBP8.66□□□□□ -1.02
SHPRH-201ENST00000275233 HIVEP3Q5T1R4 2406 aa8.66□□□□□ -1.02
SHPRH-201ENST00000275233 FAM30AQ9NZY2 134 aa8.65□□□□□ -1.02
SHPRH-201ENST00000275233 ZNF706Q9Y5V0 76 aaPredicted RBP8.65□□□□□ -1.02
SHPRH-201ENST00000275233 KLLNB2CW77 178 aa8.64□□□□□ -1.03
SHPRH-201ENST00000275233 MRPS12O15235 138 aaKnown RBP8.64□□□□□ -1.03
SHPRH-201ENST00000275233 MRGPRG-AS1Q2M3A8 158 aa8.64□□□□□ -1.03
SHPRH-201ENST00000275233 CIRBP-AS1Q8TBR5 109 aa8.64□□□□□ -1.03
SHPRH-201ENST00000275233 RETNLBQ9BQ08 111 aa8.64□□□□□ -1.03
SHPRH-201ENST00000275233 CYSRT1A8MQ03 144 aa8.64□□□□□ -1.03
SHPRH-201ENST00000275233 POM121L12Q8N7R1 296 aa8.64□□□□□ -1.03
SHPRH-201ENST00000275233 DHRS4-AS1Q9P1J3 65 aa8.63□□□□□ -1.03
SHPRH-201ENST00000275233 TRBV30A0A0K0K1B3 111 aa8.63□□□□□ -1.03
SHPRH-201ENST00000275233 PYGO1Q9Y3Y4 419 aa8.63□□□□□ -1.03
SHPRH-201ENST00000275233 TTC28Q96AY4 2481 aa8.63□□□□□ -1.03
SHPRH-201ENST00000275233 NUPR2A6NF83 97 aa8.62□□□□□ -1.03
SHPRH-201ENST00000275233 M0QXV9 152 aa8.62□□□□□ -1.03
SHPRH-201ENST00000275233 ANKHD1Q8IWZ3 2542 aaKnown RBP8.62□□□□□ -1.03
SHPRH-201ENST00000275233 ATG2AQ2TAZ0 1938 aa8.62□□□□□ -1.03
SHPRH-201ENST00000275233 FAM236DA0A1B0GTK5 79 aa8.61□□□□□ -1.03
SHPRH-201ENST00000275233 FAM236CP0DP71 79 aa8.61□□□□□ -1.03
SHPRH-201ENST00000275233 UNQ6190/PRO20217Q6UXQ8 127 aa8.61□□□□□ -1.03
SHPRH-201ENST00000275233 ACACBO00763 2458 aa8.61□□□□□ -1.03
SHPRH-201ENST00000275233 IGLV5-52A0A0A0MRZ9 124 aa8.61□□□□□ -1.03
SHPRH-201ENST00000275233 ZNF73O43830 326 aaPredicted RBP8.61□□□□□ -1.03
SHPRH-201ENST00000275233 PRR3P79522 188 aaKnown RBP8.61□□□□□ -1.03
SHPRH-201ENST00000275233 Q6ZTC4 211 aa8.61□□□□□ -1.03
SHPRH-201ENST00000275233 CDC42SE2Q9NRR3 84 aa8.61□□□□□ -1.03
SHPRH-201ENST00000275233 ODF3L2Q3SX64 289 aa8.6□□□□□ -1.03
SHPRH-201ENST00000275233 C6orf223Q8N319 242 aa8.6□□□□□ -1.03
SHPRH-201ENST00000275233 MUC22E2RYF6 1773 aaPredicted RBP8.6□□□□□ -1.03
SHPRH-201ENST00000275233 A0A0U1RQV1 116 aa8.6□□□□□ -1.03
SHPRH-201ENST00000275233 COX6A2Q02221 97 aa8.6□□□□□ -1.03
SHPRH-201ENST00000275233 EML5Q05BV3 1969 aa8.59□□□□□ -1.03
SHPRH-201ENST00000275233 K7ERS5 55 aa8.59□□□□□ -1.03
SHPRH-201ENST00000275233 C10orf25Q5T742 122 aa8.59□□□□□ -1.03
SHPRH-201ENST00000275233 COL5A1P20908 1838 aaPredicted RBP8.58□□□□□ -1.04
SHPRH-201ENST00000275233 LRP4O75096 1905 aa8.58□□□□□ -1.04
SHPRH-201ENST00000275233 PTPRSQ13332 1948 aa8.58□□□□□ -1.04
SHPRH-201ENST00000275233 ATRXP46100 2492 aa8.58□□□□□ -1.04
SHPRH-201ENST00000275233 POLR2KP53803 58 aaKnown RBP8.58□□□□□ -1.04
SHPRH-201ENST00000275233 MRPS36P82909 103 aaKnown RBP8.58□□□□□ -1.04
SHPRH-201ENST00000275233 LINC00474Q9P2X8 69 aa8.58□□□□□ -1.04
SHPRH-201ENST00000275233 IGLV4-60A0A075B6I1 120 aa8.57□□□□□ -1.04
SHPRH-201ENST00000275233 CELA1Q9UNI1 258 aa8.57□□□□□ -1.04
SHPRH-201ENST00000275233 UQCRQO14949 82 aa8.56□□□□□ -1.04
SHPRH-201ENST00000275233 COX17Q14061 63 aa8.56□□□□□ -1.04
SHPRH-201ENST00000275233 Q8IZM0 81 aa8.56□□□□□ -1.04
SHPRH-201ENST00000275233 TIMM17BO60830 172 aa8.56□□□□□ -1.04
SHPRH-201ENST00000275233 LINC00694P0DN24 101 aa8.56□□□□□ -1.04
SHPRH-201ENST00000275233 ATP5EP2Q5VTU8 51 aa8.56□□□□□ -1.04
SHPRH-201ENST00000275233 LINC01556Q5JQF7 62 aa8.56□□□□□ -1.04
SHPRH-201ENST00000275233 A0A1W2PPR1 153 aa8.55□□□□□ -1.04
SHPRH-201ENST00000275233 C2orf91Q6ZV80 131 aa8.55□□□□□ -1.04
SHPRH-201ENST00000275233 REG3GQ6UW15 175 aa8.55□□□□□ -1.04
SHPRH-201ENST00000275233 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
SHPRH-201ENST00000275233 TET2Q6N021 2002 aaPredicted RBP8.55□□□□□ -1.04
SHPRH-201ENST00000275233 ESRGQ1W209 222 aa8.54□□□□□ -1.04
SHPRH-201ENST00000275233 CPAMD8Q8IZJ3 1885 aa8.54□□□□□ -1.04
SHPRH-201ENST00000275233 Q6ZVQ6 151 aa8.54□□□□□ -1.04
SHPRH-201ENST00000275233 SERP1Q9Y6X1 66 aa8.54□□□□□ -1.04
SHPRH-201ENST00000275233 X6R8D5 127 aa8.54□□□□□ -1.04
SHPRH-201ENST00000275233 IGLV1-51P01701 117 aa8.54□□□□□ -1.04
SHPRH-201ENST00000275233 C1orf137Q5JT78 98 aa8.54□□□□□ -1.04
SHPRH-201ENST00000275233 LINC00242Q5T6M2 205 aa8.54□□□□□ -1.04
SHPRH-201ENST00000275233 TRBV10-3A0A0K0K1G6 114 aa8.54□□□□□ -1.04
SHPRH-201ENST00000275233 LST1O00453 97 aa8.54□□□□□ -1.04
SHPRH-201ENST00000275233 FAM19A3Q7Z5A8 133 aa8.54□□□□□ -1.04
SHPRH-201ENST00000275233 Q8N9L7 120 aa8.54□□□□□ -1.04
SHPRH-201ENST00000275233 NDUFC2-KCTD14E9PQ53 114 aa8.53□□□□□ -1.04
SHPRH-201ENST00000275233 FHL2Q14192 279 aa8.53□□□□□ -1.04
SHPRH-201ENST00000275233 RPL28P46779 137 aaKnown RBP8.53□□□□□ -1.04
SHPRH-201ENST00000275233 IGHV6-1A0A0B4J1U7 121 aa8.52□□□□□ -1.04
SHPRH-201ENST00000275233 YPEL4Q96NS1 127 aa8.52□□□□□ -1.04
SHPRH-201ENST00000275233 CHCHD7Q9BUK0 85 aa8.52□□□□□ -1.05
SHPRH-201ENST00000275233 DEFB116Q30KQ4 102 aa8.51□□□□□ -1.05
SHPRH-201ENST00000275233 Q6ZSN1 163 aa8.51□□□□□ -1.05
SHPRH-201ENST00000275233 IGIPA6NJ69 53 aa8.51□□□□□ -1.05
SHPRH-201ENST00000275233 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.51□□□□□ -1.05
SHPRH-201ENST00000275233 ZNF580Q9UK33 172 aa8.5□□□□□ -1.05
SHPRH-201ENST00000275233 A6NED7 52 aa8.5□□□□□ -1.05
SHPRH-201ENST00000275233 A0A087WYN8 130 aa8.5□□□□□ -1.05
SHPRH-201ENST00000275233 ADAMTS20P59510 1910 aa8.49□□□□□ -1.05
SHPRH-201ENST00000275233 SMIM1B2RUZ4 78 aa8.49□□□□□ -1.05
SHPRH-201ENST00000275233 C1orf134Q5TEV5 83 aa8.49□□□□□ -1.05
SHPRH-201ENST00000275233 FAM240AA0A1B0GVK7 77 aa8.49□□□□□ -1.05
SHPRH-201ENST00000275233 EGFEM1PQ0D2K5 195 aa8.48□□□□□ -1.05
SHPRH-201ENST00000275233 AGRNO00468 2067 aa8.48□□□□□ -1.05
SHPRH-201ENST00000275233 TSPEAR-AS2P59090 65 aa8.47□□□□□ -1.05
SHPRH-201ENST00000275233 Q8N814 137 aa8.47□□□□□ -1.05
SHPRH-201ENST00000275233 C16orf95Q9H693 158 aa8.47□□□□□ -1.05
SHPRH-201ENST00000275233 PIEZO2Q9H5I5 2752 aa8.47□□□□□ -1.05
SHPRH-201ENST00000275233 NTM-AS1Q6ZSK4 140 aa8.47□□□□□ -1.05
SHPRH-201ENST00000275233 A8MTW9 85 aa8.47□□□□□ -1.05
SHPRH-201ENST00000275233 SERP2Q8N6R1 65 aa8.47□□□□□ -1.05
SHPRH-201ENST00000275233 Q9BRP9 147 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms