RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 SIGMAR1Q99720 223 aa10.09□□□□□ -0.79
TRIM23-202ENST00000274327 TENM3Q9P273 2699 aa10.09□□□□□ -0.79
TRIM23-202ENST00000274327 KRTAP21-3Q3LHN1 58 aa10.08□□□□□ -0.8
TRIM23-202ENST00000274327 DGAT2L7PQ6IED9 249 aa10.08□□□□□ -0.8
TRIM23-202ENST00000274327 A0A096LPF7 62 aa10.07□□□□□ -0.8
TRIM23-202ENST00000274327 UBE2D1P51668 147 aa10.07□□□□□ -0.8
TRIM23-202ENST00000274327 MRPL23Q16540 153 aaKnown RBP10.07□□□□□ -0.8
TRIM23-202ENST00000274327 C11orf45Q8TAV5 145 aa10.07□□□□□ -0.8
TRIM23-202ENST00000274327 CDC42SE2Q9NRR3 84 aa10.07□□□□□ -0.8
TRIM23-202ENST00000274327 ICOSQ9Y6W8 199 aa10.07□□□□□ -0.8
TRIM23-202ENST00000274327 A0A0J9YXV3 536 aa10.07□□□□□ -0.8
TRIM23-202ENST00000274327 H3BNG1 76 aa10.07□□□□□ -0.8
TRIM23-202ENST00000274327 GAGE6Q13070 117 aa10.07□□□□□ -0.8
TRIM23-202ENST00000274327 SH2D6Q7Z4S9 175 aa10.07□□□□□ -0.8
TRIM23-202ENST00000274327 PRO0461Q9UI25 63 aa10.07□□□□□ -0.8
TRIM23-202ENST00000274327 ZNF815PA8K554 130 aa10.06□□□□□ -0.8
TRIM23-202ENST00000274327 NANOS2P60321 138 aaKnown RBP10.06□□□□□ -0.8
TRIM23-202ENST00000274327 CHCHD5Q9BSY4 110 aa10.06□□□□□ -0.8
TRIM23-202ENST00000274327 TMEM101Q96IK0 257 aa10.05□□□□□ -0.8
TRIM23-202ENST00000274327 TRBV20-1A0A075B6N2 111 aa10.05□□□□□ -0.8
TRIM23-202ENST00000274327 GAGE12HA6NDE8 117 aa10.05□□□□□ -0.8
TRIM23-202ENST00000274327 H3BMG7 143 aa10.05□□□□□ -0.8
TRIM23-202ENST00000274327 ZNF22P17026 224 aaPredicted RBP10.05□□□□□ -0.8
TRIM23-202ENST00000274327 SCGB1D4Q6XE38 83 aa10.05□□□□□ -0.8
TRIM23-202ENST00000274327 FAM19A3Q7Z5A8 133 aa10.05□□□□□ -0.8
TRIM23-202ENST00000274327 TINCRA0A1B0GVN0 87 aa10.04□□□□□ -0.8
TRIM23-202ENST00000274327 WFDC2Q14508 124 aa10.04□□□□□ -0.8
TRIM23-202ENST00000274327 TMEM170BQ5T4T1 132 aa10.03□□□□□ -0.8
TRIM23-202ENST00000274327 LCE2DQ5TA82 110 aaPredicted RBP10.03□□□□□ -0.8
TRIM23-202ENST00000274327 IGLV4-60A0A075B6I1 120 aa10.03□□□□□ -0.8
TRIM23-202ENST00000274327 TIRAPP58753 221 aa10.03□□□□□ -0.8
TRIM23-202ENST00000274327 SRSF9Q13242 221 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRIM23-202ENST00000274327 B9D2Q9BPU9 175 aa10.03□□□□□ -0.8
TRIM23-202ENST00000274327 DEFB131BA0A096LNP1 70 aa10.02□□□□□ -0.81
TRIM23-202ENST00000274327 A0A1B0GUV1 79 aa10.02□□□□□ -0.81
TRIM23-202ENST00000274327 TMEM223A0PJW6 202 aa10.02□□□□□ -0.81
TRIM23-202ENST00000274327 M0QXV9 152 aa10.02□□□□□ -0.81
TRIM23-202ENST00000274327 PGPEP1Q9NXJ5 209 aa10.02□□□□□ -0.81
TRIM23-202ENST00000274327 LELP1Q5T871 98 aa10.01□□□□□ -0.81
TRIM23-202ENST00000274327 IGLV5-45A0A087WSX0 123 aa10□□□□□ -0.81
TRIM23-202ENST00000274327 ETDBQ3ZM63 59 aa10□□□□□ -0.81
TRIM23-202ENST00000274327 LINC00242Q5T6M2 205 aa10□□□□□ -0.81
TRIM23-202ENST00000274327 LYPD5Q6UWN5 251 aa10□□□□□ -0.81
TRIM23-202ENST00000274327 TRAV10A0A0B4J240 114 aa9.99□□□□□ -0.81
TRIM23-202ENST00000274327 APOMO95445 188 aa9.99□□□□□ -0.81
TRIM23-202ENST00000274327 TMEM262E9PQX1 116 aa9.98□□□□□ -0.81
TRIM23-202ENST00000274327 TSPAN13O95857 204 aa9.98□□□□□ -0.81
TRIM23-202ENST00000274327 HERVK_113P63121 156 aa9.98□□□□□ -0.81
TRIM23-202ENST00000274327 COX6A2Q02221 97 aa9.98□□□□□ -0.81
TRIM23-202ENST00000274327 GEMIN7Q9H840 131 aaKnown RBP9.98□□□□□ -0.81
TRIM23-202ENST00000274327 TRAV13-1A0A0B4J241 112 aa9.98□□□□□ -0.81
TRIM23-202ENST00000274327 A0A1B0GV72 72 aa9.98□□□□□ -0.81
TRIM23-202ENST00000274327 FOXI1Q12951 378 aa9.98□□□□□ -0.81
TRIM23-202ENST00000274327 MTURNQ8N3F0 131 aa9.98□□□□□ -0.81
TRIM23-202ENST00000274327 LEPROTO15243 131 aa9.97□□□□□ -0.81
TRIM23-202ENST00000274327 TSPEAR-AS2P59090 65 aa9.97□□□□□ -0.81
TRIM23-202ENST00000274327 C10orf126Q8N4M7 172 aa9.97□□□□□ -0.81
TRIM23-202ENST00000274327 IGHV3-30P01768 117 aa9.96□□□□□ -0.81
TRIM23-202ENST00000274327 IGHV3-30-5P0DP03 117 aa9.96□□□□□ -0.81
TRIM23-202ENST00000274327 CDKN2A-AS1Q9UH64 79 aa9.96□□□□□ -0.81
TRIM23-202ENST00000274327 J3QQQ9 107 aa9.96□□□□□ -0.82
TRIM23-202ENST00000274327 LGALS3P17931 250 aaKnown RBP9.96□□□□□ -0.82
TRIM23-202ENST00000274327 TEN1Q86WV5 123 aa9.96□□□□□ -0.82
TRIM23-202ENST00000274327 PPDPFLQ8WWR9 84 aa9.96□□□□□ -0.82
TRIM23-202ENST00000274327 PLEKHB2Q96CS7 222 aa9.96□□□□□ -0.82
TRIM23-202ENST00000274327 IGHV1-58A0A0C4DH39 117 aa9.95□□□□□ -0.82
TRIM23-202ENST00000274327 PRO1854Q9UHT4 67 aa9.95□□□□□ -0.82
TRIM23-202ENST00000274327 A0A0B4J2C4 111 aa9.94□□□□□ -0.82
TRIM23-202ENST00000274327 LINC01600Q96MT4 127 aa9.94□□□□□ -0.82
TRIM23-202ENST00000274327 TRAV8-3A0A0A6YYJ7 113 aa9.93□□□□□ -0.82
TRIM23-202ENST00000274327 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.93□□□□□ -0.82
TRIM23-202ENST00000274327 LINC00959A0A1B0GUT2 108 aa9.93□□□□□ -0.82
TRIM23-202ENST00000274327 SPINK8P0C7L1 97 aa9.93□□□□□ -0.82
TRIM23-202ENST00000274327 IGHV3-30-3P0DP02 117 aa9.93□□□□□ -0.82
TRIM23-202ENST00000274327 Q8N3U1 123 aa9.93□□□□□ -0.82
TRIM23-202ENST00000274327 IGHV3-64A0A075B6Q5 118 aa9.93□□□□□ -0.82
TRIM23-202ENST00000274327 LOC107984156A0A0G2JMH3 177 aa9.93□□□□□ -0.82
TRIM23-202ENST00000274327 NHLRC4P0CG21 123 aaPredicted RBP9.93□□□□□ -0.82
TRIM23-202ENST00000274327 ESRGQ1W209 222 aa9.93□□□□□ -0.82
TRIM23-202ENST00000274327 ARL17AQ8IVW1 177 aa9.93□□□□□ -0.82
TRIM23-202ENST00000274327 C15orf53Q8NAA6 179 aa9.93□□□□□ -0.82
TRIM23-202ENST00000274327 DYNC2H1Q8NCM8 4307 aaKnown RBP9.93□□□□□ -0.82
TRIM23-202ENST00000274327 IGKV3OR2-268A0A0C4DH90 116 aa9.92□□□□□ -0.82
TRIM23-202ENST00000274327 CFC1BP0CG36 223 aa9.92□□□□□ -0.82
TRIM23-202ENST00000274327 CFC1P0CG37 223 aa9.92□□□□□ -0.82
TRIM23-202ENST00000274327 PSMB2P49721 201 aa9.92□□□□□ -0.82
TRIM23-202ENST00000274327 IGLV5-39A0A0G2JS06 123 aa9.91□□□□□ -0.82
TRIM23-202ENST00000274327 SMCPP49901 116 aaPredicted RBP9.91□□□□□ -0.82
TRIM23-202ENST00000274327 LINC00269Q8N2A0 174 aa9.91□□□□□ -0.82
TRIM23-202ENST00000274327 PRKDCP78527 4128 aaKnown RBP9.9□□□□□ -0.82
TRIM23-202ENST00000274327 IGHV3OR16-9A0A0B4J2B5 98 aa9.9□□□□□ -0.82
TRIM23-202ENST00000274327 SMIM1B2RUZ4 78 aa9.9□□□□□ -0.82
TRIM23-202ENST00000274327 ANGP03950 147 aaKnown RBP9.9□□□□□ -0.82
TRIM23-202ENST00000274327 SS18Q15532 418 aa9.89□□□□□ -0.83
TRIM23-202ENST00000274327 WFDC10BQ8IUB3 73 aa9.89□□□□□ -0.83
TRIM23-202ENST00000274327 REG3AQ06141 175 aa9.89□□□□□ -0.83
TRIM23-202ENST00000274327 ZFAND6Q6FIF0 208 aa9.89□□□□□ -0.83
TRIM23-202ENST00000274327 CLPSL2Q6UWE3 100 aa9.89□□□□□ -0.83
TRIM23-202ENST00000274327 TCL1BO95988 128 aa9.88□□□□□ -0.83
TRIM23-202ENST00000274327 PRR34Q9NV39 138 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms