RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 WFDC10AQ9H1F0 79 aa6.24□□□□□ -1.41
TRIM43-201ENST00000272395 GTSF1LQ9H1H1 148 aa6.24□□□□□ -1.41
TRIM43-201ENST00000272395 CSDC2Q9Y534 153 aaKnown RBP6.24□□□□□ -1.41
TRIM43-201ENST00000272395 EIF4EBP3O60516 100 aaPredicted RBP6.23□□□□□ -1.41
TRIM43-201ENST00000272395 ATXN8Q156A1 80 aa6.23□□□□□ -1.41
TRIM43-201ENST00000272395 DGAT2L7PQ6IED9 249 aa6.23□□□□□ -1.41
TRIM43-201ENST00000272395 CEMP1Q6PRD7 247 aaPredicted RBP6.23□□□□□ -1.41
TRIM43-201ENST00000272395 Q6ZUT4 128 aa6.23□□□□□ -1.41
TRIM43-201ENST00000272395 FAM19A3Q7Z5A8 133 aa6.23□□□□□ -1.41
TRIM43-201ENST00000272395 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.23□□□□□ -1.41
TRIM43-201ENST00000272395 TRAV8-3A0A0A6YYJ7 113 aa6.23□□□□□ -1.41
TRIM43-201ENST00000272395 IGKV2-29A2NJV5 120 aaPredicted RBP6.23□□□□□ -1.41
TRIM43-201ENST00000272395 NDUFA1O15239 70 aa6.23□□□□□ -1.41
TRIM43-201ENST00000272395 SLC25A20O43772 301 aa6.23□□□□□ -1.41
TRIM43-201ENST00000272395 CIDEAO60543 219 aa6.23□□□□□ -1.41
TRIM43-201ENST00000272395 PRM2P04554 102 aa6.23□□□□□ -1.41
TRIM43-201ENST00000272395 HERVK_113P63121 156 aa6.23□□□□□ -1.41
TRIM43-201ENST00000272395 RPL36AP83881 106 aaKnown RBP6.23□□□□□ -1.41
TRIM43-201ENST00000272395 DAZ2Q13117 558 aaKnown RBP6.23□□□□□ -1.41
TRIM43-201ENST00000272395 DAZ4Q86SG3 579 aaKnown RBP6.23□□□□□ -1.41
TRIM43-201ENST00000272395 COPS9Q8WXC6 57 aa6.23□□□□□ -1.41
TRIM43-201ENST00000272395 RPL36ALQ969Q0 106 aaKnown RBP6.23□□□□□ -1.41
TRIM43-201ENST00000272395 FAM110AQ9BQ89 295 aa6.23□□□□□ -1.41
TRIM43-201ENST00000272395 DAZ3Q9NR90 486 aaKnown RBP6.23□□□□□ -1.41
TRIM43-201ENST00000272395 XCL2Q9UBD3 114 aa6.23□□□□□ -1.41
TRIM43-201ENST00000272395 Q9UF83 564 aa6.23□□□□□ -1.41
TRIM43-201ENST00000272395 TRAV4A0A0B4J268 109 aa6.22□□□□□ -1.41
TRIM43-201ENST00000272395 TMEM262E9PQX1 116 aa6.22□□□□□ -1.41
TRIM43-201ENST00000272395 PRSS2P07478 247 aa6.22□□□□□ -1.41
TRIM43-201ENST00000272395 CIRBPQ14011 172 aaKnown RBP6.22□□□□□ -1.41
TRIM43-201ENST00000272395 Q1RN00 199 aa6.22□□□□□ -1.41
TRIM43-201ENST00000272395 C1orf158Q8N1D5 194 aa6.22□□□□□ -1.41
TRIM43-201ENST00000272395 MRAPQ8TCY5 172 aa6.22□□□□□ -1.41
TRIM43-201ENST00000272395 CARD19Q96LW7 228 aa6.22□□□□□ -1.41
TRIM43-201ENST00000272395 IGLV5-39A0A0G2JS06 123 aa6.21□□□□□ -1.42
TRIM43-201ENST00000272395 C9JAW5 83 aa6.21□□□□□ -1.42
TRIM43-201ENST00000272395 K7EQD1 137 aa6.21□□□□□ -1.42
TRIM43-201ENST00000272395 COX6CP09669 75 aa6.21□□□□□ -1.42
TRIM43-201ENST00000272395 SPINK8P0C7L1 97 aa6.21□□□□□ -1.42
TRIM43-201ENST00000272395 RNASE13Q5GAN3 156 aaKnown RBP6.21□□□□□ -1.42
TRIM43-201ENST00000272395 DEFB121Q5J5C9 76 aa6.21□□□□□ -1.42
TRIM43-201ENST00000272395 C19orf73Q9NVV2 129 aa6.21□□□□□ -1.42
TRIM43-201ENST00000272395 TRGV1A0A0A0MS02 117 aa6.2□□□□□ -1.42
TRIM43-201ENST00000272395 LINC01620Q4KN68 170 aa6.2□□□□□ -1.42
TRIM43-201ENST00000272395 ADAMTSL4-AS1Q5T5F5 129 aa6.2□□□□□ -1.42
TRIM43-201ENST00000272395 LCE3BQ5TA77 95 aa6.2□□□□□ -1.42
TRIM43-201ENST00000272395 ANKRD29Q8N6D5 301 aa6.2□□□□□ -1.42
TRIM43-201ENST00000272395 CDIP1Q9H305 208 aa6.2□□□□□ -1.42
TRIM43-201ENST00000272395 PPDPFQ9H3Y8 114 aa6.2□□□□□ -1.42
TRIM43-201ENST00000272395 CDKN2A-AS1Q9UH64 79 aa6.2□□□□□ -1.42
TRIM43-201ENST00000272395 IGHV3OR16-12A0A075B7B8 117 aa6.2□□□□□ -1.42
TRIM43-201ENST00000272395 IGHV3-38A0A0C4DH36 116 aa6.2□□□□□ -1.42
TRIM43-201ENST00000272395 IGHV4-30-4P0DP06 118 aa6.2□□□□□ -1.42
TRIM43-201ENST00000272395 TMEM101Q96IK0 257 aa6.2□□□□□ -1.42
TRIM43-201ENST00000272395 ICOSQ9Y6W8 199 aa6.2□□□□□ -1.42
TRIM43-201ENST00000272395 TRBV10-2A0A0K0K1G8 114 aa6.19□□□□□ -1.42
TRIM43-201ENST00000272395 H7C2G1 150 aa6.19□□□□□ -1.42
TRIM43-201ENST00000272395 H7C423 109 aa6.19□□□□□ -1.42
TRIM43-201ENST00000272395 TRIAP1O43715 76 aa6.19□□□□□ -1.42
TRIM43-201ENST00000272395 RPL13AP40429 203 aaKnown RBP6.19□□□□□ -1.42
TRIM43-201ENST00000272395 LINC00242Q5T6M2 205 aa6.19□□□□□ -1.42
TRIM43-201ENST00000272395 C16orf74Q96GX8 76 aa6.19□□□□□ -1.42
TRIM43-201ENST00000272395 A0A1B0GV72 72 aa6.18□□□□□ -1.42
TRIM43-201ENST00000272395 Q6ZTI0 123 aa6.18□□□□□ -1.42
TRIM43-201ENST00000272395 PRKDCP78527 4128 aaKnown RBP6.17□□□□□ -1.42
TRIM43-201ENST00000272395 H3BT86 120 aa6.17□□□□□ -1.42
TRIM43-201ENST00000272395 HERV-K104P63124 156 aa6.17□□□□□ -1.42
TRIM43-201ENST00000272395 KRTAP9-9Q9BYP9 154 aa6.17□□□□□ -1.42
TRIM43-201ENST00000272395 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
TRIM43-201ENST00000272395 TRBV6-4A0A1B0GX49 114 aa6.17□□□□□ -1.42
TRIM43-201ENST00000272395 RPL35AP18077 110 aaKnown RBP6.17□□□□□ -1.42
TRIM43-201ENST00000272395 NTM-AS1Q6ZSK4 140 aa6.17□□□□□ -1.42
TRIM43-201ENST00000272395 OVOL2Q9BRP0 275 aa6.17□□□□□ -1.42
TRIM43-201ENST00000272395 TMEM243Q9BU79 118 aa6.17□□□□□ -1.42
TRIM43-201ENST00000272395 CDC42SE2Q9NRR3 84 aa6.17□□□□□ -1.42
TRIM43-201ENST00000272395 A8MZ25 164 aa6.16□□□□□ -1.42
TRIM43-201ENST00000272395 SMIM1B2RUZ4 78 aa6.16□□□□□ -1.42
TRIM43-201ENST00000272395 COX6A2Q02221 97 aa6.16□□□□□ -1.42
TRIM43-201ENST00000272395 LINC00308Q8TCZ7 52 aa6.16□□□□□ -1.42
TRIM43-201ENST00000272395 Q9H8V8 135 aa6.16□□□□□ -1.42
TRIM43-201ENST00000272395 F5H768 121 aa6.15□□□□□ -1.42
TRIM43-201ENST00000272395 LST1O00453 97 aa6.15□□□□□ -1.42
TRIM43-201ENST00000272395 LCE2BO14633 110 aa6.15□□□□□ -1.42
TRIM43-201ENST00000272395 UBE2L6O14933 153 aa6.15□□□□□ -1.42
TRIM43-201ENST00000272395 GIG44P09565 113 aaPredicted RBP6.15□□□□□ -1.42
TRIM43-201ENST00000272395 LINC00694P0DN24 101 aa6.15□□□□□ -1.42
TRIM43-201ENST00000272395 XGP55808 180 aa6.15□□□□□ -1.42
TRIM43-201ENST00000272395 NTN5Q8WTR8 489 aaPredicted RBP6.15□□□□□ -1.42
TRIM43-201ENST00000272395 ZNF625Q96I27 306 aaPredicted RBP6.15□□□□□ -1.42
TRIM43-201ENST00000272395 NOP10Q9NPE3 64 aaKnown RBP6.15□□□□□ -1.42
TRIM43-201ENST00000272395 PLAC8L1A1L4L8 177 aa6.14□□□□□ -1.43
TRIM43-201ENST00000272395 C2orf82Q6UX34 121 aa6.14□□□□□ -1.43
TRIM43-201ENST00000272395 UBE2WQ96B02 151 aa6.14□□□□□ -1.43
TRIM43-201ENST00000272395 TRGV2A0A075B6R0 118 aa6.14□□□□□ -1.43
TRIM43-201ENST00000272395 TRAV13-1A0A0B4J241 112 aa6.14□□□□□ -1.43
TRIM43-201ENST00000272395 GAGE12JA6NER3 117 aa6.14□□□□□ -1.43
TRIM43-201ENST00000272395 GAGE4Q13068 117 aa6.14□□□□□ -1.43
TRIM43-201ENST00000272395 GAGE5Q13069 117 aa6.14□□□□□ -1.43
TRIM43-201ENST00000272395 B9D2Q9BPU9 175 aa6.14□□□□□ -1.43
TRIM43-201ENST00000272395 RETNQ9HD89 108 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms