RNA–Protein interactions for RNA: ENST00000272133.3

CNIH3-201, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNIH3, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-201ENST00000272133 ODF3L2Q3SX64 289 aa13.27□□□□□ -0.28
CNIH3-201ENST00000272133 SDIM1Q6ZPB5 146 aa13.27□□□□□ -0.28
CNIH3-201ENST00000272133 IL17DQ8TAD2 202 aa13.27□□□□□ -0.28
CNIH3-201ENST00000272133 NBPF19A0A087WUL8 3843 aa13.27□□□□□ -0.28
CNIH3-201ENST00000272133 J3QLI3 93 aa13.27□□□□□ -0.29
CNIH3-201ENST00000272133 KRTAP10-9P60411 292 aa13.27□□□□□ -0.29
CNIH3-201ENST00000272133 GAGE2AQ6NT46 116 aa13.27□□□□□ -0.29
CNIH3-201ENST00000272133 LINC00337Q8N6G1 96 aa13.27□□□□□ -0.29
CNIH3-201ENST00000272133 C4orf3Q8WVX3 66 aa13.26□□□□□ -0.29
CNIH3-201ENST00000272133 TEX15Q9BXT5 2789 aa13.25□□□□□ -0.29
CNIH3-201ENST00000272133 TRBV10-1A0A0K0K1A3 114 aa13.25□□□□□ -0.29
CNIH3-201ENST00000272133 FAM222AQ5U5X8 452 aa13.25□□□□□ -0.29
CNIH3-201ENST00000272133 STHQ8IWL8 128 aa13.25□□□□□ -0.29
CNIH3-201ENST00000272133 MIR7-3HGQ8N6C7 128 aa13.25□□□□□ -0.29
CNIH3-201ENST00000272133 CRPP02741 224 aa13.25□□□□□ -0.29
CNIH3-201ENST00000272133 PTPN13Q12923 2485 aa13.24□□□□□ -0.29
CNIH3-201ENST00000272133 IGKV2-28A0A075B6P5 120 aa13.24□□□□□ -0.29
CNIH3-201ENST00000272133 IGKV2D-28P01615 120 aa13.24□□□□□ -0.29
CNIH3-201ENST00000272133 MALP21145 153 aa13.24□□□□□ -0.29
CNIH3-201ENST00000272133 RPL28P46779 137 aaKnown RBP13.24□□□□□ -0.29
CNIH3-201ENST00000272133 TRAV13-2A0A0B4J235 113 aa13.24□□□□□ -0.29
CNIH3-201ENST00000272133 UBE2L6O14933 153 aa13.24□□□□□ -0.29
CNIH3-201ENST00000272133 FSHBP01225 129 aa13.24□□□□□ -0.29
CNIH3-201ENST00000272133 TOMM7Q9P0U1 55 aa13.24□□□□□ -0.29
CNIH3-201ENST00000272133 INAFM2P0DMQ5 153 aa13.23□□□□□ -0.29
CNIH3-201ENST00000272133 TMEM126AQ9H061 195 aa13.23□□□□□ -0.29
CNIH3-201ENST00000272133 ABCA12Q86UK0 2595 aa13.22□□□□□ -0.29
CNIH3-201ENST00000272133 A0A087WYN8 130 aa13.22□□□□□ -0.29
CNIH3-201ENST00000272133 IGKV3OR2-268A0A0C4DH90 116 aa13.22□□□□□ -0.29
CNIH3-201ENST00000272133 C9orf129Q5T035 196 aaKnown RBP13.22□□□□□ -0.29
CNIH3-201ENST00000272133 SND1-IT1Q9HBX3 110 aa13.22□□□□□ -0.29
CNIH3-201ENST00000272133 ZNF469Q96JG9 3925 aaPredicted RBP13.22□□□□□ -0.29
CNIH3-201ENST00000272133 JMJD1CQ15652 2540 aa13.22□□□□□ -0.29
CNIH3-201ENST00000272133 C9orf153Q5TBE3 101 aa13.22□□□□□ -0.29
CNIH3-201ENST00000272133 TMEM243Q9BU79 118 aa13.22□□□□□ -0.29
CNIH3-201ENST00000272133 NIPBLQ6KC79 2804 aaeCLIP13.21□□□□□ -0.29
CNIH3-201ENST00000272133 C3orf22Q8N5N4 141 aa13.21□□□□□ -0.29
CNIH3-201ENST00000272133 COX7B2Q8TF08 81 aa13.21□□□□□ -0.29
CNIH3-201ENST00000272133 NOP10Q9NPE3 64 aaKnown RBP13.21□□□□□ -0.29
CNIH3-201ENST00000272133 LOC100131303A0A0U1RQF7 123 aa13.21□□□□□ -0.3
CNIH3-201ENST00000272133 PF4P02776 101 aa13.21□□□□□ -0.3
CNIH3-201ENST00000272133 C5orf38Q86SI9 138 aa13.21□□□□□ -0.3
CNIH3-201ENST00000272133 PPDPFQ9H3Y8 114 aa13.2□□□□□ -0.3
CNIH3-201ENST00000272133 TLN2Q9Y4G6 2542 aa13.2□□□□□ -0.3
CNIH3-201ENST00000272133 SMIM11BQ8TCY0 68 aa13.2□□□□□ -0.3
CNIH3-201ENST00000272133 CR1P17927 2039 aa13.19□□□□□ -0.3
CNIH3-201ENST00000272133 DNAL4O96015 105 aa13.18□□□□□ -0.3
CNIH3-201ENST00000272133 UQCRQO14949 82 aa13.18□□□□□ -0.3
CNIH3-201ENST00000272133 IGHV4-31P0DP07 118 aa13.18□□□□□ -0.3
CNIH3-201ENST00000272133 CXCL5P42830 114 aa13.18□□□□□ -0.3
CNIH3-201ENST00000272133 LINC00158P58513 81 aa13.18□□□□□ -0.3
CNIH3-201ENST00000272133 C14orf132Q9NPU4 83 aa13.18□□□□□ -0.3
CNIH3-201ENST00000272133 APCP25054 2843 aa13.17□□□□□ -0.3
CNIH3-201ENST00000272133 C11orf44Q8N8P7 122 aa13.17□□□□□ -0.3
CNIH3-201ENST00000272133 ATP5G1P05496 136 aa13.16□□□□□ -0.3
CNIH3-201ENST00000272133 TENM4Q6N022 2769 aa13.16□□□□□ -0.3
CNIH3-201ENST00000272133 NF1P21359 2839 aa13.16□□□□□ -0.3
CNIH3-201ENST00000272133 SETXQ7Z333 2677 aaKnown RBP13.16□□□□□ -0.3
CNIH3-201ENST00000272133 CCL18P55774 89 aa13.16□□□□□ -0.3
CNIH3-201ENST00000272133 IGLV4-60A0A075B6I1 120 aa13.15□□□□□ -0.3
CNIH3-201ENST00000272133 A0A1W2PRX2 142 aa13.15□□□□□ -0.3
CNIH3-201ENST00000272133 LINC00526Q96FQ7 95 aa13.15□□□□□ -0.3
CNIH3-201ENST00000272133 TRGV2A0A075B6R0 118 aa13.14□□□□□ -0.31
CNIH3-201ENST00000272133 PFN2P35080 140 aa13.13□□□□□ -0.31
CNIH3-201ENST00000272133 KLK5Q9Y337 293 aaPredicted RBP13.13□□□□□ -0.31
CNIH3-201ENST00000272133 SETD2Q9BYW2 2564 aaPredicted RBP13.13□□□□□ -0.31
CNIH3-201ENST00000272133 OVOL2Q9BRP0 275 aa13.13□□□□□ -0.31
CNIH3-201ENST00000272133 NAV2Q8IVL1 2488 aa13.13□□□□□ -0.31
CNIH3-201ENST00000272133 SONP18583 2426 aaKnown RBP13.12□□□□□ -0.31
CNIH3-201ENST00000272133 PLAC8L1A1L4L8 177 aa13.12□□□□□ -0.31
CNIH3-201ENST00000272133 LECT2O14960 151 aa13.12□□□□□ -0.31
CNIH3-201ENST00000272133 IGHV3OR16-9A0A0B4J2B5 98 aa13.11□□□□□ -0.31
CNIH3-201ENST00000272133 PLA2G2AP14555 144 aa13.11□□□□□ -0.31
CNIH3-201ENST00000272133 LRRC75A-AS1Q8N1F1 130 aa13.11□□□□□ -0.31
CNIH3-201ENST00000272133 GIG44P09565 113 aaPredicted RBP13.11□□□□□ -0.31
CNIH3-201ENST00000272133 COX7CP15954 63 aa13.11□□□□□ -0.31
CNIH3-201ENST00000272133 HIST1H4AP62805 103 aaKnown RBP13.11□□□□□ -0.31
CNIH3-201ENST00000272133 C2orf48Q96LS8 159 aa13.11□□□□□ -0.31
CNIH3-201ENST00000272133 DEFB113Q30KQ7 82 aa13.1□□□□□ -0.31
CNIH3-201ENST00000272133 WFDC10AQ9H1F0 79 aa13.1□□□□□ -0.31
CNIH3-201ENST00000272133 LINC00846Q9NV44 126 aa13.1□□□□□ -0.31
CNIH3-201ENST00000272133 TRAV25A0A0B4J276 109 aa13.1□□□□□ -0.31
CNIH3-201ENST00000272133 IGKV3D-7A0A0C4DH55 119 aa13.1□□□□□ -0.31
CNIH3-201ENST00000272133 SLPIP03973 132 aa13.1□□□□□ -0.31
CNIH3-201ENST00000272133 NCR3O14931 201 aa13.09□□□□□ -0.31
CNIH3-201ENST00000272133 PAX4O43316 350 aa13.09□□□□□ -0.31
CNIH3-201ENST00000272133 C11orf68Q9H3H3 251 aaKnown RBP13.09□□□□□ -0.31
CNIH3-201ENST00000272133 H0YGX0 51 aa13.09□□□□□ -0.31
CNIH3-201ENST00000272133 OR13C6PQ8NH95 151 aa13.09□□□□□ -0.31
CNIH3-201ENST00000272133 TRGV4A0A0C4DH28 118 aa13.08□□□□□ -0.32
CNIH3-201ENST00000272133 TRBV6-4A0A1B0GX49 114 aa13.08□□□□□ -0.32
CNIH3-201ENST00000272133 IBA57-AS1B1ANH7 110 aa13.08□□□□□ -0.32
CNIH3-201ENST00000272133 KRTAP1-3Q8IUG1 177 aa13.08□□□□□ -0.32
CNIH3-201ENST00000272133 OBSCN-AS1Q96MR7 158 aa13.08□□□□□ -0.32
CNIH3-201ENST00000272133 TRBV6-8A0A0A6YYG3 113 aa13.07□□□□□ -0.32
CNIH3-201ENST00000272133 A0A087WZ39 114 aa13.06□□□□□ -0.32
CNIH3-201ENST00000272133 ATOX1O00244 68 aa13.06□□□□□ -0.32
CNIH3-201ENST00000272133 C16orf74Q96GX8 76 aa13.06□□□□□ -0.32
CNIH3-201ENST00000272133 RPL35AP18077 110 aaKnown RBP13.06□□□□□ -0.32
CNIH3-201ENST00000272133 A0A087WVE0 104 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms