RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 CFC1P0CG37 223 aa14.41□□□□□ -0.1
LYSMD2-201ENST00000267838 PRO1854Q9UHT4 67 aa14.41□□□□□ -0.1
LYSMD2-201ENST00000267838 DNAH3Q8TD57 4116 aa14.4□□□□□ -0.1
LYSMD2-201ENST00000267838 Q6ZUT4 128 aa14.4□□□□□ -0.1
LYSMD2-201ENST00000267838 TMEM243Q9BU79 118 aa14.4□□□□□ -0.1
LYSMD2-201ENST00000267838 PAX4O43316 350 aa14.39□□□□□ -0.11
LYSMD2-201ENST00000267838 MRPS36P82909 103 aaKnown RBP14.39□□□□□ -0.11
LYSMD2-201ENST00000267838 RNASE13Q5GAN3 156 aaKnown RBP14.39□□□□□ -0.11
LYSMD2-201ENST00000267838 DGAT2L7PQ6IED9 249 aa14.39□□□□□ -0.11
LYSMD2-201ENST00000267838 A0A0B4J2C4 111 aa14.38□□□□□ -0.11
LYSMD2-201ENST00000267838 A0A0J9YXV3 536 aa14.38□□□□□ -0.11
LYSMD2-201ENST00000267838 MTURNQ8N3F0 131 aa14.38□□□□□ -0.11
LYSMD2-201ENST00000267838 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.37□□□□□ -0.11
LYSMD2-201ENST00000267838 UBE2L6O14933 153 aa14.37□□□□□ -0.11
LYSMD2-201ENST00000267838 PRB2P02812 416 aaPredicted RBP14.37□□□□□ -0.11
LYSMD2-201ENST00000267838 SMAGPQ0VAQ4 97 aa14.37□□□□□ -0.11
LYSMD2-201ENST00000267838 CSDC2Q9Y534 153 aaKnown RBP14.37□□□□□ -0.11
LYSMD2-201ENST00000267838 TRBV6-8A0A0A6YYG3 113 aa14.37□□□□□ -0.11
LYSMD2-201ENST00000267838 VSIG2Q96IQ7 327 aa14.37□□□□□ -0.11
LYSMD2-201ENST00000267838 H7C423 109 aa14.36□□□□□ -0.11
LYSMD2-201ENST00000267838 FOXI1Q12951 378 aa14.36□□□□□ -0.11
LYSMD2-201ENST00000267838 F5H768 121 aa14.35□□□□□ -0.11
LYSMD2-201ENST00000267838 SMCPP49901 116 aaPredicted RBP14.35□□□□□ -0.11
LYSMD2-201ENST00000267838 C11orf68Q9H3H3 251 aaKnown RBP14.35□□□□□ -0.11
LYSMD2-201ENST00000267838 KPRPQ5T749 579 aaPredicted RBP14.34□□□□□ -0.11
LYSMD2-201ENST00000267838 A4D1N5 150 aa14.34□□□□□ -0.11
LYSMD2-201ENST00000267838 K7EIL1 84 aa14.34□□□□□ -0.11
LYSMD2-201ENST00000267838 TCL1BO95988 128 aa14.34□□□□□ -0.11
LYSMD2-201ENST00000267838 HTN3P15516 51 aa14.34□□□□□ -0.11
LYSMD2-201ENST00000267838 TRAV26-1A0A087WT03 109 aa14.33□□□□□ -0.12
LYSMD2-201ENST00000267838 SCGB1C2P0DMR2 95 aa14.33□□□□□ -0.12
LYSMD2-201ENST00000267838 A0A0J9YXY3 114 aa14.32□□□□□ -0.12
LYSMD2-201ENST00000267838 TINCRA0A1B0GVN0 87 aa14.32□□□□□ -0.12
LYSMD2-201ENST00000267838 IGHV3-30-3P0DP02 117 aa14.32□□□□□ -0.12
LYSMD2-201ENST00000267838 SFTA2Q6UW10 78 aa14.32□□□□□ -0.12
LYSMD2-201ENST00000267838 PPDPFLQ8WWR9 84 aa14.32□□□□□ -0.12
LYSMD2-201ENST00000267838 ERG28Q9UKR5 140 aa14.32□□□□□ -0.12
LYSMD2-201ENST00000267838 TEN1Q86WV5 123 aa14.32□□□□□ -0.12
LYSMD2-201ENST00000267838 TMEM101Q96IK0 257 aa14.32□□□□□ -0.12
LYSMD2-201ENST00000267838 CDC42SE2Q9NRR3 84 aa14.32□□□□□ -0.12
LYSMD2-201ENST00000267838 IGHV3-64A0A075B6Q5 118 aa14.31□□□□□ -0.12
LYSMD2-201ENST00000267838 A0A096LPF7 62 aa14.31□□□□□ -0.12
LYSMD2-201ENST00000267838 IGHV1-58A0A0C4DH39 117 aa14.31□□□□□ -0.12
LYSMD2-201ENST00000267838 M0QXV9 152 aa14.31□□□□□ -0.12
LYSMD2-201ENST00000267838 IGHV3-33P01772 117 aa14.31□□□□□ -0.12
LYSMD2-201ENST00000267838 GAGE6Q13070 117 aa14.31□□□□□ -0.12
LYSMD2-201ENST00000267838 MUSTN1Q8IVN3 82 aa14.31□□□□□ -0.12
LYSMD2-201ENST00000267838 CHCHD5Q9BSY4 110 aa14.31□□□□□ -0.12
LYSMD2-201ENST00000267838 DEFB121Q5J5C9 76 aa14.29□□□□□ -0.12
LYSMD2-201ENST00000267838 SPANXDQ9BXN6 97 aa14.29□□□□□ -0.12
LYSMD2-201ENST00000267838 SPANXCQ9NY87 97 aa14.29□□□□□ -0.12
LYSMD2-201ENST00000267838 A0A0J9YWU9 116 aa14.28□□□□□ -0.12
LYSMD2-201ENST00000267838 NOTCH1P46531 2555 aa14.27□□□□□ -0.13
LYSMD2-201ENST00000267838 MRPL23Q16540 153 aaKnown RBP14.27□□□□□ -0.13
LYSMD2-201ENST00000267838 GEMIN7Q9H840 131 aaKnown RBP14.26□□□□□ -0.13
LYSMD2-201ENST00000267838 NDUFA12Q9UI09 145 aa14.26□□□□□ -0.13
LYSMD2-201ENST00000267838 ICOSQ9Y6W8 199 aa14.26□□□□□ -0.13
LYSMD2-201ENST00000267838 TIRAPP58753 221 aa14.25□□□□□ -0.13
LYSMD2-201ENST00000267838 FAM19A3Q7Z5A8 133 aa14.25□□□□□ -0.13
LYSMD2-201ENST00000267838 TM2D3Q9BRN9 247 aa14.25□□□□□ -0.13
LYSMD2-201ENST00000267838 MGAM2Q2M2H8 2515 aa14.25□□□□□ -0.13
LYSMD2-201ENST00000267838 Q1RN00 199 aa14.24□□□□□ -0.13
LYSMD2-201ENST00000267838 Q6ZTC4 211 aa14.24□□□□□ -0.13
LYSMD2-201ENST00000267838 LITAFQ99732 161 aa14.24□□□□□ -0.13
LYSMD2-201ENST00000267838 IGLV4-60A0A075B6I1 120 aa14.24□□□□□ -0.13
LYSMD2-201ENST00000267838 EIF4EBP3O60516 100 aaPredicted RBP14.24□□□□□ -0.13
LYSMD2-201ENST00000267838 TIMM17BO60830 172 aa14.24□□□□□ -0.13
LYSMD2-201ENST00000267838 ATXN8Q156A1 80 aa14.24□□□□□ -0.13
LYSMD2-201ENST00000267838 LINC00242Q5T6M2 205 aa14.24□□□□□ -0.13
LYSMD2-201ENST00000267838 MRAPQ8TCY5 172 aa14.24□□□□□ -0.13
LYSMD2-201ENST00000267838 TRAV13-1A0A0B4J241 112 aa14.23□□□□□ -0.13
LYSMD2-201ENST00000267838 MIAQ16674 131 aa14.23□□□□□ -0.13
LYSMD2-201ENST00000267838 NBEAL1Q6ZS30 2694 aa14.23□□□□□ -0.13
LYSMD2-201ENST00000267838 IGLV5-45A0A087WSX0 123 aa14.22□□□□□ -0.13
LYSMD2-201ENST00000267838 TRAV8-3A0A0A6YYJ7 113 aa14.22□□□□□ -0.13
LYSMD2-201ENST00000267838 TRBV30A0A0K0K1B3 111 aa14.22□□□□□ -0.13
LYSMD2-201ENST00000267838 SLC25A20O43772 301 aa14.22□□□□□ -0.13
LYSMD2-201ENST00000267838 HERVK_113P63121 156 aa14.22□□□□□ -0.13
LYSMD2-201ENST00000267838 ZFAND6Q6FIF0 208 aa14.22□□□□□ -0.13
LYSMD2-201ENST00000267838 COX6A2Q02221 97 aa14.22□□□□□ -0.13
LYSMD2-201ENST00000267838 KRTAP21-3Q3LHN1 58 aa14.22□□□□□ -0.13
LYSMD2-201ENST00000267838 C11orf45Q8TAV5 145 aa14.22□□□□□ -0.13
LYSMD2-201ENST00000267838 TMEM262E9PQX1 116 aa14.21□□□□□ -0.13
LYSMD2-201ENST00000267838 ANKRD29Q8N6D5 301 aa14.21□□□□□ -0.13
LYSMD2-201ENST00000267838 CARD19Q96LW7 228 aa14.21□□□□□ -0.13
LYSMD2-201ENST00000267838 CDKN2A-AS1Q9UH64 79 aa14.21□□□□□ -0.13
LYSMD2-201ENST00000267838 IFITM1P13164 125 aa14.2□□□□□ -0.14
LYSMD2-201ENST00000267838 NANOS2P60321 138 aaKnown RBP14.2□□□□□ -0.14
LYSMD2-201ENST00000267838 DNHD1Q96M86 4753 aa14.2□□□□□ -0.14
LYSMD2-201ENST00000267838 A0A1B0GUV1 79 aa14.19□□□□□ -0.14
LYSMD2-201ENST00000267838 C9JAW5 83 aa14.19□□□□□ -0.14
LYSMD2-201ENST00000267838 H3BNG1 76 aa14.19□□□□□ -0.14
LYSMD2-201ENST00000267838 SPINK8P0C7L1 97 aa14.19□□□□□ -0.14
LYSMD2-201ENST00000267838 LINC01600Q96MT4 127 aa14.19□□□□□ -0.14
LYSMD2-201ENST00000267838 CDIP1Q9H305 208 aa14.19□□□□□ -0.14
LYSMD2-201ENST00000267838 H7C2G1 150 aa14.19□□□□□ -0.14
LYSMD2-201ENST00000267838 PRSS2P07478 247 aa14.18□□□□□ -0.14
LYSMD2-201ENST00000267838 A0A1B0GV72 72 aa14.17□□□□□ -0.14
LYSMD2-201ENST00000267838 NDUFA1O15239 70 aa14.17□□□□□ -0.14
LYSMD2-201ENST00000267838 LINC01620Q4KN68 170 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms