RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 Q6Q795 121 aa8.46□□□□□ -1.05
VPS33A-201ENST00000267199 CAMK2N2Q96S95 79 aa8.46□□□□□ -1.05
VPS33A-201ENST00000267199 MRPS36P82909 103 aaKnown RBP8.46□□□□□ -1.06
VPS33A-201ENST00000267199 C18orf65Q6ZTR6 163 aa8.45□□□□□ -1.06
VPS33A-201ENST00000267199 SERP2Q8N6R1 65 aa8.45□□□□□ -1.06
VPS33A-201ENST00000267199 PRO0461Q9UI25 63 aa8.45□□□□□ -1.06
VPS33A-201ENST00000267199 FAM236DA0A1B0GTK5 79 aa8.45□□□□□ -1.06
VPS33A-201ENST00000267199 FAM236CP0DP71 79 aa8.45□□□□□ -1.06
VPS33A-201ENST00000267199 IGKV2D-24A0A075B6R9 120 aa8.44□□□□□ -1.06
VPS33A-201ENST00000267199 PKIGQ9Y2B9 76 aa8.44□□□□□ -1.06
VPS33A-201ENST00000267199 MPLKIPQ8TAP9 179 aa8.44□□□□□ -1.06
VPS33A-201ENST00000267199 KLK12Q9UKR0 248 aa8.44□□□□□ -1.06
VPS33A-201ENST00000267199 TIMM17BO60830 172 aa8.44□□□□□ -1.06
VPS33A-201ENST00000267199 ZNF702PQ9H963 129 aa8.44□□□□□ -1.06
VPS33A-201ENST00000267199 SMIM11BQ8TCY0 68 aa8.43□□□□□ -1.06
VPS33A-201ENST00000267199 C6orf99Q4VX62 202 aa8.43□□□□□ -1.06
VPS33A-201ENST00000267199 MGAQ8IWI9 3026 aa8.43□□□□□ -1.06
VPS33A-201ENST00000267199 A0A0U1RQV1 116 aa8.43□□□□□ -1.06
VPS33A-201ENST00000267199 SNURFQ9Y675 71 aa8.43□□□□□ -1.06
VPS33A-201ENST00000267199 FUSP35637 526 aaKnown RBP eCLIP8.42□□□□□ -1.06
VPS33A-201ENST00000267199 LINC00269Q8N2A0 174 aa8.42□□□□□ -1.06
VPS33A-201ENST00000267199 FAM240AA0A1B0GVK7 77 aa8.42□□□□□ -1.06
VPS33A-201ENST00000267199 DEFB135Q30KP9 77 aa8.42□□□□□ -1.06
VPS33A-201ENST00000267199 SHISA2Q6UWI4 295 aa8.42□□□□□ -1.06
VPS33A-201ENST00000267199 DIRC1Q969H9 104 aa8.42□□□□□ -1.06
VPS33A-201ENST00000267199 LOC107984640A0A0U1RRK4 108 aa8.42□□□□□ -1.06
VPS33A-201ENST00000267199 CXCL5P42830 114 aa8.42□□□□□ -1.06
VPS33A-201ENST00000267199 CENPEQ02224 2701 aa8.42□□□□□ -1.06
VPS33A-201ENST00000267199 LOC100131303A0A0U1RQF7 123 aa8.41□□□□□ -1.06
VPS33A-201ENST00000267199 IBA57-AS1B1ANH7 110 aa8.41□□□□□ -1.06
VPS33A-201ENST00000267199 DEFB121Q5J5C9 76 aa8.41□□□□□ -1.06
VPS33A-201ENST00000267199 LINC00242Q5T6M2 205 aa8.41□□□□□ -1.06
VPS33A-201ENST00000267199 PSCAO43653 123 aa8.41□□□□□ -1.06
VPS33A-201ENST00000267199 HRCT1Q6UXD1 115 aa8.41□□□□□ -1.06
VPS33A-201ENST00000267199 LAMA1P25391 3075 aa8.4□□□□□ -1.06
VPS33A-201ENST00000267199 UBE2BP63146 152 aa8.4□□□□□ -1.07
VPS33A-201ENST00000267199 LINC00526Q96FQ7 95 aa8.4□□□□□ -1.07
VPS33A-201ENST00000267199 FAM110AQ9BQ89 295 aa8.4□□□□□ -1.07
VPS33A-201ENST00000267199 XAGE1AQ9HD64 81 aa8.4□□□□□ -1.07
VPS33A-201ENST00000267199 HIGD2BQ4VC39 106 aa8.39□□□□□ -1.07
VPS33A-201ENST00000267199 COX6A2Q02221 97 aa8.39□□□□□ -1.07
VPS33A-201ENST00000267199 C9orf66Q5T8R8 295 aa8.39□□□□□ -1.07
VPS33A-201ENST00000267199 PPDPFQ9H3Y8 114 aa8.39□□□□□ -1.07
VPS33A-201ENST00000267199 PRO0255Q9UI72 69 aa8.39□□□□□ -1.07
VPS33A-201ENST00000267199 ETDCA0A1B0GVM5 59 aa8.38□□□□□ -1.07
VPS33A-201ENST00000267199 CCL18P55774 89 aa8.38□□□□□ -1.07
VPS33A-201ENST00000267199 SPART-AS1P0CW21 52 aa8.38□□□□□ -1.07
VPS33A-201ENST00000267199 CDK2AP2O75956 126 aa8.37□□□□□ -1.07
VPS33A-201ENST00000267199 WFDC10AQ9H1F0 79 aa8.37□□□□□ -1.07
VPS33A-201ENST00000267199 NDUFC2O95298 119 aa8.37□□□□□ -1.07
VPS33A-201ENST00000267199 TRBV6-8A0A0A6YYG3 113 aa8.37□□□□□ -1.07
VPS33A-201ENST00000267199 SMIM1B2RUZ4 78 aa8.37□□□□□ -1.07
VPS33A-201ENST00000267199 FAM222AQ5U5X8 452 aa8.37□□□□□ -1.07
VPS33A-201ENST00000267199 FAM19A5Q7Z5A7 132 aaPredicted RBP8.37□□□□□ -1.07
VPS33A-201ENST00000267199 CHCHD10Q8WYQ3 142 aaPredicted RBP8.37□□□□□ -1.07
VPS33A-201ENST00000267199 COX7BP24311 80 aa8.36□□□□□ -1.07
VPS33A-201ENST00000267199 SMIM9A6NGZ8 99 aa8.36□□□□□ -1.07
VPS33A-201ENST00000267199 Q6ZQY7 126 aa8.36□□□□□ -1.07
VPS33A-201ENST00000267199 DNAH14Q0VDD8 3507 aa8.36□□□□□ -1.07
VPS33A-201ENST00000267199 REG3AQ06141 175 aa8.36□□□□□ -1.07
VPS33A-201ENST00000267199 LRRC75A-AS1Q8N1F1 130 aa8.36□□□□□ -1.07
VPS33A-201ENST00000267199 BPY2O14599 106 aa8.36□□□□□ -1.07
VPS33A-201ENST00000267199 SZT2Q5T011 3432 aa8.35□□□□□ -1.07
VPS33A-201ENST00000267199 A0A087WYN8 130 aa8.35□□□□□ -1.07
VPS33A-201ENST00000267199 ATP5EP2Q5VTU8 51 aa8.35□□□□□ -1.07
VPS33A-201ENST00000267199 UBE2DNLQ8IWF7 75 aa8.35□□□□□ -1.07
VPS33A-201ENST00000267199 CHCHD7Q9BUK0 85 aa8.35□□□□□ -1.07
VPS33A-201ENST00000267199 CDC42SE2Q9NRR3 84 aa8.35□□□□□ -1.07
VPS33A-201ENST00000267199 PDE6GP18545 87 aa8.34□□□□□ -1.07
VPS33A-201ENST00000267199 AMELXQ99217 191 aa8.34□□□□□ -1.07
VPS33A-201ENST00000267199 KIF25-AS1Q9Y6Z4 181 aa8.34□□□□□ -1.07
VPS33A-201ENST00000267199 VCANP13611 3396 aa8.34□□□□□ -1.07
VPS33A-201ENST00000267199 BRI3O95415 125 aa8.34□□□□□ -1.07
VPS33A-201ENST00000267199 Q6ZSN1 163 aa8.34□□□□□ -1.07
VPS33A-201ENST00000267199 SVIPQ8NHG7 77 aa8.34□□□□□ -1.07
VPS33A-201ENST00000267199 PRR3P79522 188 aaKnown RBP8.34□□□□□ -1.08
VPS33A-201ENST00000267199 ODF3L2Q3SX64 289 aa8.33□□□□□ -1.08
VPS33A-201ENST00000267199 Q6JHZ5 121 aa8.33□□□□□ -1.08
VPS33A-201ENST00000267199 LINC01546A6NGU7 62 aa8.33□□□□□ -1.08
VPS33A-201ENST00000267199 TRBV6-4A0A1B0GX49 114 aa8.33□□□□□ -1.08
VPS33A-201ENST00000267199 KRTAP10-9P60411 292 aa8.33□□□□□ -1.08
VPS33A-201ENST00000267199 MUC4Q99102 2169 aa8.33□□□□□ -1.08
VPS33A-201ENST00000267199 COL27A1Q8IZC6 1860 aaPredicted RBP8.33□□□□□ -1.08
VPS33A-201ENST00000267199 DSPP15924 2871 aaKnown RBP8.32□□□□□ -1.08
VPS33A-201ENST00000267199 C3orf84H3BNL1 204 aa8.32□□□□□ -1.08
VPS33A-201ENST00000267199 LINC01006Q8NI28 216 aa8.32□□□□□ -1.08
VPS33A-201ENST00000267199 CELSR3Q9NYQ7 3312 aa8.31□□□□□ -1.08
VPS33A-201ENST00000267199 LINC00315P59091 139 aa8.31□□□□□ -1.08
VPS33A-201ENST00000267199 MP68P56378 58 aa8.31□□□□□ -1.08
VPS33A-201ENST00000267199 LINC00846Q9NV44 126 aa8.31□□□□□ -1.08
VPS33A-201ENST00000267199 LINC00959A0A1B0GUT2 108 aa8.3□□□□□ -1.08
VPS33A-201ENST00000267199 NDUFS5O43920 106 aa8.3□□□□□ -1.08
VPS33A-201ENST00000267199 CCKP06307 115 aa8.3□□□□□ -1.08
VPS33A-201ENST00000267199 Q8N2B8 174 aa8.3□□□□□ -1.08
VPS33A-201ENST00000267199 RPL28P46779 137 aaKnown RBP8.3□□□□□ -1.08
VPS33A-201ENST00000267199 FHL3Q13643 280 aa8.3□□□□□ -1.08
VPS33A-201ENST00000267199 ZNF843Q8N446 348 aa8.3□□□□□ -1.08
VPS33A-201ENST00000267199 LINC00482Q8N8I6 264 aa8.3□□□□□ -1.08
VPS33A-201ENST00000267199 PRR4Q16378 134 aa8.3□□□□□ -1.08
VPS33A-201ENST00000267199 BBC3Q96PG8 261 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms