RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 F8W1H4 67 aa11.84□□□□□ -0.51
CHKA-201ENST00000265689 CFC1BP0CG36 223 aa11.84□□□□□ -0.51
CHKA-201ENST00000265689 CFC1P0CG37 223 aa11.84□□□□□ -0.51
CHKA-201ENST00000265689 APOC4P55056 127 aa11.84□□□□□ -0.51
CHKA-201ENST00000265689 TRBV6-8A0A0A6YYG3 113 aa11.84□□□□□ -0.51
CHKA-201ENST00000265689 SMAGPQ0VAQ4 97 aa11.83□□□□□ -0.52
CHKA-201ENST00000265689 MUSTN1Q8IVN3 82 aa11.83□□□□□ -0.52
CHKA-201ENST00000265689 LITAFQ99732 161 aa11.83□□□□□ -0.52
CHKA-201ENST00000265689 GYPEP15421 78 aa11.83□□□□□ -0.52
CHKA-201ENST00000265689 FAM19A3Q7Z5A8 133 aa11.83□□□□□ -0.52
CHKA-201ENST00000265689 A4D1N5 150 aa11.82□□□□□ -0.52
CHKA-201ENST00000265689 ZFAND6Q6FIF0 208 aa11.82□□□□□ -0.52
CHKA-201ENST00000265689 DNAH3Q8TD57 4116 aa11.82□□□□□ -0.52
CHKA-201ENST00000265689 TSPAN13O95857 204 aa11.82□□□□□ -0.52
CHKA-201ENST00000265689 CHCHD5Q9BSY4 110 aa11.82□□□□□ -0.52
CHKA-201ENST00000265689 IGHV4-28A0A0C4DH34 117 aa11.81□□□□□ -0.52
CHKA-201ENST00000265689 H7C423 109 aa11.81□□□□□ -0.52
CHKA-201ENST00000265689 ADAMTSL4-AS1Q5T5F5 129 aa11.81□□□□□ -0.52
CHKA-201ENST00000265689 PRO0461Q9UI25 63 aa11.81□□□□□ -0.52
CHKA-201ENST00000265689 DNHD1Q96M86 4753 aa11.81□□□□□ -0.52
CHKA-201ENST00000265689 IGLV4-60A0A075B6I1 120 aa11.81□□□□□ -0.52
CHKA-201ENST00000265689 LYRM9A8MSI8 78 aa11.8□□□□□ -0.52
CHKA-201ENST00000265689 EIF4EBP3O60516 100 aaPredicted RBP11.8□□□□□ -0.52
CHKA-201ENST00000265689 PRB2P02812 416 aaPredicted RBP11.8□□□□□ -0.52
CHKA-201ENST00000265689 KRTAP10-11P60412 298 aa11.8□□□□□ -0.52
CHKA-201ENST00000265689 IGLV5-39A0A0G2JS06 123 aa11.8□□□□□ -0.52
CHKA-201ENST00000265689 IGHV4-30-4P0DP06 118 aa11.8□□□□□ -0.52
CHKA-201ENST00000265689 ATP6V0E2Q8NHE4 81 aa11.8□□□□□ -0.52
CHKA-201ENST00000265689 IGKV3OR2-268A0A0C4DH90 116 aa11.79□□□□□ -0.52
CHKA-201ENST00000265689 SMIM1B2RUZ4 78 aa11.79□□□□□ -0.52
CHKA-201ENST00000265689 WIPF1O43516 503 aa11.79□□□□□ -0.52
CHKA-201ENST00000265689 PRO0255Q9UI72 69 aa11.79□□□□□ -0.52
CHKA-201ENST00000265689 A0A096LPF7 62 aa11.79□□□□□ -0.52
CHKA-201ENST00000265689 MDFIQ99750 246 aa11.79□□□□□ -0.52
CHKA-201ENST00000265689 PRSS2P07478 247 aa11.78□□□□□ -0.52
CHKA-201ENST00000265689 F5H768 121 aa11.78□□□□□ -0.52
CHKA-201ENST00000265689 NDUFA1O15239 70 aa11.78□□□□□ -0.52
CHKA-201ENST00000265689 Q8NAQ8 132 aa11.77□□□□□ -0.53
CHKA-201ENST00000265689 CELA1Q9UNI1 258 aa11.77□□□□□ -0.53
CHKA-201ENST00000265689 GAGE12HA6NDE8 117 aa11.77□□□□□ -0.53
CHKA-201ENST00000265689 PRO1854Q9UHT4 67 aa11.77□□□□□ -0.53
CHKA-201ENST00000265689 LOC107984156A0A0G2JMH3 177 aa11.76□□□□□ -0.53
CHKA-201ENST00000265689 PAX4O43316 350 aa11.76□□□□□ -0.53
CHKA-201ENST00000265689 NPC2P61916 151 aa11.76□□□□□ -0.53
CHKA-201ENST00000265689 ARL17AQ8IVW1 177 aa11.76□□□□□ -0.53
CHKA-201ENST00000265689 Q9H8V8 135 aa11.76□□□□□ -0.53
CHKA-201ENST00000265689 SPANXDQ9BXN6 97 aa11.76□□□□□ -0.53
CHKA-201ENST00000265689 SPANXCQ9NY87 97 aa11.76□□□□□ -0.53
CHKA-201ENST00000265689 DAD1P61803 113 aa11.75□□□□□ -0.53
CHKA-201ENST00000265689 MIAQ16674 131 aa11.75□□□□□ -0.53
CHKA-201ENST00000265689 ZNF625Q96I27 306 aaPredicted RBP11.75□□□□□ -0.53
CHKA-201ENST00000265689 PSMB2P49721 201 aa11.75□□□□□ -0.53
CHKA-201ENST00000265689 SMCPP49901 116 aaPredicted RBP11.75□□□□□ -0.53
CHKA-201ENST00000265689 DAND5Q8N907 189 aa11.75□□□□□ -0.53
CHKA-201ENST00000265689 SIGMAR1Q99720 223 aa11.75□□□□□ -0.53
CHKA-201ENST00000265689 MIFP14174 115 aa11.74□□□□□ -0.53
CHKA-201ENST00000265689 RNF183Q96D59 192 aa11.74□□□□□ -0.53
CHKA-201ENST00000265689 COL7A1Q02388 2944 aa11.74□□□□□ -0.53
CHKA-201ENST00000265689 J3QR89 54 aa11.73□□□□□ -0.53
CHKA-201ENST00000265689 A0A0B4J2C4 111 aa11.73□□□□□ -0.53
CHKA-201ENST00000265689 TMEM262E9PQX1 116 aa11.73□□□□□ -0.53
CHKA-201ENST00000265689 H7C2G1 150 aa11.72□□□□□ -0.53
CHKA-201ENST00000265689 TIMM17BO60830 172 aa11.72□□□□□ -0.53
CHKA-201ENST00000265689 IGHV3-33P01772 117 aa11.72□□□□□ -0.53
CHKA-201ENST00000265689 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.71□□□□□ -0.53
CHKA-201ENST00000265689 SHISA2Q6UWI4 295 aa11.71□□□□□ -0.53
CHKA-201ENST00000265689 A0A0U1RRA0 63 aa11.71□□□□□ -0.53
CHKA-201ENST00000265689 SPATA25Q9BR10 227 aa11.7□□□□□ -0.54
CHKA-201ENST00000265689 TRAV26-1A0A087WT03 109 aa11.69□□□□□ -0.54
CHKA-201ENST00000265689 ATP5G1P05496 136 aa11.69□□□□□ -0.54
CHKA-201ENST00000265689 SPART-AS1P0CW21 52 aa11.69□□□□□ -0.54
CHKA-201ENST00000265689 HTN3P15516 51 aa11.69□□□□□ -0.54
CHKA-201ENST00000265689 RETNQ9HD89 108 aa11.69□□□□□ -0.54
CHKA-201ENST00000265689 ERG28Q9UKR5 140 aa11.69□□□□□ -0.54
CHKA-201ENST00000265689 CIRBPQ14011 172 aaKnown RBP11.68□□□□□ -0.54
CHKA-201ENST00000265689 IGHV3OR16-9A0A0B4J2B5 98 aa11.68□□□□□ -0.54
CHKA-201ENST00000265689 LINC00959A0A1B0GUT2 108 aa11.68□□□□□ -0.54
CHKA-201ENST00000265689 FOXI1Q12951 378 aa11.68□□□□□ -0.54
CHKA-201ENST00000265689 TCL1BO95988 128 aa11.67□□□□□ -0.54
CHKA-201ENST00000265689 SCGB1C2P0DMR2 95 aa11.67□□□□□ -0.54
CHKA-201ENST00000265689 CLPSL2Q6UWE3 100 aa11.67□□□□□ -0.54
CHKA-201ENST00000265689 C5orf38Q86SI9 138 aa11.67□□□□□ -0.54
CHKA-201ENST00000265689 TOMM7Q9P0U1 55 aa11.67□□□□□ -0.54
CHKA-201ENST00000265689 A0A1B0GUV1 79 aa11.66□□□□□ -0.54
CHKA-201ENST00000265689 IFITM1P13164 125 aa11.66□□□□□ -0.54
CHKA-201ENST00000265689 Q1RN00 199 aa11.66□□□□□ -0.54
CHKA-201ENST00000265689 MEIG1Q5JSS6 88 aa11.66□□□□□ -0.54
CHKA-201ENST00000265689 LYRM7Q5U5X0 104 aa11.66□□□□□ -0.54
CHKA-201ENST00000265689 COX7B2Q8TF08 81 aa11.66□□□□□ -0.54
CHKA-201ENST00000265689 Q8N3U1 123 aa11.65□□□□□ -0.54
CHKA-201ENST00000265689 LINC00308Q8TCZ7 52 aa11.65□□□□□ -0.54
CHKA-201ENST00000265689 A0A087WZ39 114 aa11.64□□□□□ -0.55
CHKA-201ENST00000265689 HERV-K104P63124 156 aa11.64□□□□□ -0.55
CHKA-201ENST00000265689 XCL1P47992 114 aa11.63□□□□□ -0.55
CHKA-201ENST00000265689 SOSTDC1Q6X4U4 206 aa11.63□□□□□ -0.55
CHKA-201ENST00000265689 EGFEM1PQ0D2K5 195 aa11.62□□□□□ -0.55
CHKA-201ENST00000265689 CARD19Q96LW7 228 aa11.62□□□□□ -0.55
CHKA-201ENST00000265689 TRBV20-1A0A075B6N2 111 aa11.62□□□□□ -0.55
CHKA-201ENST00000265689 SCGB1A1P11684 91 aa11.61□□□□□ -0.55
CHKA-201ENST00000265689 SS18Q15532 418 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms