RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 Q8N2B8 174 aa12.06□□□□□ -0.48
PHRF1-201ENST00000264555 ABCA12Q86UK0 2595 aa12.06□□□□□ -0.48
PHRF1-201ENST00000264555 A0A1B0GX51 115 aa12.06□□□□□ -0.48
PHRF1-201ENST00000264555 KIF25-AS1Q9Y6Z4 181 aa12.06□□□□□ -0.48
PHRF1-201ENST00000264555 PTPRBP23467 1997 aa12.05□□□□□ -0.48
PHRF1-201ENST00000264555 J3KT08 172 aa12.05□□□□□ -0.48
PHRF1-201ENST00000264555 LINC01546A6NGU7 62 aa12.05□□□□□ -0.48
PHRF1-201ENST00000264555 LST1O00453 97 aa12.05□□□□□ -0.48
PHRF1-201ENST00000264555 KPRPQ5T749 579 aaPredicted RBP12.04□□□□□ -0.48
PHRF1-201ENST00000264555 CSDC2Q9Y534 153 aaKnown RBP12.04□□□□□ -0.48
PHRF1-201ENST00000264555 SMIM20Q8N5G0 67 aa12.04□□□□□ -0.48
PHRF1-201ENST00000264555 FAM19A4Q96LR4 140 aa12.04□□□□□ -0.48
PHRF1-201ENST00000264555 MT-ATP8P03928 68 aa12.03□□□□□ -0.48
PHRF1-201ENST00000264555 TSPEAR-AS2P59090 65 aa12.03□□□□□ -0.48
PHRF1-201ENST00000264555 C14orf177Q52M58 125 aa12.03□□□□□ -0.48
PHRF1-201ENST00000264555 CLUHP3Q96NS8 147 aa12.03□□□□□ -0.48
PHRF1-201ENST00000264555 IGHV4-30-4P0DP06 118 aa12.03□□□□□ -0.48
PHRF1-201ENST00000264555 SMIM1B2RUZ4 78 aa12.02□□□□□ -0.48
PHRF1-201ENST00000264555 Q8IZM0 81 aa12.02□□□□□ -0.48
PHRF1-201ENST00000264555 XAGE1AQ9HD64 81 aa12.02□□□□□ -0.48
PHRF1-201ENST00000264555 NDUFC2O95298 119 aa12.02□□□□□ -0.49
PHRF1-201ENST00000264555 Q6ZSN1 163 aa12.02□□□□□ -0.49
PHRF1-201ENST00000264555 TRAV10A0A0B4J240 114 aa12.02□□□□□ -0.49
PHRF1-201ENST00000264555 UBE2AP49459 152 aa12.02□□□□□ -0.49
PHRF1-201ENST00000264555 SLPIP03973 132 aa12.01□□□□□ -0.49
PHRF1-201ENST00000264555 COX17Q14061 63 aa12.01□□□□□ -0.49
PHRF1-201ENST00000264555 IL17DQ8TAD2 202 aa12.01□□□□□ -0.49
PHRF1-201ENST00000264555 LINC00694P0DN24 101 aa12.01□□□□□ -0.49
PHRF1-201ENST00000264555 FHL2Q14192 279 aa12.01□□□□□ -0.49
PHRF1-201ENST00000264555 C6orf99Q4VX62 202 aa12.01□□□□□ -0.49
PHRF1-201ENST00000264555 KLK9Q2XQG4 91 aa12□□□□□ -0.49
PHRF1-201ENST00000264555 SYCNQ0VAF6 134 aa12□□□□□ -0.49
PHRF1-201ENST00000264555 CHD9Q3L8U1 2897 aa12□□□□□ -0.49
PHRF1-201ENST00000264555 BPTFQ12830 3046 aa11.99□□□□□ -0.49
PHRF1-201ENST00000264555 ZNF462Q96JM2 2506 aa11.99□□□□□ -0.49
PHRF1-201ENST00000264555 COX6A2Q02221 97 aa11.99□□□□□ -0.49
PHRF1-201ENST00000264555 SMIM11BQ8TCY0 68 aa11.98□□□□□ -0.49
PHRF1-201ENST00000264555 OXLD1Q5BKU9 147 aa11.97□□□□□ -0.49
PHRF1-201ENST00000264555 MUC7Q8TAX7 377 aa11.97□□□□□ -0.49
PHRF1-201ENST00000264555 A0A087WZ39 114 aa11.97□□□□□ -0.49
PHRF1-201ENST00000264555 IGKV2-24A0A0C4DH68 120 aa11.97□□□□□ -0.49
PHRF1-201ENST00000264555 LINC00315P59091 139 aa11.97□□□□□ -0.49
PHRF1-201ENST00000264555 C5orf42Q9H799 3197 aa11.96□□□□□ -0.49
PHRF1-201ENST00000264555 LINC00526Q96FQ7 95 aa11.96□□□□□ -0.49
PHRF1-201ENST00000264555 IGLV4-60A0A075B6I1 120 aa11.95□□□□□ -0.5
PHRF1-201ENST00000264555 TRAV23DV6A0A075B6W5 121 aa11.95□□□□□ -0.5
PHRF1-201ENST00000264555 NDUFV3P56181 108 aaKnown RBP11.95□□□□□ -0.5
PHRF1-201ENST00000264555 C11orf72Q8NBR9 251 aa11.95□□□□□ -0.5
PHRF1-201ENST00000264555 COL27A1Q8IZC6 1860 aaPredicted RBP11.94□□□□□ -0.5
PHRF1-201ENST00000264555 LRRK2Q5S007 2527 aa11.94□□□□□ -0.5
PHRF1-201ENST00000264555 PRRC2CQ9Y520 2896 aaKnown RBP11.94□□□□□ -0.5
PHRF1-201ENST00000264555 ADAMTSL4-AS1Q5T5F5 129 aa11.93□□□□□ -0.5
PHRF1-201ENST00000264555 SETD2Q9BYW2 2564 aaPredicted RBP11.93□□□□□ -0.5
PHRF1-201ENST00000264555 JMJD1CQ15652 2540 aa11.92□□□□□ -0.5
PHRF1-201ENST00000264555 M0R378 163 aa11.92□□□□□ -0.5
PHRF1-201ENST00000264555 NDUFB1O75438 58 aa11.92□□□□□ -0.5
PHRF1-201ENST00000264555 ATP5EP2Q5VTU8 51 aa11.91□□□□□ -0.5
PHRF1-201ENST00000264555 CYSRT1A8MQ03 144 aa11.91□□□□□ -0.5
PHRF1-201ENST00000264555 DOPEY1Q5JWR5 2465 aa11.91□□□□□ -0.5
PHRF1-201ENST00000264555 SDIM1Q6ZPB5 146 aa11.91□□□□□ -0.5
PHRF1-201ENST00000264555 A0A0J9YWU9 116 aa11.9□□□□□ -0.5
PHRF1-201ENST00000264555 UPK3BQ9BT76 320 aa11.9□□□□□ -0.5
PHRF1-201ENST00000264555 B9D2Q9BPU9 175 aa11.9□□□□□ -0.5
PHRF1-201ENST00000264555 NANOS2P60321 138 aaKnown RBP11.9□□□□□ -0.51
PHRF1-201ENST00000264555 RNF183Q96D59 192 aa11.89□□□□□ -0.51
PHRF1-201ENST00000264555 A0A1B0GUV1 79 aa11.89□□□□□ -0.51
PHRF1-201ENST00000264555 HIGD2AQ9BW72 106 aa11.89□□□□□ -0.51
PHRF1-201ENST00000264555 NDUFS5O43920 106 aa11.88□□□□□ -0.51
PHRF1-201ENST00000264555 PKD1L2Q7Z442 2459 aa11.88□□□□□ -0.51
PHRF1-201ENST00000264555 BPY2O14599 106 aa11.88□□□□□ -0.51
PHRF1-201ENST00000264555 Q6ZQY7 126 aa11.88□□□□□ -0.51
PHRF1-201ENST00000264555 FN1P02751 2386 aaKnown RBP11.87□□□□□ -0.51
PHRF1-201ENST00000264555 RPL28P46779 137 aaKnown RBP11.87□□□□□ -0.51
PHRF1-201ENST00000264555 FHL3Q13643 280 aa11.87□□□□□ -0.51
PHRF1-201ENST00000264555 ZFYVE26Q68DK2 2539 aa11.87□□□□□ -0.51
PHRF1-201ENST00000264555 FAM19A5Q7Z5A7 132 aaPredicted RBP11.87□□□□□ -0.51
PHRF1-201ENST00000264555 UNQ6190/PRO20217Q6UXQ8 127 aa11.87□□□□□ -0.51
PHRF1-201ENST00000264555 MP68P56378 58 aa11.86□□□□□ -0.51
PHRF1-201ENST00000264555 FAM19A1Q7Z5A9 133 aa11.86□□□□□ -0.51
PHRF1-201ENST00000264555 C5orf47Q569G3 176 aa11.85□□□□□ -0.51
PHRF1-201ENST00000264555 IMUPQ9GZP8 106 aa11.85□□□□□ -0.51
PHRF1-201ENST00000264555 ZNF73O43830 326 aaPredicted RBP11.85□□□□□ -0.51
PHRF1-201ENST00000264555 FSHBP01225 129 aa11.85□□□□□ -0.51
PHRF1-201ENST00000264555 XGP55808 180 aa11.84□□□□□ -0.51
PHRF1-201ENST00000264555 RETNQ9HD89 108 aa11.84□□□□□ -0.51
PHRF1-201ENST00000264555 IGKV2-28A0A075B6P5 120 aa11.84□□□□□ -0.51
PHRF1-201ENST00000264555 IGKV2D-28P01615 120 aa11.84□□□□□ -0.51
PHRF1-201ENST00000264555 WFDC9Q8NEX5 89 aa11.84□□□□□ -0.51
PHRF1-201ENST00000264555 POLQO75417 2590 aa11.84□□□□□ -0.51
PHRF1-201ENST00000264555 EGFEM1PQ0D2K5 195 aa11.83□□□□□ -0.52
PHRF1-201ENST00000264555 ENHOQ6UWT2 76 aa11.82□□□□□ -0.52
PHRF1-201ENST00000264555 UQCRQO14949 82 aa11.82□□□□□ -0.52
PHRF1-201ENST00000264555 DHRS4-AS1Q9P1J3 65 aa11.82□□□□□ -0.52
PHRF1-201ENST00000264555 RANBP2P49792 3224 aaKnown RBP11.82□□□□□ -0.52
PHRF1-201ENST00000264555 C9orf116Q5BN46 136 aaPredicted RBP11.82□□□□□ -0.52
PHRF1-201ENST00000264555 FAM240AA0A1B0GVK7 77 aa11.81□□□□□ -0.52
PHRF1-201ENST00000264555 LINC01561Q8N1V8 128 aa11.81□□□□□ -0.52
PHRF1-201ENST00000264555 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.81□□□□□ -0.52
PHRF1-201ENST00000264555 PRB2P02812 416 aaPredicted RBP11.81□□□□□ -0.52
PHRF1-201ENST00000264555 Q6ZTC4 211 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 240.5 ms