RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 LY6G6DO95868 133 aa6.24□□□□□ -1.41
LDB3-201ENST00000263066 TRBV12-3P01733 135 aa6.24□□□□□ -1.41
LDB3-201ENST00000263066 MIAQ16674 131 aa6.24□□□□□ -1.41
LDB3-201ENST00000263066 TMEM61Q8N0U2 210 aa6.24□□□□□ -1.41
LDB3-201ENST00000263066 TRBV7-6A0A0J9YX20 115 aa6.24□□□□□ -1.41
LDB3-201ENST00000263066 C6orf226Q5I0X4 101 aa6.24□□□□□ -1.41
LDB3-201ENST00000263066 FSTL3O95633 263 aa6.24□□□□□ -1.41
LDB3-201ENST00000263066 C19orf54Q5BKX5 351 aa6.24□□□□□ -1.41
LDB3-201ENST00000263066 VSIG2Q96IQ7 327 aa6.24□□□□□ -1.41
LDB3-201ENST00000263066 PSMG3-AS1Q96PY0 264 aa6.24□□□□□ -1.41
LDB3-201ENST00000263066 PAX4O43316 350 aa6.23□□□□□ -1.41
LDB3-201ENST00000263066 GNRH2O43555 120 aa6.23□□□□□ -1.41
LDB3-201ENST00000263066 HOXB4P17483 251 aaPredicted RBP6.23□□□□□ -1.41
LDB3-201ENST00000263066 RMI2Q96E14 147 aa6.23□□□□□ -1.41
LDB3-201ENST00000263066 Q9H8V8 135 aa6.23□□□□□ -1.41
LDB3-201ENST00000263066 LECT2O14960 151 aa6.23□□□□□ -1.41
LDB3-201ENST00000263066 C10orf99Q6UWK7 81 aa6.23□□□□□ -1.41
LDB3-201ENST00000263066 C5orf38Q86SI9 138 aa6.23□□□□□ -1.41
LDB3-201ENST00000263066 LINC00846Q9NV44 126 aa6.23□□□□□ -1.41
LDB3-201ENST00000263066 FBN2P35556 2912 aa6.23□□□□□ -1.41
LDB3-201ENST00000263066 IGLV4-69A0A075B6H9 119 aa6.23□□□□□ -1.41
LDB3-201ENST00000263066 F6UB75 175 aa6.23□□□□□ -1.41
LDB3-201ENST00000263066 LINC00158P58513 81 aa6.23□□□□□ -1.41
LDB3-201ENST00000263066 RPL36AP83881 106 aaKnown RBP6.23□□□□□ -1.41
LDB3-201ENST00000263066 ADAMTSL4-AS1Q5T5F5 129 aa6.23□□□□□ -1.41
LDB3-201ENST00000263066 RPL36ALQ969Q0 106 aaKnown RBP6.23□□□□□ -1.41
LDB3-201ENST00000263066 NF1P21359 2839 aa6.23□□□□□ -1.41
LDB3-201ENST00000263066 Q6JHZ5 121 aa6.22□□□□□ -1.41
LDB3-201ENST00000263066 FAM19A1Q7Z5A9 133 aa6.22□□□□□ -1.41
LDB3-201ENST00000263066 RAI1Q7Z5J4 1906 aaPredicted RBP6.22□□□□□ -1.41
LDB3-201ENST00000263066 TIMM17AQ99595 171 aa6.22□□□□□ -1.41
LDB3-201ENST00000263066 LAMTOR3Q9UHA4 124 aa6.22□□□□□ -1.41
LDB3-201ENST00000263066 SLPIP03973 132 aa6.22□□□□□ -1.41
LDB3-201ENST00000263066 C11orf71Q6IPW1 123 aa6.22□□□□□ -1.41
LDB3-201ENST00000263066 ZNF833PQ6ZTB9 187 aa6.22□□□□□ -1.41
LDB3-201ENST00000263066 A0A087WZ39 114 aa6.21□□□□□ -1.41
LDB3-201ENST00000263066 IGHV4-31P0DP07 118 aa6.21□□□□□ -1.41
LDB3-201ENST00000263066 TMEM30BQ3MIR4 351 aa6.21□□□□□ -1.41
LDB3-201ENST00000263066 OVOL3O00110 214 aa6.21□□□□□ -1.42
LDB3-201ENST00000263066 OVOL2Q9BRP0 275 aa6.21□□□□□ -1.42
LDB3-201ENST00000263066 APCP25054 2843 aa6.21□□□□□ -1.42
LDB3-201ENST00000263066 C11orf21Q9P2W6 132 aa6.21□□□□□ -1.42
LDB3-201ENST00000263066 KAAG1Q9UBP8 84 aa6.21□□□□□ -1.42
LDB3-201ENST00000263066 HIVEP1P15822 2718 aa6.2□□□□□ -1.42
LDB3-201ENST00000263066 PIK3CD-AS1Q5SR53 167 aa6.2□□□□□ -1.42
LDB3-201ENST00000263066 I3L2K1 104 aa6.19□□□□□ -1.42
LDB3-201ENST00000263066 SUMO4Q6EEV6 95 aa6.19□□□□□ -1.42
LDB3-201ENST00000263066 K7EIM0 57 aa6.19□□□□□ -1.42
LDB3-201ENST00000263066 PSPHP1O15172 72 aa6.19□□□□□ -1.42
LDB3-201ENST00000263066 CCKP06307 115 aa6.19□□□□□ -1.42
LDB3-201ENST00000263066 DCANP1Q8TF63 244 aa6.19□□□□□ -1.42
LDB3-201ENST00000263066 IGHV1-58A0A0C4DH39 117 aa6.18□□□□□ -1.42
LDB3-201ENST00000263066 DEFB1P60022 68 aa6.18□□□□□ -1.42
LDB3-201ENST00000263066 MRPS36P82909 103 aaKnown RBP6.18□□□□□ -1.42
LDB3-201ENST00000263066 MINOS1Q5TGZ0 78 aa6.18□□□□□ -1.42
LDB3-201ENST00000263066 KLK9Q9UKQ9 250 aa6.18□□□□□ -1.42
LDB3-201ENST00000263066 MINOS1-NBL1R4GNA1 71 aa6.18□□□□□ -1.42
LDB3-201ENST00000263066 TRBV27A0A0K0K1C4 114 aa6.18□□□□□ -1.42
LDB3-201ENST00000263066 HTN3P15516 51 aa6.18□□□□□ -1.42
LDB3-201ENST00000263066 CNFNQ9BYD5 112 aa6.18□□□□□ -1.42
LDB3-201ENST00000263066 ORMDL1Q9P0S3 153 aa6.18□□□□□ -1.42
LDB3-201ENST00000263066 TRAV13-2A0A0B4J235 113 aa6.17□□□□□ -1.42
LDB3-201ENST00000263066 TEX22C9J3V5 150 aa6.17□□□□□ -1.42
LDB3-201ENST00000263066 RPL28P46779 137 aaKnown RBP6.17□□□□□ -1.42
LDB3-201ENST00000263066 IGIPA6NJ69 53 aa6.17□□□□□ -1.42
LDB3-201ENST00000263066 FUSP35637 526 aaKnown RBP eCLIP6.17□□□□□ -1.42
LDB3-201ENST00000263066 SCXQ7RTU7 201 aa6.17□□□□□ -1.42
LDB3-201ENST00000263066 LINC00308Q8TCZ7 52 aa6.16□□□□□ -1.42
LDB3-201ENST00000263066 EIF4EBP3O60516 100 aaPredicted RBP6.16□□□□□ -1.42
LDB3-201ENST00000263066 IGF1P05019 195 aa6.16□□□□□ -1.42
LDB3-201ENST00000263066 NSD1Q96L73 2696 aaPredicted RBP6.16□□□□□ -1.42
LDB3-201ENST00000263066 IGHV3-38A0A0C4DH36 116 aa6.16□□□□□ -1.42
LDB3-201ENST00000263066 IGHV7-4-1A0A0J9YVY3 117 aa6.16□□□□□ -1.42
LDB3-201ENST00000263066 DNAJC9-AS1A6NH13 148 aa6.16□□□□□ -1.42
LDB3-201ENST00000263066 TSHBP01222 138 aa6.16□□□□□ -1.42
LDB3-201ENST00000263066 IGLV2-23P01705 113 aa6.16□□□□□ -1.42
LDB3-201ENST00000263066 ANK3Q12955 4377 aaKnown RBP6.15□□□□□ -1.42
LDB3-201ENST00000263066 TRAV7A0A075B6U4 112 aa6.15□□□□□ -1.42
LDB3-201ENST00000263066 C4orf48Q5BLP8 95 aa6.15□□□□□ -1.42
LDB3-201ENST00000263066 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.15□□□□□ -1.42
LDB3-201ENST00000263066 IGKV2-29A2NJV5 120 aaPredicted RBP6.15□□□□□ -1.42
LDB3-201ENST00000263066 LINC01546A6NGU7 62 aa6.15□□□□□ -1.42
LDB3-201ENST00000263066 UBE2D4Q9Y2X8 147 aa6.15□□□□□ -1.42
LDB3-201ENST00000263066 IGLV1-47P01700 117 aa6.15□□□□□ -1.43
LDB3-201ENST00000263066 MIFP14174 115 aa6.15□□□□□ -1.43
LDB3-201ENST00000263066 SLURP1P55000 103 aa6.15□□□□□ -1.43
LDB3-201ENST00000263066 CD164Q04900 197 aa6.14□□□□□ -1.43
LDB3-201ENST00000263066 STHQ8IWL8 128 aa6.14□□□□□ -1.43
LDB3-201ENST00000263066 UBE2E2Q96LR5 201 aa6.14□□□□□ -1.43
LDB3-201ENST00000263066 MRPL53Q96EL3 112 aaKnown RBP6.14□□□□□ -1.43
LDB3-201ENST00000263066 SND1-IT1Q9HBX3 110 aa6.14□□□□□ -1.43
LDB3-201ENST00000263066 C20orf203Q8NBC4 194 aa6.14□□□□□ -1.43
LDB3-201ENST00000263066 IGHV7-81A0A0B4J1V7 117 aa6.13□□□□□ -1.43
LDB3-201ENST00000263066 IGLV4-3A0A075B6K6 122 aa6.13□□□□□ -1.43
LDB3-201ENST00000263066 CGB3P0DN86 165 aa6.13□□□□□ -1.43
LDB3-201ENST00000263066 CGB7P0DN87 165 aa6.13□□□□□ -1.43
LDB3-201ENST00000263066 PRR4Q16378 134 aa6.13□□□□□ -1.43
LDB3-201ENST00000263066 MIR7-3HGQ8N6C7 128 aa6.13□□□□□ -1.43
LDB3-201ENST00000263066 Q8N9W7 124 aa6.13□□□□□ -1.43
LDB3-201ENST00000263066 NDUFC1O43677 76 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms