RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 TMEM243Q9BU79 118 aa11.55□□□□□ -0.56
PRPF40B-201ENST00000261897 CRYBG3Q68DQ2 2970 aa11.55□□□□□ -0.56
PRPF40B-201ENST00000261897 TRAV13-2A0A0B4J235 113 aa11.54□□□□□ -0.56
PRPF40B-201ENST00000261897 IGHG2P01859 326 aa11.54□□□□□ -0.56
PRPF40B-201ENST00000261897 RPL18AQ02543 176 aaKnown RBP11.54□□□□□ -0.56
PRPF40B-201ENST00000261897 RBMY1FQ15415 496 aaKnown RBP11.54□□□□□ -0.56
PRPF40B-201ENST00000261897 LINC00242Q5T6M2 205 aa11.54□□□□□ -0.56
PRPF40B-201ENST00000261897 CHCHD7Q9BUK0 85 aa11.54□□□□□ -0.56
PRPF40B-201ENST00000261897 IMUPQ9GZP8 106 aa11.54□□□□□ -0.56
PRPF40B-201ENST00000261897 LAMTOR3Q9UHA4 124 aa11.54□□□□□ -0.56
PRPF40B-201ENST00000261897 CYSTM1Q9H1C7 97 aa11.54□□□□□ -0.56
PRPF40B-201ENST00000261897 CXCL5P42830 114 aa11.53□□□□□ -0.56
PRPF40B-201ENST00000261897 ENHOQ6UWT2 76 aa11.53□□□□□ -0.56
PRPF40B-201ENST00000261897 C9orf129Q5T035 196 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-201ENST00000261897 ANKRD17O75179 2603 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-201ENST00000261897 PKIGQ9Y2B9 76 aa11.53□□□□□ -0.56
PRPF40B-201ENST00000261897 SMIM11BQ8TCY0 68 aa11.52□□□□□ -0.56
PRPF40B-201ENST00000261897 TRGV4A0A0C4DH28 118 aa11.52□□□□□ -0.57
PRPF40B-201ENST00000261897 K7EQG2 157 aa11.52□□□□□ -0.57
PRPF40B-201ENST00000261897 XCL1P47992 114 aa11.52□□□□□ -0.57
PRPF40B-201ENST00000261897 STHQ8IWL8 128 aa11.52□□□□□ -0.57
PRPF40B-201ENST00000261897 PYGO1Q9Y3Y4 419 aa11.52□□□□□ -0.57
PRPF40B-201ENST00000261897 RPL35AP18077 110 aaKnown RBP11.51□□□□□ -0.57
PRPF40B-201ENST00000261897 CCL19Q99731 98 aa11.51□□□□□ -0.57
PRPF40B-201ENST00000261897 NOP10Q9NPE3 64 aaKnown RBP11.51□□□□□ -0.57
PRPF40B-201ENST00000261897 F5H768 121 aa11.51□□□□□ -0.57
PRPF40B-201ENST00000261897 PRR3P79522 188 aaKnown RBP11.5□□□□□ -0.57
PRPF40B-201ENST00000261897 C18orf65Q6ZTR6 163 aa11.5□□□□□ -0.57
PRPF40B-201ENST00000261897 DEFB112Q30KQ8 113 aa11.5□□□□□ -0.57
PRPF40B-201ENST00000261897 SERP2Q8N6R1 65 aa11.5□□□□□ -0.57
PRPF40B-201ENST00000261897 SMIM1B2RUZ4 78 aa11.49□□□□□ -0.57
PRPF40B-201ENST00000261897 C11orf71Q6IPW1 123 aa11.49□□□□□ -0.57
PRPF40B-201ENST00000261897 Q6ZTI0 123 aa11.49□□□□□ -0.57
PRPF40B-201ENST00000261897 FAM19A1Q7Z5A9 133 aa11.49□□□□□ -0.57
PRPF40B-201ENST00000261897 LINC00337Q8N6G1 96 aa11.49□□□□□ -0.57
PRPF40B-201ENST00000261897 FAM19A4Q96LR4 140 aa11.49□□□□□ -0.57
PRPF40B-201ENST00000261897 SNURFQ9Y675 71 aa11.49□□□□□ -0.57
PRPF40B-201ENST00000261897 INSP01308 110 aa11.48□□□□□ -0.57
PRPF40B-201ENST00000261897 SCXQ7RTU7 201 aa11.48□□□□□ -0.57
PRPF40B-201ENST00000261897 WFDC11Q8NEX6 87 aa11.48□□□□□ -0.57
PRPF40B-201ENST00000261897 LOC100131303A0A0U1RQF7 123 aa11.48□□□□□ -0.57
PRPF40B-201ENST00000261897 DEFB130BP0DP73 79 aa11.48□□□□□ -0.57
PRPF40B-201ENST00000261897 DEFB130AP0DP74 79 aa11.48□□□□□ -0.57
PRPF40B-201ENST00000261897 LRRC75A-AS1Q8N1F1 130 aa11.48□□□□□ -0.57
PRPF40B-201ENST00000261897 GCN1Q92616 2671 aaKnown RBP11.48□□□□□ -0.57
PRPF40B-201ENST00000261897 COX7B2Q8TF08 81 aa11.47□□□□□ -0.57
PRPF40B-201ENST00000261897 IGHV4-30-2A0A087WSY4 118 aa11.47□□□□□ -0.57
PRPF40B-201ENST00000261897 A0A0U1RQV1 116 aa11.47□□□□□ -0.57
PRPF40B-201ENST00000261897 ORMDL1Q9P0S3 153 aa11.47□□□□□ -0.57
PRPF40B-201ENST00000261897 IGLV10-54A0A075B6I4 117 aa11.46□□□□□ -0.57
PRPF40B-201ENST00000261897 TMEM86BQ8N661 226 aa11.46□□□□□ -0.58
PRPF40B-201ENST00000261897 UBL5Q9BZL1 73 aa11.46□□□□□ -0.58
PRPF40B-201ENST00000261897 RBM3P98179 157 aaKnown RBP11.45□□□□□ -0.58
PRPF40B-201ENST00000261897 FBN2P35556 2912 aa11.45□□□□□ -0.58
PRPF40B-201ENST00000261897 MSMBP08118 114 aa11.45□□□□□ -0.58
PRPF40B-201ENST00000261897 S100A7L2Q5SY68 101 aa11.45□□□□□ -0.58
PRPF40B-201ENST00000261897 ZNF462Q96JM2 2506 aa11.44□□□□□ -0.58
PRPF40B-201ENST00000261897 K7ENP7 123 aa11.44□□□□□ -0.58
PRPF40B-201ENST00000261897 PRO3102Q9H379 93 aa11.44□□□□□ -0.58
PRPF40B-201ENST00000261897 AVPP01185 164 aa11.43□□□□□ -0.58
PRPF40B-201ENST00000261897 DPH3Q96FX2 82 aa11.43□□□□□ -0.58
PRPF40B-201ENST00000261897 K7EMT4 169 aa11.43□□□□□ -0.58
PRPF40B-201ENST00000261897 PRB2P02812 416 aaPredicted RBP11.43□□□□□ -0.58
PRPF40B-201ENST00000261897 CCL18P55774 89 aa11.43□□□□□ -0.58
PRPF40B-201ENST00000261897 A6NDX4 124 aa11.42□□□□□ -0.58
PRPF40B-201ENST00000261897 C19orf84I3L1E1 186 aa11.42□□□□□ -0.58
PRPF40B-201ENST00000261897 NBL1P41271 181 aa11.42□□□□□ -0.58
PRPF40B-201ENST00000261897 TIMM17BO60830 172 aa11.42□□□□□ -0.58
PRPF40B-201ENST00000261897 ESM1Q9NQ30 184 aa11.42□□□□□ -0.58
PRPF40B-201ENST00000261897 FLNCQ14315 2725 aa11.42□□□□□ -0.58
PRPF40B-201ENST00000261897 PLA2G2AP14555 144 aa11.41□□□□□ -0.58
PRPF40B-201ENST00000261897 MRAPQ8TCY5 172 aa11.41□□□□□ -0.58
PRPF40B-201ENST00000261897 TMEM258P61165 79 aa11.41□□□□□ -0.58
PRPF40B-201ENST00000261897 CSMD2Q7Z408 3487 aa11.41□□□□□ -0.58
PRPF40B-201ENST00000261897 PSMB8P28062 276 aa11.41□□□□□ -0.58
PRPF40B-201ENST00000261897 UPK3BQ9BT76 320 aa11.4□□□□□ -0.58
PRPF40B-201ENST00000261897 GNLYP22749 145 aa11.4□□□□□ -0.58
PRPF40B-201ENST00000261897 DAD1P61803 113 aa11.4□□□□□ -0.58
PRPF40B-201ENST00000261897 FAM104AQ969W3 186 aa11.4□□□□□ -0.58
PRPF40B-201ENST00000261897 A8MTW9 85 aa11.4□□□□□ -0.59
PRPF40B-201ENST00000261897 OVOL2Q9BRP0 275 aa11.39□□□□□ -0.59
PRPF40B-201ENST00000261897 NF1P21359 2839 aa11.39□□□□□ -0.59
PRPF40B-201ENST00000261897 H3BUA1 57 aa11.39□□□□□ -0.59
PRPF40B-201ENST00000261897 K7EQD1 137 aa11.39□□□□□ -0.59
PRPF40B-201ENST00000261897 CRYGAP11844 174 aa11.39□□□□□ -0.59
PRPF40B-201ENST00000261897 Q96MF0 132 aa11.39□□□□□ -0.59
PRPF40B-201ENST00000261897 H0YGX0 51 aa11.39□□□□□ -0.59
PRPF40B-201ENST00000261897 DEFB121Q5J5C9 76 aa11.39□□□□□ -0.59
PRPF40B-201ENST00000261897 MPLKIPQ8TAP9 179 aa11.38□□□□□ -0.59
PRPF40B-201ENST00000261897 BRK1Q8WUW1 75 aa11.37□□□□□ -0.59
PRPF40B-201ENST00000261897 FHL2Q14192 279 aa11.37□□□□□ -0.59
PRPF40B-201ENST00000261897 RPL28P46779 137 aaKnown RBP11.37□□□□□ -0.59
PRPF40B-201ENST00000261897 LINC01561Q8N1V8 128 aa11.37□□□□□ -0.59
PRPF40B-201ENST00000261897 IGLV1-40P01703 118 aa11.36□□□□□ -0.59
PRPF40B-201ENST00000261897 FAM236DA0A1B0GTK5 79 aa11.36□□□□□ -0.59
PRPF40B-201ENST00000261897 FAM236CP0DP71 79 aa11.36□□□□□ -0.59
PRPF40B-201ENST00000261897 HTN3P15516 51 aa11.36□□□□□ -0.59
PRPF40B-201ENST00000261897 WFDC10AQ9H1F0 79 aa11.36□□□□□ -0.59
PRPF40B-201ENST00000261897 MAP6D1Q9H9H5 199 aa11.36□□□□□ -0.59
PRPF40B-201ENST00000261897 CDC42SE2Q9NRR3 84 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms