RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 SPART-AS1P0CW21 52 aa12.61□□□□□ -0.39
KLF3-201ENST00000261438 DEFB114Q30KQ6 69 aa12.61□□□□□ -0.39
KLF3-201ENST00000261438 PIEZO2Q9H5I5 2752 aa12.61□□□□□ -0.39
KLF3-201ENST00000261438 FAM19A1Q7Z5A9 133 aa12.61□□□□□ -0.39
KLF3-201ENST00000261438 PRRC2AP48634 2157 aaKnown RBP12.61□□□□□ -0.39
KLF3-201ENST00000261438 C10orf99Q6UWK7 81 aa12.61□□□□□ -0.39
KLF3-201ENST00000261438 C3orf84H3BNL1 204 aa12.6□□□□□ -0.39
KLF3-201ENST00000261438 PRO0628Q9UI54 55 aa12.6□□□□□ -0.39
KLF3-201ENST00000261438 Q8N814 137 aa12.6□□□□□ -0.39
KLF3-201ENST00000261438 XAGE1AQ9HD64 81 aa12.6□□□□□ -0.39
KLF3-201ENST00000261438 KIF25-AS1Q9Y6Z4 181 aa12.59□□□□□ -0.39
KLF3-201ENST00000261438 FHL3Q13643 280 aa12.59□□□□□ -0.39
KLF3-201ENST00000261438 DEFB4AO15263 64 aa12.58□□□□□ -0.4
KLF3-201ENST00000261438 LINC00959A0A1B0GUT2 108 aa12.58□□□□□ -0.4
KLF3-201ENST00000261438 PRORYQ9H606 182 aa12.58□□□□□ -0.4
KLF3-201ENST00000261438 HILS1P60008 231 aa12.58□□□□□ -0.4
KLF3-201ENST00000261438 C4orf26Q17RF5 130 aa12.58□□□□□ -0.4
KLF3-201ENST00000261438 KIR2DL5BQ8NHK3 375 aa12.57□□□□□ -0.4
KLF3-201ENST00000261438 PRR4Q16378 134 aa12.57□□□□□ -0.4
KLF3-201ENST00000261438 C11orf71Q6IPW1 123 aa12.56□□□□□ -0.4
KLF3-201ENST00000261438 CUL9Q8IWT3 2517 aa12.56□□□□□ -0.4
KLF3-201ENST00000261438 CHKB-CPT1BH3BT56 60 aa12.56□□□□□ -0.4
KLF3-201ENST00000261438 MYO18BQ8IUG5 2567 aa12.56□□□□□ -0.4
KLF3-201ENST00000261438 C1orf158Q8N1D5 194 aa12.56□□□□□ -0.4
KLF3-201ENST00000261438 Q8N3U1 123 aa12.56□□□□□ -0.4
KLF3-201ENST00000261438 ADAMTS20P59510 1910 aa12.55□□□□□ -0.4
KLF3-201ENST00000261438 CEP192Q8TEP8 1941 aa12.55□□□□□ -0.4
KLF3-201ENST00000261438 LOC100131303A0A0U1RQF7 123 aa12.55□□□□□ -0.4
KLF3-201ENST00000261438 IGLV1-40P01703 118 aa12.55□□□□□ -0.4
KLF3-201ENST00000261438 EDN2P20800 178 aa12.55□□□□□ -0.4
KLF3-201ENST00000261438 NHLRC4P0CG21 123 aaPredicted RBP12.55□□□□□ -0.4
KLF3-201ENST00000261438 SONP18583 2426 aaKnown RBP12.54□□□□□ -0.4
KLF3-201ENST00000261438 MUC6Q6W4X9 2439 aa12.53□□□□□ -0.4
KLF3-201ENST00000261438 CD164L2Q6UWJ8 174 aa12.53□□□□□ -0.4
KLF3-201ENST00000261438 MYO9AB2RTY4 2548 aa12.53□□□□□ -0.4
KLF3-201ENST00000261438 LRCOL1A6NCL2 159 aa12.53□□□□□ -0.4
KLF3-201ENST00000261438 DEFB135Q30KP9 77 aa12.53□□□□□ -0.4
KLF3-201ENST00000261438 Q8IZM0 81 aa12.53□□□□□ -0.4
KLF3-201ENST00000261438 COX17Q14061 63 aa12.52□□□□□ -0.41
KLF3-201ENST00000261438 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.51□□□□□ -0.41
KLF3-201ENST00000261438 LINC00315P59091 139 aa12.51□□□□□ -0.41
KLF3-201ENST00000261438 LINC00337Q8N6G1 96 aa12.51□□□□□ -0.41
KLF3-201ENST00000261438 Q8N2B8 174 aa12.5□□□□□ -0.41
KLF3-201ENST00000261438 FAM30AQ9NZY2 134 aa12.5□□□□□ -0.41
KLF3-201ENST00000261438 TRBV7-6A0A0J9YX20 115 aa12.5□□□□□ -0.41
KLF3-201ENST00000261438 H0Y9J4 135 aa12.5□□□□□ -0.41
KLF3-201ENST00000261438 PRYO14603 147 aa12.5□□□□□ -0.41
KLF3-201ENST00000261438 PRR3P79522 188 aaKnown RBP12.49□□□□□ -0.41
KLF3-201ENST00000261438 CELA1Q9UNI1 258 aa12.49□□□□□ -0.41
KLF3-201ENST00000261438 A6NED7 52 aa12.48□□□□□ -0.41
KLF3-201ENST00000261438 A0A087WZ39 114 aa12.47□□□□□ -0.41
KLF3-201ENST00000261438 ZNF73O43830 326 aaPredicted RBP12.47□□□□□ -0.41
KLF3-201ENST00000261438 Q6ZSN1 163 aa12.47□□□□□ -0.41
KLF3-201ENST00000261438 WFDC10BQ8IUB3 73 aa12.47□□□□□ -0.41
KLF3-201ENST00000261438 PTPRBP23467 1997 aa12.47□□□□□ -0.41
KLF3-201ENST00000261438 TRBV10-3A0A0K0K1G6 114 aa12.47□□□□□ -0.41
KLF3-201ENST00000261438 LYRM9A8MSI8 78 aa12.47□□□□□ -0.41
KLF3-201ENST00000261438 PMAIP1Q13794 54 aa12.47□□□□□ -0.41
KLF3-201ENST00000261438 C9orf66Q5T8R8 295 aa12.47□□□□□ -0.41
KLF3-201ENST00000261438 DEFB121Q5J5C9 76 aa12.46□□□□□ -0.41
KLF3-201ENST00000261438 TMEM254Q8TBM7 123 aa12.46□□□□□ -0.41
KLF3-201ENST00000261438 Q6ZVQ6 151 aa12.45□□□□□ -0.42
KLF3-201ENST00000261438 ZNF843Q8N446 348 aa12.45□□□□□ -0.42
KLF3-201ENST00000261438 IGLV5-39A0A0G2JS06 123 aa12.44□□□□□ -0.42
KLF3-201ENST00000261438 LINC01547P58512 204 aaPredicted RBP12.44□□□□□ -0.42
KLF3-201ENST00000261438 Q6YL49 198 aa12.44□□□□□ -0.42
KLF3-201ENST00000261438 FAM218AQ96MZ4 157 aa12.43□□□□□ -0.42
KLF3-201ENST00000261438 M0R378 163 aa12.43□□□□□ -0.42
KLF3-201ENST00000261438 WFDC13Q8IUB5 93 aa12.43□□□□□ -0.42
KLF3-201ENST00000261438 BBC3Q96PG8 261 aaPredicted RBP12.43□□□□□ -0.42
KLF3-201ENST00000261438 RAI1Q7Z5J4 1906 aaPredicted RBP12.42□□□□□ -0.42
KLF3-201ENST00000261438 IGLV4-60A0A075B6I1 120 aa12.42□□□□□ -0.42
KLF3-201ENST00000261438 DEFB113Q30KQ7 82 aa12.41□□□□□ -0.42
KLF3-201ENST00000261438 MUC7Q8TAX7 377 aa12.41□□□□□ -0.42
KLF3-201ENST00000261438 C9orf116Q5BN46 136 aaPredicted RBP12.4□□□□□ -0.42
KLF3-201ENST00000261438 IGKV4-1P06312 121 aa12.4□□□□□ -0.42
KLF3-201ENST00000261438 PSPHP1O15172 72 aa12.39□□□□□ -0.43
KLF3-201ENST00000261438 SEC61GP60059 68 aa12.39□□□□□ -0.43
KLF3-201ENST00000261438 C18orf65Q6ZTR6 163 aa12.39□□□□□ -0.43
KLF3-201ENST00000261438 UBE2AP49459 152 aa12.39□□□□□ -0.43
KLF3-201ENST00000261438 HIGD2AQ9BW72 106 aa12.39□□□□□ -0.43
KLF3-201ENST00000261438 TLN1Q9Y490 2541 aaKnown RBP12.39□□□□□ -0.43
KLF3-201ENST00000261438 IGKV2-28A0A075B6P5 120 aa12.38□□□□□ -0.43
KLF3-201ENST00000261438 IGKV2D-28P01615 120 aa12.38□□□□□ -0.43
KLF3-201ENST00000261438 ESRGQ1W209 222 aa12.38□□□□□ -0.43
KLF3-201ENST00000261438 SMCR5Q8TEV8 140 aa12.38□□□□□ -0.43
KLF3-201ENST00000261438 C19orf84I3L1E1 186 aa12.38□□□□□ -0.43
KLF3-201ENST00000261438 BEAN1Q3B7T3 259 aa12.38□□□□□ -0.43
KLF3-201ENST00000261438 CCDC168Q8NDH2 2452 aa12.38□□□□□ -0.43
KLF3-201ENST00000261438 DNAH12Q6ZR08 3092 aa12.38□□□□□ -0.43
KLF3-201ENST00000261438 CYSRT1A8MQ03 144 aa12.38□□□□□ -0.43
KLF3-201ENST00000261438 UNQ6190/PRO20217Q6UXQ8 127 aa12.37□□□□□ -0.43
KLF3-201ENST00000261438 ZNF702PQ9H963 129 aa12.37□□□□□ -0.43
KLF3-201ENST00000261438 FAM19A4Q96LR4 140 aa12.36□□□□□ -0.43
KLF3-201ENST00000261438 PCNTO95613 3336 aa12.36□□□□□ -0.43
KLF3-201ENST00000261438 BRI3O95415 125 aa12.36□□□□□ -0.43
KLF3-201ENST00000261438 LINC00575Q6W349 94 aa12.36□□□□□ -0.43
KLF3-201ENST00000261438 NANOS2P60321 138 aaKnown RBP12.35□□□□□ -0.43
KLF3-201ENST00000261438 OTOGLQ3ZCN5 2332 aa12.35□□□□□ -0.43
KLF3-201ENST00000261438 BCE1O60756 84 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms