RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 SMIM9A6NGZ8 99 aa9.96□□□□□ -0.82
ALPK3-201ENST00000258888 FAM19A1Q7Z5A9 133 aa9.96□□□□□ -0.82
ALPK3-201ENST00000258888 RNASE3P12724 160 aaKnown RBP9.95□□□□□ -0.82
ALPK3-201ENST00000258888 DEFB131BA0A096LNP1 70 aa9.95□□□□□ -0.82
ALPK3-201ENST00000258888 ATP5EP2Q5VTU8 51 aa9.95□□□□□ -0.82
ALPK3-201ENST00000258888 TRBV27A0A0K0K1C4 114 aa9.95□□□□□ -0.82
ALPK3-201ENST00000258888 FAM19A5Q7Z5A7 132 aaPredicted RBP9.95□□□□□ -0.82
ALPK3-201ENST00000258888 PRM2P04554 102 aa9.95□□□□□ -0.82
ALPK3-201ENST00000258888 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
ALPK3-201ENST00000258888 MRPS12O15235 138 aaKnown RBP9.95□□□□□ -0.82
ALPK3-201ENST00000258888 C11orf71Q6IPW1 123 aa9.95□□□□□ -0.82
ALPK3-201ENST00000258888 LINC00526Q96FQ7 95 aa9.94□□□□□ -0.82
ALPK3-201ENST00000258888 WFDC10AQ9H1F0 79 aa9.94□□□□□ -0.82
ALPK3-201ENST00000258888 A0A087WZ39 114 aa9.94□□□□□ -0.82
ALPK3-201ENST00000258888 LRCOL1A6NCL2 159 aa9.93□□□□□ -0.82
ALPK3-201ENST00000258888 C6orf99Q4VX62 202 aa9.92□□□□□ -0.82
ALPK3-201ENST00000258888 TRBV6-5A0A0K0K1A5 114 aa9.92□□□□□ -0.82
ALPK3-201ENST00000258888 BBC3Q96PG8 261 aaPredicted RBP9.92□□□□□ -0.82
ALPK3-201ENST00000258888 INAFM1C9JVW0 142 aa9.92□□□□□ -0.82
ALPK3-201ENST00000258888 LRRC75A-AS1Q8N1F1 130 aa9.92□□□□□ -0.82
ALPK3-201ENST00000258888 PCSK5Q92824 1860 aa9.92□□□□□ -0.82
ALPK3-201ENST00000258888 ANKRD17O75179 2603 aaKnown RBP9.92□□□□□ -0.82
ALPK3-201ENST00000258888 Q8N6K4 173 aa9.92□□□□□ -0.82
ALPK3-201ENST00000258888 USP17L23D6RBM5 183 aa9.91□□□□□ -0.82
ALPK3-201ENST00000258888 PLA2G2AP14555 144 aa9.91□□□□□ -0.82
ALPK3-201ENST00000258888 C18orf65Q6ZTR6 163 aa9.91□□□□□ -0.82
ALPK3-201ENST00000258888 C1orf158Q8N1D5 194 aa9.91□□□□□ -0.82
ALPK3-201ENST00000258888 C3orf84H3BNL1 204 aa9.91□□□□□ -0.82
ALPK3-201ENST00000258888 RBX1P62877 108 aa9.91□□□□□ -0.82
ALPK3-201ENST00000258888 LOC100131303A0A0U1RQF7 123 aa9.91□□□□□ -0.82
ALPK3-201ENST00000258888 TRBV6-4A0A1B0GX49 114 aa9.91□□□□□ -0.82
ALPK3-201ENST00000258888 WFDC10BQ8IUB3 73 aa9.9□□□□□ -0.82
ALPK3-201ENST00000258888 PYGO1Q9Y3Y4 419 aa9.9□□□□□ -0.82
ALPK3-201ENST00000258888 CCKP06307 115 aa9.9□□□□□ -0.82
ALPK3-201ENST00000258888 KLLNB2CW77 178 aa9.9□□□□□ -0.82
ALPK3-201ENST00000258888 CASC2Q6XLA1 102 aa9.9□□□□□ -0.82
ALPK3-201ENST00000258888 Q6ZS46 218 aa9.9□□□□□ -0.83
ALPK3-201ENST00000258888 ZNF702PQ9H963 129 aa9.9□□□□□ -0.83
ALPK3-201ENST00000258888 IGKV2-28A0A075B6P5 120 aa9.89□□□□□ -0.83
ALPK3-201ENST00000258888 IGKV2D-28P01615 120 aa9.89□□□□□ -0.83
ALPK3-201ENST00000258888 A0A0J9YWU9 116 aa9.89□□□□□ -0.83
ALPK3-201ENST00000258888 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.89□□□□□ -0.83
ALPK3-201ENST00000258888 HILS1P60008 231 aa9.89□□□□□ -0.83
ALPK3-201ENST00000258888 SYCNQ0VAF6 134 aa9.89□□□□□ -0.83
ALPK3-201ENST00000258888 MIFP14174 115 aa9.88□□□□□ -0.83
ALPK3-201ENST00000258888 C9orf85Q96MD7 179 aa9.88□□□□□ -0.83
ALPK3-201ENST00000258888 LINC00310P59036 64 aa9.87□□□□□ -0.83
ALPK3-201ENST00000258888 Q6ZQY7 126 aa9.87□□□□□ -0.83
ALPK3-201ENST00000258888 UBE2D4Q9Y2X8 147 aa9.87□□□□□ -0.83
ALPK3-201ENST00000258888 LST1O00453 97 aa9.87□□□□□ -0.83
ALPK3-201ENST00000258888 CD164L2Q6UWJ8 174 aa9.87□□□□□ -0.83
ALPK3-201ENST00000258888 POLR2KP53803 58 aaKnown RBP9.86□□□□□ -0.83
ALPK3-201ENST00000258888 PSPHP1O15172 72 aa9.85□□□□□ -0.83
ALPK3-201ENST00000258888 PSMG3-AS1Q96PY0 264 aa9.85□□□□□ -0.83
ALPK3-201ENST00000258888 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.85□□□□□ -0.83
ALPK3-201ENST00000258888 PRRC2CQ9Y520 2896 aaKnown RBP9.84□□□□□ -0.83
ALPK3-201ENST00000258888 UBE2D1P51668 147 aa9.84□□□□□ -0.83
ALPK3-201ENST00000258888 EPG5Q9HCE0 2579 aa9.84□□□□□ -0.83
ALPK3-201ENST00000258888 IGLV1-40P01703 118 aa9.84□□□□□ -0.83
ALPK3-201ENST00000258888 PPDPFQ9H3Y8 114 aa9.83□□□□□ -0.84
ALPK3-201ENST00000258888 SMIM11BQ8TCY0 68 aa9.83□□□□□ -0.84
ALPK3-201ENST00000258888 LINC00959A0A1B0GUT2 108 aa9.83□□□□□ -0.84
ALPK3-201ENST00000258888 MRPS36P82909 103 aaKnown RBP9.83□□□□□ -0.84
ALPK3-201ENST00000258888 KPRPQ5T749 579 aaPredicted RBP9.83□□□□□ -0.84
ALPK3-201ENST00000258888 CENPFP49454 3210 aa9.83□□□□□ -0.84
ALPK3-201ENST00000258888 CNFNQ9BYD5 112 aa9.83□□□□□ -0.84
ALPK3-201ENST00000258888 POM121L12Q8N7R1 296 aa9.82□□□□□ -0.84
ALPK3-201ENST00000258888 IL17DQ8TAD2 202 aa9.82□□□□□ -0.84
ALPK3-201ENST00000258888 XGP55808 180 aa9.82□□□□□ -0.84
ALPK3-201ENST00000258888 KIR2DL5BQ8NHK3 375 aa9.82□□□□□ -0.84
ALPK3-201ENST00000258888 EDN2P20800 178 aa9.82□□□□□ -0.84
ALPK3-201ENST00000258888 WFDC13Q8IUB5 93 aa9.82□□□□□ -0.84
ALPK3-201ENST00000258888 CDSNQ15517 529 aa9.82□□□□□ -0.84
ALPK3-201ENST00000258888 LINC01006Q8NI28 216 aa9.81□□□□□ -0.84
ALPK3-201ENST00000258888 SOSTDC1Q6X4U4 206 aa9.81□□□□□ -0.84
ALPK3-201ENST00000258888 SERP2Q8N6R1 65 aa9.81□□□□□ -0.84
ALPK3-201ENST00000258888 LY6G6DO95868 133 aa9.8□□□□□ -0.84
ALPK3-201ENST00000258888 RPL37AP8A6NKH3 93 aa9.8□□□□□ -0.84
ALPK3-201ENST00000258888 FAM19A3Q7Z5A8 133 aa9.8□□□□□ -0.84
ALPK3-201ENST00000258888 UBE2D3P61077 147 aa9.8□□□□□ -0.84
ALPK3-201ENST00000258888 UBE2D2P62837 147 aa9.8□□□□□ -0.84
ALPK3-201ENST00000258888 M0R378 163 aa9.8□□□□□ -0.84
ALPK3-201ENST00000258888 NDUFC1O43677 76 aa9.8□□□□□ -0.84
ALPK3-201ENST00000258888 ZNF843Q8N446 348 aa9.79□□□□□ -0.84
ALPK3-201ENST00000258888 ZNF73O43830 326 aaPredicted RBP9.79□□□□□ -0.84
ALPK3-201ENST00000258888 IGLV2-18A0A075B6J9 118 aa9.79□□□□□ -0.84
ALPK3-201ENST00000258888 IGHV4-30-4P0DP06 118 aa9.79□□□□□ -0.84
ALPK3-201ENST00000258888 DHRS4-AS1Q9P1J3 65 aa9.79□□□□□ -0.84
ALPK3-201ENST00000258888 TRAV10A0A0B4J240 114 aa9.79□□□□□ -0.84
ALPK3-201ENST00000258888 LELP1Q5T871 98 aa9.79□□□□□ -0.84
ALPK3-201ENST00000258888 IGIPA6NJ69 53 aa9.79□□□□□ -0.84
ALPK3-201ENST00000258888 SPINK6Q6UWN8 80 aa9.78□□□□□ -0.84
ALPK3-201ENST00000258888 URB1-AS1Q96HZ7 61 aa9.78□□□□□ -0.84
ALPK3-201ENST00000258888 SERP1Q9Y6X1 66 aa9.78□□□□□ -0.84
ALPK3-201ENST00000258888 PRO3102Q9H379 93 aa9.77□□□□□ -0.85
ALPK3-201ENST00000258888 CDC42SE2Q9NRR3 84 aa9.76□□□□□ -0.85
ALPK3-201ENST00000258888 AVPP01185 164 aa9.76□□□□□ -0.85
ALPK3-201ENST00000258888 SHISA2Q6UWI4 295 aa9.76□□□□□ -0.85
ALPK3-201ENST00000258888 LINC00242Q5T6M2 205 aa9.76□□□□□ -0.85
ALPK3-201ENST00000258888 CRIP2P52943 208 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms