RNA–Protein interactions for RNA: ENST00000257818.2

LMO2-201, Transcript of LIM domain only 2, humanhuman

TSL 1 (best) BASIC

Gene LMO2, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-201ENST00000257818 GAGE12GP0CL81 117 aa17.65■□□□□ 0.42
LMO2-201ENST00000257818 GAGE12IP0CL82 117 aa17.65■□□□□ 0.42
LMO2-201ENST00000257818 GAGE4Q13068 117 aa17.65■□□□□ 0.42
LMO2-201ENST00000257818 SMIM1B2RUZ4 78 aa17.64■□□□□ 0.41
LMO2-201ENST00000257818 DYNLRB2Q8TF09 96 aa17.64■□□□□ 0.41
LMO2-201ENST00000257818 SVIPQ8NHG7 77 aa17.64■□□□□ 0.41
LMO2-201ENST00000257818 FAM19A3Q7Z5A8 133 aa17.63■□□□□ 0.41
LMO2-201ENST00000257818 COX7A2LO14548 114 aa17.62■□□□□ 0.41
LMO2-201ENST00000257818 XCL2Q9UBD3 114 aa17.62■□□□□ 0.41
LMO2-201ENST00000257818 NOTCH2Q04721 2471 aa17.62■□□□□ 0.41
LMO2-201ENST00000257818 DEFB114Q30KQ6 69 aa17.61■□□□□ 0.41
LMO2-201ENST00000257818 SHISA2Q6UWI4 295 aa17.61■□□□□ 0.41
LMO2-201ENST00000257818 CCL24O00175 119 aa17.6■□□□□ 0.41
LMO2-201ENST00000257818 TRAV13-1A0A0B4J241 112 aa17.6■□□□□ 0.41
LMO2-201ENST00000257818 NTM-AS1Q6ZSK4 140 aa17.6■□□□□ 0.41
LMO2-201ENST00000257818 C16orf95Q9H693 158 aa17.6■□□□□ 0.41
LMO2-201ENST00000257818 HIVEP2P31629 2446 aa17.59■□□□□ 0.41
LMO2-201ENST00000257818 HILS1P60008 231 aa17.59■□□□□ 0.41
LMO2-201ENST00000257818 IL17DQ8TAD2 202 aa17.58■□□□□ 0.4
LMO2-201ENST00000257818 TRGV1A0A0A0MS02 117 aa17.58■□□□□ 0.4
LMO2-201ENST00000257818 C1orf158Q8N1D5 194 aa17.58■□□□□ 0.4
LMO2-201ENST00000257818 F5H768 121 aa17.57■□□□□ 0.4
LMO2-201ENST00000257818 PRIMA1Q86XR5 153 aa17.57■□□□□ 0.4
LMO2-201ENST00000257818 CSDC2Q9Y534 153 aaKnown RBP17.57■□□□□ 0.4
LMO2-201ENST00000257818 LY6G6DO95868 133 aa17.56■□□□□ 0.4
LMO2-201ENST00000257818 TRBV7-7A0A0K0K1E9 115 aa17.56■□□□□ 0.4
LMO2-201ENST00000257818 ODF3L2Q3SX64 289 aa17.55■□□□□ 0.4
LMO2-201ENST00000257818 MEIG1Q5JSS6 88 aa17.55■□□□□ 0.4
LMO2-201ENST00000257818 CDC42SE2Q9NRR3 84 aa17.54■□□□□ 0.4
LMO2-201ENST00000257818 OTOGQ6ZRI0 2925 aa17.54■□□□□ 0.4
LMO2-201ENST00000257818 K7EQD1 137 aa17.53■□□□□ 0.4
LMO2-201ENST00000257818 RPL36AP83881 106 aaKnown RBP17.53■□□□□ 0.4
LMO2-201ENST00000257818 COPS9Q8WXC6 57 aa17.53■□□□□ 0.4
LMO2-201ENST00000257818 RPL36ALQ969Q0 106 aaKnown RBP17.53■□□□□ 0.4
LMO2-201ENST00000257818 Q6ZTI0 123 aa17.52■□□□□ 0.4
LMO2-201ENST00000257818 FAM218AQ96MZ4 157 aa17.51■□□□□ 0.39
LMO2-201ENST00000257818 DAZ2Q13117 558 aaKnown RBP17.51■□□□□ 0.39
LMO2-201ENST00000257818 DAZ4Q86SG3 579 aaKnown RBP17.51■□□□□ 0.39
LMO2-201ENST00000257818 CHCHD5Q9BSY4 110 aa17.51■□□□□ 0.39
LMO2-201ENST00000257818 DAZ3Q9NR90 486 aaKnown RBP17.51■□□□□ 0.39
LMO2-201ENST00000257818 C22orf24Q9Y442 160 aa17.51■□□□□ 0.39
LMO2-201ENST00000257818 TRBV10-1A0A0K0K1A3 114 aa17.5■□□□□ 0.39
LMO2-201ENST00000257818 SMCR5Q8TEV8 140 aa17.5■□□□□ 0.39
LMO2-201ENST00000257818 SETXQ7Z333 2677 aaKnown RBP17.5■□□□□ 0.39
LMO2-201ENST00000257818 TRACP01848 142 aa17.49■□□□□ 0.39
LMO2-201ENST00000257818 ACYP1P07311 99 aa17.49■□□□□ 0.39
LMO2-201ENST00000257818 STHQ8IWL8 128 aa17.49■□□□□ 0.39
LMO2-201ENST00000257818 NIPBLQ6KC79 2804 aaeCLIP17.49■□□□□ 0.39
LMO2-201ENST00000257818 HERV-K104P63124 156 aa17.49■□□□□ 0.39
LMO2-201ENST00000257818 BAALC-AS2P0C853 105 aa17.47■□□□□ 0.39
LMO2-201ENST00000257818 TRAV25A0A0B4J276 109 aa17.45■□□□□ 0.38
LMO2-201ENST00000257818 PPDPFQ9H3Y8 114 aa17.44■□□□□ 0.38
LMO2-201ENST00000257818 INAFM1C9JVW0 142 aa17.42■□□□□ 0.38
LMO2-201ENST00000257818 C2CD3Q4AC94 2353 aa17.41■□□□□ 0.38
LMO2-201ENST00000257818 SDIM1Q6ZPB5 146 aa17.41■□□□□ 0.38
LMO2-201ENST00000257818 TMEM243Q9BU79 118 aa17.41■□□□□ 0.38
LMO2-201ENST00000257818 IMUPQ9GZP8 106 aa17.41■□□□□ 0.38
LMO2-201ENST00000257818 NOP10Q9NPE3 64 aaKnown RBP17.41■□□□□ 0.38
LMO2-201ENST00000257818 FAM236AA0A1B0GUQ0 79 aa17.41■□□□□ 0.38
LMO2-201ENST00000257818 FAM236BA0A1B0GV22 79 aa17.41■□□□□ 0.38
LMO2-201ENST00000257818 KRTAP10-3P60369 221 aa17.4■□□□□ 0.38
LMO2-201ENST00000257818 UBE2L6O14933 153 aa17.4■□□□□ 0.38
LMO2-201ENST00000257818 LINC00337Q8N6G1 96 aa17.4■□□□□ 0.38
LMO2-201ENST00000257818 Q9HAA7 133 aa17.4■□□□□ 0.38
LMO2-201ENST00000257818 RPL28P46779 137 aaKnown RBP17.39■□□□□ 0.37
LMO2-201ENST00000257818 FAM222AQ5U5X8 452 aa17.39■□□□□ 0.37
LMO2-201ENST00000257818 LINC00643Q86TS7 51 aa17.39■□□□□ 0.37
LMO2-201ENST00000257818 IGKV2-28A0A075B6P5 120 aa17.38■□□□□ 0.37
LMO2-201ENST00000257818 LOC100131303A0A0U1RQF7 123 aa17.38■□□□□ 0.37
LMO2-201ENST00000257818 IGKV2D-28P01615 120 aa17.38■□□□□ 0.37
LMO2-201ENST00000257818 MIR7-3HGQ8N6C7 128 aa17.38■□□□□ 0.37
LMO2-201ENST00000257818 TRAV13-2A0A0B4J235 113 aa17.37■□□□□ 0.37
LMO2-201ENST00000257818 COX7B2Q8TF08 81 aa17.37■□□□□ 0.37
LMO2-201ENST00000257818 CRPP02741 224 aa17.36■□□□□ 0.37
LMO2-201ENST00000257818 PF4P02776 101 aa17.36■□□□□ 0.37
LMO2-201ENST00000257818 GIG44P09565 113 aaPredicted RBP17.36■□□□□ 0.37
LMO2-201ENST00000257818 NOTCH3Q9UM47 2321 aa17.36■□□□□ 0.37
LMO2-201ENST00000257818 PLAC8L1A1L4L8 177 aa17.35■□□□□ 0.37
LMO2-201ENST00000257818 SND1-IT1Q9HBX3 110 aa17.35■□□□□ 0.37
LMO2-201ENST00000257818 NSD1Q96L73 2696 aaPredicted RBP17.34■□□□□ 0.37
LMO2-201ENST00000257818 MALP21145 153 aa17.34■□□□□ 0.37
LMO2-201ENST00000257818 JMJD1CQ15652 2540 aa17.34■□□□□ 0.37
LMO2-201ENST00000257818 TOMM7Q9P0U1 55 aa17.33■□□□□ 0.37
LMO2-201ENST00000257818 HIVEP1P15822 2718 aa17.33■□□□□ 0.36
LMO2-201ENST00000257818 IGLV1-51P01701 117 aa17.32■□□□□ 0.36
LMO2-201ENST00000257818 C3orf56Q8N813 242 aa17.32■□□□□ 0.36
LMO2-201ENST00000257818 IGKV3OR2-268A0A0C4DH90 116 aa17.32■□□□□ 0.36
LMO2-201ENST00000257818 WFDC10AQ9H1F0 79 aa17.32■□□□□ 0.36
LMO2-201ENST00000257818 FN1P02751 2386 aaKnown RBP17.31■□□□□ 0.36
LMO2-201ENST00000257818 SMIM20Q8N5G0 67 aa17.31■□□□□ 0.36
LMO2-201ENST00000257818 A0A087WYN8 130 aa17.31■□□□□ 0.36
LMO2-201ENST00000257818 INAFM2P0DMQ5 153 aa17.31■□□□□ 0.36
LMO2-201ENST00000257818 GAGE2AQ6NT46 116 aa17.31■□□□□ 0.36
LMO2-201ENST00000257818 SMIM11BQ8TCY0 68 aa17.31■□□□□ 0.36
LMO2-201ENST00000257818 IGLV4-60A0A075B6I1 120 aa17.3■□□□□ 0.36
LMO2-201ENST00000257818 TRGV2A0A075B6R0 118 aa17.3■□□□□ 0.36
LMO2-201ENST00000257818 CCL18P55774 89 aa17.28■□□□□ 0.36
LMO2-201ENST00000257818 LINC00158P58513 81 aa17.28■□□□□ 0.36
LMO2-201ENST00000257818 C9orf129Q5T035 196 aaKnown RBP17.28■□□□□ 0.36
LMO2-201ENST00000257818 TRBV6-4A0A1B0GX49 114 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms