RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 RHODO00212 210 aa10.47□□□□□ -0.73
TRAFD1-201ENST00000257604 RPL36AP83881 106 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-201ENST00000257604 RPL36ALQ969Q0 106 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-201ENST00000257604 SBSPONQ8IVN8 264 aa10.47□□□□□ -0.73
TRAFD1-201ENST00000257604 FAM110AQ9BQ89 295 aa10.47□□□□□ -0.73
TRAFD1-201ENST00000257604 SNCGO76070 127 aa10.47□□□□□ -0.73
TRAFD1-201ENST00000257604 RHOHQ15669 191 aa10.47□□□□□ -0.73
TRAFD1-201ENST00000257604 ADAMTSL4-AS1Q5T5F5 129 aa10.47□□□□□ -0.73
TRAFD1-201ENST00000257604 MGAM2Q2M2H8 2515 aa10.46□□□□□ -0.74
TRAFD1-201ENST00000257604 LEPROTO15243 131 aa10.46□□□□□ -0.74
TRAFD1-201ENST00000257604 TRIAP1O43715 76 aa10.46□□□□□ -0.74
TRAFD1-201ENST00000257604 A0A0J9YXY3 114 aa10.45□□□□□ -0.74
TRAFD1-201ENST00000257604 GAGE2BQ13066 116 aa10.45□□□□□ -0.74
TRAFD1-201ENST00000257604 LINC01620Q4KN68 170 aa10.45□□□□□ -0.74
TRAFD1-201ENST00000257604 GAGE2EQ4V326 116 aa10.45□□□□□ -0.74
TRAFD1-201ENST00000257604 MEIG1Q5JSS6 88 aa10.45□□□□□ -0.74
TRAFD1-201ENST00000257604 C19orf73Q9NVV2 129 aa10.45□□□□□ -0.74
TRAFD1-201ENST00000257604 GAGE2DQ9UEU5 116 aa10.45□□□□□ -0.74
TRAFD1-201ENST00000257604 UBE2L6O14933 153 aa10.45□□□□□ -0.74
TRAFD1-201ENST00000257604 RS1O15537 224 aa10.45□□□□□ -0.74
TRAFD1-201ENST00000257604 IGHV3-30-3P0DP02 117 aa10.45□□□□□ -0.74
TRAFD1-201ENST00000257604 CHCHD7Q9BUK0 85 aa10.44□□□□□ -0.74
TRAFD1-201ENST00000257604 LOC107984640A0A0U1RRK4 108 aa10.44□□□□□ -0.74
TRAFD1-201ENST00000257604 K7EQD1 137 aa10.44□□□□□ -0.74
TRAFD1-201ENST00000257604 CLPSL2Q6UWE3 100 aa10.44□□□□□ -0.74
TRAFD1-201ENST00000257604 TMEM262E9PQX1 116 aa10.43□□□□□ -0.74
TRAFD1-201ENST00000257604 C15orf53Q8NAA6 179 aa10.43□□□□□ -0.74
TRAFD1-201ENST00000257604 A8MTW9 85 aa10.43□□□□□ -0.74
TRAFD1-201ENST00000257604 NHLRC4P0CG21 123 aaPredicted RBP10.43□□□□□ -0.74
TRAFD1-201ENST00000257604 C2orf82Q6UX34 121 aa10.43□□□□□ -0.74
TRAFD1-201ENST00000257604 CHCHD5Q9BSY4 110 aa10.43□□□□□ -0.74
TRAFD1-201ENST00000257604 ATXN8Q156A1 80 aa10.42□□□□□ -0.74
TRAFD1-201ENST00000257604 TIMM21Q9BVV7 248 aa10.42□□□□□ -0.74
TRAFD1-201ENST00000257604 BEAN1Q3B7T3 259 aa10.42□□□□□ -0.74
TRAFD1-201ENST00000257604 UBE2D4Q9Y2X8 147 aa10.42□□□□□ -0.74
TRAFD1-201ENST00000257604 TRAV8-4A0A0B4J246 113 aa10.41□□□□□ -0.74
TRAFD1-201ENST00000257604 OXLD1Q5BKU9 147 aa10.41□□□□□ -0.74
TRAFD1-201ENST00000257604 CDKN2A-AS1Q9UH64 79 aa10.41□□□□□ -0.74
TRAFD1-201ENST00000257604 TOMM7Q9P0U1 55 aa10.41□□□□□ -0.74
TRAFD1-201ENST00000257604 C16orf74Q96GX8 76 aa10.4□□□□□ -0.74
TRAFD1-201ENST00000257604 A0A0B4J2C4 111 aa10.4□□□□□ -0.74
TRAFD1-201ENST00000257604 NTM-AS1Q6ZSK4 140 aa10.4□□□□□ -0.74
TRAFD1-201ENST00000257604 C11orf68Q9H3H3 251 aaKnown RBP10.4□□□□□ -0.74
TRAFD1-201ENST00000257604 NDUFA12Q9UI09 145 aa10.4□□□□□ -0.74
TRAFD1-201ENST00000257604 NDUFV3P56181 108 aaKnown RBP10.39□□□□□ -0.75
TRAFD1-201ENST00000257604 COX6A2Q02221 97 aa10.39□□□□□ -0.75
TRAFD1-201ENST00000257604 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.39□□□□□ -0.75
TRAFD1-201ENST00000257604 ICOSQ9Y6W8 199 aa10.38□□□□□ -0.75
TRAFD1-201ENST00000257604 PLAC8L1A1L4L8 177 aa10.38□□□□□ -0.75
TRAFD1-201ENST00000257604 UBE2WQ96B02 151 aa10.38□□□□□ -0.75
TRAFD1-201ENST00000257604 LITAFQ99732 161 aa10.38□□□□□ -0.75
TRAFD1-201ENST00000257604 H7C423 109 aa10.37□□□□□ -0.75
TRAFD1-201ENST00000257604 FAM222AQ5U5X8 452 aa10.37□□□□□ -0.75
TRAFD1-201ENST00000257604 FAM104AQ969W3 186 aa10.37□□□□□ -0.75
TRAFD1-201ENST00000257604 GYPEP15421 78 aa10.37□□□□□ -0.75
TRAFD1-201ENST00000257604 CMC4P56277 68 aaPredicted RBP10.37□□□□□ -0.75
TRAFD1-201ENST00000257604 CSNK1G2-AS1Q8NCQ2 148 aa10.37□□□□□ -0.75
TRAFD1-201ENST00000257604 TRBV10-2A0A0K0K1G8 114 aa10.36□□□□□ -0.75
TRAFD1-201ENST00000257604 RPL13AP40429 203 aaKnown RBP10.36□□□□□ -0.75
TRAFD1-201ENST00000257604 C9orf66Q5T8R8 295 aa10.36□□□□□ -0.75
TRAFD1-201ENST00000257604 IFITM1P13164 125 aa10.35□□□□□ -0.75
TRAFD1-201ENST00000257604 PRB2P02812 416 aaPredicted RBP10.35□□□□□ -0.75
TRAFD1-201ENST00000257604 TMEM243Q9BU79 118 aa10.34□□□□□ -0.75
TRAFD1-201ENST00000257604 TENM3Q9P273 2699 aa10.34□□□□□ -0.75
TRAFD1-201ENST00000257604 TRBV30A0A0K0K1B3 111 aa10.34□□□□□ -0.75
TRAFD1-201ENST00000257604 DNAJC30Q96LL9 226 aa10.34□□□□□ -0.75
TRAFD1-201ENST00000257604 SPANXA1Q9NS26 97 aa10.34□□□□□ -0.75
TRAFD1-201ENST00000257604 IGHV1-58A0A0C4DH39 117 aa10.34□□□□□ -0.75
TRAFD1-201ENST00000257604 TMEM101Q96IK0 257 aa10.34□□□□□ -0.75
TRAFD1-201ENST00000257604 DAZ2Q13117 558 aaKnown RBP10.33□□□□□ -0.76
TRAFD1-201ENST00000257604 KLK5Q9Y337 293 aaPredicted RBP10.33□□□□□ -0.76
TRAFD1-201ENST00000257604 F5H768 121 aa10.32□□□□□ -0.76
TRAFD1-201ENST00000257604 FHL2Q14192 279 aa10.32□□□□□ -0.76
TRAFD1-201ENST00000257604 IGLV4-60A0A075B6I1 120 aa10.32□□□□□ -0.76
TRAFD1-201ENST00000257604 COX6CP09669 75 aa10.32□□□□□ -0.76
TRAFD1-201ENST00000257604 MRPS36P82909 103 aaKnown RBP10.32□□□□□ -0.76
TRAFD1-201ENST00000257604 C5orf38Q86SI9 138 aa10.32□□□□□ -0.76
TRAFD1-201ENST00000257604 RETNQ9HD89 108 aa10.32□□□□□ -0.76
TRAFD1-201ENST00000257604 VSIG2Q96IQ7 327 aa10.32□□□□□ -0.76
TRAFD1-201ENST00000257604 IGLV10-54A0A075B6I4 117 aa10.31□□□□□ -0.76
TRAFD1-201ENST00000257604 DAZ4Q86SG3 579 aaKnown RBP10.31□□□□□ -0.76
TRAFD1-201ENST00000257604 DAZ3Q9NR90 486 aaKnown RBP10.31□□□□□ -0.76
TRAFD1-201ENST00000257604 PYGO1Q9Y3Y4 419 aa10.31□□□□□ -0.76
TRAFD1-201ENST00000257604 Q8N3U1 123 aa10.31□□□□□ -0.76
TRAFD1-201ENST00000257604 Q9H8V8 135 aa10.31□□□□□ -0.76
TRAFD1-201ENST00000257604 MIAQ16674 131 aa10.3□□□□□ -0.76
TRAFD1-201ENST00000257604 LINC00242Q5T6M2 205 aa10.3□□□□□ -0.76
TRAFD1-201ENST00000257604 DAD1P61803 113 aa10.3□□□□□ -0.76
TRAFD1-201ENST00000257604 IL17DQ8TAD2 202 aa10.3□□□□□ -0.76
TRAFD1-201ENST00000257604 IGHV4-28A0A0C4DH34 117 aa10.29□□□□□ -0.76
TRAFD1-201ENST00000257604 PAX4O43316 350 aa10.29□□□□□ -0.76
TRAFD1-201ENST00000257604 XCL1P47992 114 aa10.29□□□□□ -0.76
TRAFD1-201ENST00000257604 EDA2RQ9HAV5 297 aa10.29□□□□□ -0.76
TRAFD1-201ENST00000257604 X6R8D5 127 aa10.29□□□□□ -0.76
TRAFD1-201ENST00000257604 TRBV10-1A0A0K0K1A3 114 aa10.29□□□□□ -0.76
TRAFD1-201ENST00000257604 IGHV4-30-4P0DP06 118 aa10.29□□□□□ -0.76
TRAFD1-201ENST00000257604 PRIMA1Q86XR5 153 aa10.29□□□□□ -0.76
TRAFD1-201ENST00000257604 CELA1Q9UNI1 258 aa10.29□□□□□ -0.76
TRAFD1-201ENST00000257604 CSDC2Q9Y534 153 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-201ENST00000257604 Q9HAA7 133 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms