RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 C12orf74Q32Q52 190 aa16.19■□□□□ 0.18
SYNGR3-201ENST00000248121 CCL25O15444 150 aa16.18■□□□□ 0.18
SYNGR3-201ENST00000248121 HTN3P15516 51 aa16.18■□□□□ 0.18
SYNGR3-201ENST00000248121 UBE2V1Q13404 147 aa16.18■□□□□ 0.18
SYNGR3-201ENST00000248121 H3BUT2 72 aa16.18■□□□□ 0.18
SYNGR3-201ENST00000248121 TM2D3Q9BRN9 247 aa16.18■□□□□ 0.18
SYNGR3-201ENST00000248121 TRAV26-1A0A087WT03 109 aa16.17■□□□□ 0.18
SYNGR3-201ENST00000248121 A0A0J9YXY3 114 aa16.17■□□□□ 0.18
SYNGR3-201ENST00000248121 IGHV3-30P01768 117 aa16.17■□□□□ 0.18
SYNGR3-201ENST00000248121 IGHV3-30-5P0DP03 117 aa16.17■□□□□ 0.18
SYNGR3-201ENST00000248121 A0A1B0GWB2 263 aa16.17■□□□□ 0.18
SYNGR3-201ENST00000248121 IGLV5-39A0A0G2JS06 123 aa16.16■□□□□ 0.18
SYNGR3-201ENST00000248121 C11orf68Q9H3H3 251 aaKnown RBP16.16■□□□□ 0.18
SYNGR3-201ENST00000248121 NDUFA12Q9UI09 145 aa16.16■□□□□ 0.18
SYNGR3-201ENST00000248121 F5H768 121 aa16.15■□□□□ 0.18
SYNGR3-201ENST00000248121 ZFAND6Q6FIF0 208 aa16.15■□□□□ 0.18
SYNGR3-201ENST00000248121 SMIM1B2RUZ4 78 aa16.14■□□□□ 0.17
SYNGR3-201ENST00000248121 SPATA25Q9BR10 227 aa16.14■□□□□ 0.17
SYNGR3-201ENST00000248121 COL7A1Q02388 2944 aa16.13■□□□□ 0.17
SYNGR3-201ENST00000248121 Q6ZTC4 211 aa16.13■□□□□ 0.17
SYNGR3-201ENST00000248121 LITAFQ99732 161 aa16.13■□□□□ 0.17
SYNGR3-201ENST00000248121 DNAH9Q9NYC9 4486 aa16.12■□□□□ 0.17
SYNGR3-201ENST00000248121 IGKV3OR2-268A0A0C4DH90 116 aa16.11■□□□□ 0.17
SYNGR3-201ENST00000248121 NANOS2P60321 138 aaKnown RBP16.1■□□□□ 0.17
SYNGR3-201ENST00000248121 A0A1B0GUV1 79 aa16.1■□□□□ 0.17
SYNGR3-201ENST00000248121 A0A1W2PPM0 123 aa16.1■□□□□ 0.17
SYNGR3-201ENST00000248121 RBX1P62877 108 aa16.1■□□□□ 0.17
SYNGR3-201ENST00000248121 IGLL5B9A064 214 aa16.09■□□□□ 0.17
SYNGR3-201ENST00000248121 TMEM262E9PQX1 116 aa16.09■□□□□ 0.17
SYNGR3-201ENST00000248121 TEX48A0A1B0GUV7 120 aa16.08■□□□□ 0.16
SYNGR3-201ENST00000248121 TMEM238LA0A1B0GVL6 79 aa16.08■□□□□ 0.16
SYNGR3-201ENST00000248121 A6NJY4 79 aa16.08■□□□□ 0.16
SYNGR3-201ENST00000248121 TMEM238C9JI98 176 aa16.08■□□□□ 0.16
SYNGR3-201ENST00000248121 ADAMTSL4-AS1Q5T5F5 129 aa16.08■□□□□ 0.16
SYNGR3-201ENST00000248121 NDUFA1O15239 70 aa16.07■□□□□ 0.16
SYNGR3-201ENST00000248121 MRPL23Q16540 153 aaKnown RBP16.06■□□□□ 0.16
SYNGR3-201ENST00000248121 MUSTN1Q8IVN3 82 aa16.06■□□□□ 0.16
SYNGR3-201ENST00000248121 IGHV3OR16-9A0A0B4J2B5 98 aa16.05■□□□□ 0.16
SYNGR3-201ENST00000248121 LINC00959A0A1B0GUT2 108 aa16.05■□□□□ 0.16
SYNGR3-201ENST00000248121 KRTAP21-3Q3LHN1 58 aa16.05■□□□□ 0.16
SYNGR3-201ENST00000248121 Q8N3U1 123 aa16.05■□□□□ 0.16
SYNGR3-201ENST00000248121 C11orf45Q8TAV5 145 aa16.04■□□□□ 0.16
SYNGR3-201ENST00000248121 CFC1BP0CG36 223 aa16.04■□□□□ 0.16
SYNGR3-201ENST00000248121 CFC1P0CG37 223 aa16.04■□□□□ 0.16
SYNGR3-201ENST00000248121 ICOSQ9Y6W8 199 aa16.04■□□□□ 0.16
SYNGR3-201ENST00000248121 GAGE10A6NGK3 116 aa16.03■□□□□ 0.16
SYNGR3-201ENST00000248121 EIF4EBP3O60516 100 aaPredicted RBP16.03■□□□□ 0.16
SYNGR3-201ENST00000248121 APOMO95445 188 aa16.03■□□□□ 0.16
SYNGR3-201ENST00000248121 Q9H8V8 135 aa16.03■□□□□ 0.16
SYNGR3-201ENST00000248121 A4D1N5 150 aa16.03■□□□□ 0.16
SYNGR3-201ENST00000248121 K7EP34 96 aa16.03■□□□□ 0.16
SYNGR3-201ENST00000248121 ZNF625Q96I27 306 aaPredicted RBP16.02■□□□□ 0.15
SYNGR3-201ENST00000248121 SPANXDQ9BXN6 97 aa16.02■□□□□ 0.15
SYNGR3-201ENST00000248121 SPANXCQ9NY87 97 aa16.02■□□□□ 0.15
SYNGR3-201ENST00000248121 PRKDCP78527 4128 aaKnown RBP16.02■□□□□ 0.15
SYNGR3-201ENST00000248121 FABP2P12104 132 aa16.01■□□□□ 0.15
SYNGR3-201ENST00000248121 SPCS1Q9Y6A9 102 aa16.01■□□□□ 0.15
SYNGR3-201ENST00000248121 CLPSL2Q6UWE3 100 aa16■□□□□ 0.15
SYNGR3-201ENST00000248121 PGPEP1Q9NXJ5 209 aa16■□□□□ 0.15
SYNGR3-201ENST00000248121 TIMM17BO60830 172 aa15.99■□□□□ 0.15
SYNGR3-201ENST00000248121 MIAQ16674 131 aa15.99■□□□□ 0.15
SYNGR3-201ENST00000248121 MEGF8Q7Z7M0 2845 aa15.99■□□□□ 0.15
SYNGR3-201ENST00000248121 A0A087WZ39 114 aa15.98■□□□□ 0.15
SYNGR3-201ENST00000248121 RPL24P83731 157 aaKnown RBP15.98■□□□□ 0.15
SYNGR3-201ENST00000248121 SH2D6Q7Z4S9 175 aa15.98■□□□□ 0.15
SYNGR3-201ENST00000248121 B9D2Q9BPU9 175 aa15.98■□□□□ 0.15
SYNGR3-201ENST00000248121 LELP1Q5T871 98 aa15.98■□□□□ 0.15
SYNGR3-201ENST00000248121 GTF2H5Q6ZYL4 71 aa15.98■□□□□ 0.15
SYNGR3-201ENST00000248121 TSPAN13O95857 204 aa15.97■□□□□ 0.15
SYNGR3-201ENST00000248121 PRSS2P07478 247 aa15.97■□□□□ 0.15
SYNGR3-201ENST00000248121 C5orf38Q86SI9 138 aa15.97■□□□□ 0.15
SYNGR3-201ENST00000248121 LINC00269Q8N2A0 174 aa15.97■□□□□ 0.15
SYNGR3-201ENST00000248121 DAND5Q8N907 189 aa15.96■□□□□ 0.15
SYNGR3-201ENST00000248121 DEFB131BA0A096LNP1 70 aa15.96■□□□□ 0.15
SYNGR3-201ENST00000248121 STAB2Q8WWQ8 2551 aa15.95■□□□□ 0.14
SYNGR3-201ENST00000248121 XCL1P47992 114 aa15.95■□□□□ 0.14
SYNGR3-201ENST00000248121 COX7B2Q8TF08 81 aa15.95■□□□□ 0.14
SYNGR3-201ENST00000248121 NPC2P61916 151 aa15.95■□□□□ 0.14
SYNGR3-201ENST00000248121 SS18Q15532 418 aa15.95■□□□□ 0.14
SYNGR3-201ENST00000248121 LYPD5Q6UWN5 251 aa15.94■□□□□ 0.14
SYNGR3-201ENST00000248121 ANGP03950 147 aaKnown RBP15.93■□□□□ 0.14
SYNGR3-201ENST00000248121 H3BNG1 76 aa15.93■□□□□ 0.14
SYNGR3-201ENST00000248121 PRO1854Q9UHT4 67 aa15.93■□□□□ 0.14
SYNGR3-201ENST00000248121 A0A0B4J2C4 111 aa15.92■□□□□ 0.14
SYNGR3-201ENST00000248121 TOMM7Q9P0U1 55 aa15.91■□□□□ 0.14
SYNGR3-201ENST00000248121 A0A0U1RRA0 63 aa15.91■□□□□ 0.14
SYNGR3-201ENST00000248121 REG3AQ06141 175 aa15.91■□□□□ 0.14
SYNGR3-201ENST00000248121 HERV-K104P63124 156 aa15.9■□□□□ 0.14
SYNGR3-201ENST00000248121 CIRBPQ14011 172 aaKnown RBP15.9■□□□□ 0.14
SYNGR3-201ENST00000248121 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.89■□□□□ 0.13
SYNGR3-201ENST00000248121 SFTA2Q6UW10 78 aa15.89■□□□□ 0.13
SYNGR3-201ENST00000248121 IFITM1P13164 125 aa15.88■□□□□ 0.13
SYNGR3-201ENST00000248121 IGHV3-33P01772 117 aa15.88■□□□□ 0.13
SYNGR3-201ENST00000248121 MEIG1Q5JSS6 88 aa15.87■□□□□ 0.13
SYNGR3-201ENST00000248121 LINC00308Q8TCZ7 52 aa15.87■□□□□ 0.13
SYNGR3-201ENST00000248121 CHCHD10Q8WYQ3 142 aaPredicted RBP15.87■□□□□ 0.13
SYNGR3-201ENST00000248121 IGLV10-54A0A075B6I4 117 aa15.87■□□□□ 0.13
SYNGR3-201ENST00000248121 SOSTDC1Q6X4U4 206 aa15.87■□□□□ 0.13
SYNGR3-201ENST00000248121 CD164L2Q6UWJ8 174 aa15.86■□□□□ 0.13
SYNGR3-201ENST00000248121 TRAV10A0A0B4J240 114 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms