RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 FAM19A1Q7Z5A9 133 aa14.39□□□□□ -0.11
SOX4-201ENST00000244745 KLK5Q9Y337 293 aaPredicted RBP14.39□□□□□ -0.11
SOX4-201ENST00000244745 C1orf158Q8N1D5 194 aa14.39□□□□□ -0.11
SOX4-201ENST00000244745 ANKHD1Q8IWZ3 2542 aaKnown RBP14.38□□□□□ -0.11
SOX4-201ENST00000244745 INAFM1C9JVW0 142 aa14.38□□□□□ -0.11
SOX4-201ENST00000244745 SERP1Q9Y6X1 66 aa14.38□□□□□ -0.11
SOX4-201ENST00000244745 A0A087WYN8 130 aa14.37□□□□□ -0.11
SOX4-201ENST00000244745 ARHGAP32A7KAX9 2087 aa14.37□□□□□ -0.11
SOX4-201ENST00000244745 IGKV2-28A0A075B6P5 120 aa14.37□□□□□ -0.11
SOX4-201ENST00000244745 SMIM26A0A096LP01 95 aa14.37□□□□□ -0.11
SOX4-201ENST00000244745 IGKV2D-28P01615 120 aa14.37□□□□□ -0.11
SOX4-201ENST00000244745 LINC01006Q8NI28 216 aa14.36□□□□□ -0.11
SOX4-201ENST00000244745 A0A096LNI7 61 aa14.36□□□□□ -0.11
SOX4-201ENST00000244745 SMIM1B2RUZ4 78 aa14.35□□□□□ -0.11
SOX4-201ENST00000244745 LOC107984640A0A0U1RRK4 108 aa14.35□□□□□ -0.11
SOX4-201ENST00000244745 FAM30AQ9NZY2 134 aa14.35□□□□□ -0.11
SOX4-201ENST00000244745 TRAV7A0A075B6U4 112 aa14.34□□□□□ -0.11
SOX4-201ENST00000244745 ATRXP46100 2492 aa14.34□□□□□ -0.11
SOX4-201ENST00000244745 PRR4Q16378 134 aa14.34□□□□□ -0.11
SOX4-201ENST00000244745 SYCNQ0VAF6 134 aa14.33□□□□□ -0.12
SOX4-201ENST00000244745 CSDC2Q9Y534 153 aaKnown RBP14.33□□□□□ -0.12
SOX4-201ENST00000244745 NAV3Q8IVL0 2385 aa14.33□□□□□ -0.12
SOX4-201ENST00000244745 Q8IZM0 81 aa14.32□□□□□ -0.12
SOX4-201ENST00000244745 RPL28P46779 137 aaKnown RBP14.32□□□□□ -0.12
SOX4-201ENST00000244745 COX17Q14061 63 aa14.32□□□□□ -0.12
SOX4-201ENST00000244745 ZNF843Q8N446 348 aa14.32□□□□□ -0.12
SOX4-201ENST00000244745 SEC61GP60059 68 aa14.32□□□□□ -0.12
SOX4-201ENST00000244745 ADAMTS20P59510 1910 aa14.31□□□□□ -0.12
SOX4-201ENST00000244745 ODF3L2Q3SX64 289 aa14.31□□□□□ -0.12
SOX4-201ENST00000244745 AMELXQ99217 191 aa14.31□□□□□ -0.12
SOX4-201ENST00000244745 M0R378 163 aa14.3□□□□□ -0.12
SOX4-201ENST00000244745 Q6ZSN1 163 aa14.3□□□□□ -0.12
SOX4-201ENST00000244745 LELP1Q5T871 98 aa14.3□□□□□ -0.12
SOX4-201ENST00000244745 GOLGB1Q14789 3259 aaKnown RBP14.3□□□□□ -0.12
SOX4-201ENST00000244745 IL17DQ8TAD2 202 aa14.29□□□□□ -0.12
SOX4-201ENST00000244745 A0A0J9YWU9 116 aa14.29□□□□□ -0.12
SOX4-201ENST00000244745 C14orf177Q52M58 125 aa14.29□□□□□ -0.12
SOX4-201ENST00000244745 A0A1W2PPR1 153 aa14.28□□□□□ -0.12
SOX4-201ENST00000244745 Q8N814 137 aa14.28□□□□□ -0.12
SOX4-201ENST00000244745 WFDC13Q8IUB5 93 aa14.28□□□□□ -0.12
SOX4-201ENST00000244745 SOSTDC1Q6X4U4 206 aa14.27□□□□□ -0.12
SOX4-201ENST00000244745 NTM-AS1Q6ZSK4 140 aa14.27□□□□□ -0.12
SOX4-201ENST00000244745 PPDPFQ9H3Y8 114 aa14.27□□□□□ -0.13
SOX4-201ENST00000244745 HILS1P60008 231 aa14.26□□□□□ -0.13
SOX4-201ENST00000244745 IGLV4-60A0A075B6I1 120 aa14.26□□□□□ -0.13
SOX4-201ENST00000244745 KPRPQ5T749 579 aaPredicted RBP14.26□□□□□ -0.13
SOX4-201ENST00000244745 MUC6Q6W4X9 2439 aa14.26□□□□□ -0.13
SOX4-201ENST00000244745 ZNF73O43830 326 aaPredicted RBP14.26□□□□□ -0.13
SOX4-201ENST00000244745 C9orf116Q5BN46 136 aaPredicted RBP14.26□□□□□ -0.13
SOX4-201ENST00000244745 LINC01546A6NGU7 62 aa14.26□□□□□ -0.13
SOX4-201ENST00000244745 RPL37AP8A6NKH3 93 aa14.26□□□□□ -0.13
SOX4-201ENST00000244745 LY6G6DO95868 133 aa14.25□□□□□ -0.13
SOX4-201ENST00000244745 SMCPP49901 116 aaPredicted RBP14.25□□□□□ -0.13
SOX4-201ENST00000244745 TET2Q6N021 2002 aaPredicted RBP14.25□□□□□ -0.13
SOX4-201ENST00000244745 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.25□□□□□ -0.13
SOX4-201ENST00000244745 A0A087WZ39 114 aa14.25□□□□□ -0.13
SOX4-201ENST00000244745 A6NED7 52 aa14.25□□□□□ -0.13
SOX4-201ENST00000244745 PRR3P79522 188 aaKnown RBP14.25□□□□□ -0.13
SOX4-201ENST00000244745 CYSRT1A8MQ03 144 aa14.24□□□□□ -0.13
SOX4-201ENST00000244745 FAM208BQ5VWN6 2430 aa14.24□□□□□ -0.13
SOX4-201ENST00000244745 TRBV7-7A0A0K0K1E9 115 aa14.24□□□□□ -0.13
SOX4-201ENST00000244745 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.24□□□□□ -0.13
SOX4-201ENST00000244745 LRCOL1A6NCL2 159 aa14.24□□□□□ -0.13
SOX4-201ENST00000244745 CELA1Q9UNI1 258 aa14.23□□□□□ -0.13
SOX4-201ENST00000244745 DHRS4-AS1Q9P1J3 65 aa14.22□□□□□ -0.13
SOX4-201ENST00000244745 UNQ6190/PRO20217Q6UXQ8 127 aa14.21□□□□□ -0.13
SOX4-201ENST00000244745 BRI3O95415 125 aa14.2□□□□□ -0.14
SOX4-201ENST00000244745 PRO0461Q9UI25 63 aa14.2□□□□□ -0.14
SOX4-201ENST00000244745 KIR2DL5BQ8NHK3 375 aa14.18□□□□□ -0.14
SOX4-201ENST00000244745 FHL2Q14192 279 aa14.18□□□□□ -0.14
SOX4-201ENST00000244745 PRYO14603 147 aa14.18□□□□□ -0.14
SOX4-201ENST00000244745 SHISA2Q6UWI4 295 aa14.18□□□□□ -0.14
SOX4-201ENST00000244745 LINC00846Q9NV44 126 aa14.17□□□□□ -0.14
SOX4-201ENST00000244745 KRTAP10-9P60411 292 aa14.16□□□□□ -0.14
SOX4-201ENST00000244745 KIF25-AS1Q9Y6Z4 181 aa14.16□□□□□ -0.14
SOX4-201ENST00000244745 PTPRQQ9UMZ3 2332 aa14.16□□□□□ -0.14
SOX4-201ENST00000244745 TRAV10A0A0B4J240 114 aa14.16□□□□□ -0.14
SOX4-201ENST00000244745 BEAN1Q3B7T3 259 aa14.16□□□□□ -0.14
SOX4-201ENST00000244745 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.14□□□□□ -0.15
SOX4-201ENST00000244745 TRBV10-3A0A0K0K1G6 114 aa14.14□□□□□ -0.15
SOX4-201ENST00000244745 Q8N3U1 123 aa14.14□□□□□ -0.15
SOX4-201ENST00000244745 CASC2Q6XLA1 102 aa14.13□□□□□ -0.15
SOX4-201ENST00000244745 NANOS2P60321 138 aaKnown RBP14.13□□□□□ -0.15
SOX4-201ENST00000244745 PRR15LQ9BU68 103 aa14.13□□□□□ -0.15
SOX4-201ENST00000244745 MUC7Q8TAX7 377 aa14.12□□□□□ -0.15
SOX4-201ENST00000244745 K7ERS5 55 aa14.12□□□□□ -0.15
SOX4-201ENST00000244745 IGLV1-51P01701 117 aa14.12□□□□□ -0.15
SOX4-201ENST00000244745 SPG11Q96JI7 2443 aa14.11□□□□□ -0.15
SOX4-201ENST00000244745 TTC28Q96AY4 2481 aa14.1□□□□□ -0.15
SOX4-201ENST00000244745 IGHV4-30-4P0DP06 118 aa14.1□□□□□ -0.15
SOX4-201ENST00000244745 OTOGLQ3ZCN5 2332 aa14.1□□□□□ -0.15
SOX4-201ENST00000244745 C6orf223Q8N319 242 aa14.1□□□□□ -0.15
SOX4-201ENST00000244745 PLA2G2AP14555 144 aa14.09□□□□□ -0.15
SOX4-201ENST00000244745 SMR3AQ99954 134 aa14.09□□□□□ -0.15
SOX4-201ENST00000244745 WNK1Q9H4A3 2382 aa14.08□□□□□ -0.16
SOX4-201ENST00000244745 PMAIP1Q13794 54 aa14.07□□□□□ -0.16
SOX4-201ENST00000244745 RETNQ9HD89 108 aa14.07□□□□□ -0.16
SOX4-201ENST00000244745 BDP1A6H8Y1 2624 aa14.06□□□□□ -0.16
SOX4-201ENST00000244745 COL4A2P08572 1712 aa14.06□□□□□ -0.16
SOX4-201ENST00000244745 TRBV7-6A0A0J9YX20 115 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms