RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 FAM222AQ5U5X8 452 aa6.8□□□□□ -1.32
COL21A1-201ENST00000244728 LY6G6DO95868 133 aa6.8□□□□□ -1.32
COL21A1-201ENST00000244728 LINC00308Q8TCZ7 52 aa6.8□□□□□ -1.32
COL21A1-201ENST00000244728 IGLV1-40P01703 118 aa6.8□□□□□ -1.32
COL21A1-201ENST00000244728 MIR7-3HGQ8N6C7 128 aa6.8□□□□□ -1.32
COL21A1-201ENST00000244728 C9orf85Q96MD7 179 aa6.8□□□□□ -1.32
COL21A1-201ENST00000244728 ODF3Q96PU9 254 aa6.8□□□□□ -1.32
COL21A1-201ENST00000244728 FAM110AQ9BQ89 295 aa6.8□□□□□ -1.32
COL21A1-201ENST00000244728 ATOX1O00244 68 aa6.79□□□□□ -1.32
COL21A1-201ENST00000244728 NKAPP1Q8N9T2 125 aa6.79□□□□□ -1.32
COL21A1-201ENST00000244728 DCANP1Q8TF63 244 aa6.79□□□□□ -1.32
COL21A1-201ENST00000244728 C1orf43Q9BWL3 253 aa6.79□□□□□ -1.32
COL21A1-201ENST00000244728 LECT2O14960 151 aa6.79□□□□□ -1.32
COL21A1-201ENST00000244728 PYGO1Q9Y3Y4 419 aa6.79□□□□□ -1.32
COL21A1-201ENST00000244728 PRO0255Q9UI72 69 aa6.79□□□□□ -1.32
COL21A1-201ENST00000244728 PIK3CD-AS1Q5SR53 167 aa6.78□□□□□ -1.32
COL21A1-201ENST00000244728 POM121L12Q8N7R1 296 aa6.78□□□□□ -1.32
COL21A1-201ENST00000244728 UBL5Q9BZL1 73 aa6.78□□□□□ -1.32
COL21A1-201ENST00000244728 C14orf132Q9NPU4 83 aa6.78□□□□□ -1.32
COL21A1-201ENST00000244728 SPANXCQ9NY87 97 aa6.78□□□□□ -1.32
COL21A1-201ENST00000244728 GHRHP01286 108 aa6.78□□□□□ -1.32
COL21A1-201ENST00000244728 ADAMTSL4-AS1Q5T5F5 129 aa6.78□□□□□ -1.32
COL21A1-201ENST00000244728 COX7B2Q8TF08 81 aa6.78□□□□□ -1.32
COL21A1-201ENST00000244728 HAMPP81172 84 aa6.77□□□□□ -1.32
COL21A1-201ENST00000244728 CAMK2N2Q96S95 79 aa6.77□□□□□ -1.32
COL21A1-201ENST00000244728 H0YGX0 51 aa6.77□□□□□ -1.33
COL21A1-201ENST00000244728 MRPS36P82909 103 aaKnown RBP6.77□□□□□ -1.33
COL21A1-201ENST00000244728 ORMDL1Q9P0S3 153 aa6.77□□□□□ -1.33
COL21A1-201ENST00000244728 NDUFA1O15239 70 aa6.77□□□□□ -1.33
COL21A1-201ENST00000244728 Q6Q795 121 aa6.77□□□□□ -1.33
COL21A1-201ENST00000244728 KIF25-AS1Q9Y6Z4 181 aa6.77□□□□□ -1.33
COL21A1-201ENST00000244728 J3KT08 172 aa6.76□□□□□ -1.33
COL21A1-201ENST00000244728 PRB2P02812 416 aaPredicted RBP6.76□□□□□ -1.33
COL21A1-201ENST00000244728 SDIM1Q6ZPB5 146 aa6.76□□□□□ -1.33
COL21A1-201ENST00000244728 DEFB105AQ8NG35 78 aa6.76□□□□□ -1.33
COL21A1-201ENST00000244728 LOC100131303A0A0U1RQF7 123 aa6.76□□□□□ -1.33
COL21A1-201ENST00000244728 UQCRQO14949 82 aa6.76□□□□□ -1.33
COL21A1-201ENST00000244728 TEX15Q9BXT5 2789 aa6.76□□□□□ -1.33
COL21A1-201ENST00000244728 LINC00269Q8N2A0 174 aa6.76□□□□□ -1.33
COL21A1-201ENST00000244728 UBE2D4Q9Y2X8 147 aa6.75□□□□□ -1.33
COL21A1-201ENST00000244728 CFAP47Q6ZTR5 3102 aa6.75□□□□□ -1.33
COL21A1-201ENST00000244728 TRBV10-1A0A0K0K1A3 114 aa6.75□□□□□ -1.33
COL21A1-201ENST00000244728 TIRAPP58753 221 aa6.74□□□□□ -1.33
COL21A1-201ENST00000244728 LINC00315P59091 139 aa6.74□□□□□ -1.33
COL21A1-201ENST00000244728 C3orf22Q8N5N4 141 aa6.74□□□□□ -1.33
COL21A1-201ENST00000244728 DMXL2Q8TDJ6 3036 aa6.74□□□□□ -1.33
COL21A1-201ENST00000244728 ZZEF1O43149 2961 aa6.74□□□□□ -1.33
COL21A1-201ENST00000244728 TIMM17BO60830 172 aa6.74□□□□□ -1.33
COL21A1-201ENST00000244728 LINC00526Q96FQ7 95 aa6.74□□□□□ -1.33
COL21A1-201ENST00000244728 ATMQ13315 3056 aa6.74□□□□□ -1.33
COL21A1-201ENST00000244728 PLA2G2AP14555 144 aa6.74□□□□□ -1.33
COL21A1-201ENST00000244728 ODF3L2Q3SX64 289 aa6.74□□□□□ -1.33
COL21A1-201ENST00000244728 HIGD2BQ4VC39 106 aa6.74□□□□□ -1.33
COL21A1-201ENST00000244728 OXLD1Q5BKU9 147 aa6.74□□□□□ -1.33
COL21A1-201ENST00000244728 TACC2O95359 2948 aa6.73□□□□□ -1.33
COL21A1-201ENST00000244728 RPL18AQ02543 176 aaKnown RBP6.73□□□□□ -1.33
COL21A1-201ENST00000244728 SPAG11BQ08648 103 aa6.73□□□□□ -1.33
COL21A1-201ENST00000244728 FHL3Q13643 280 aa6.73□□□□□ -1.33
COL21A1-201ENST00000244728 RBMY1FQ15415 496 aaKnown RBP6.73□□□□□ -1.33
COL21A1-201ENST00000244728 CCL18P55774 89 aa6.73□□□□□ -1.33
COL21A1-201ENST00000244728 ADGRG4Q8IZF6 3080 aa6.73□□□□□ -1.33
COL21A1-201ENST00000244728 FAM240AA0A1B0GVK7 77 aa6.73□□□□□ -1.33
COL21A1-201ENST00000244728 hADV29S1A0JD25 119 aa6.73□□□□□ -1.33
COL21A1-201ENST00000244728 F8WEM9 126 aa6.72□□□□□ -1.33
COL21A1-201ENST00000244728 NCR3O14931 201 aa6.72□□□□□ -1.33
COL21A1-201ENST00000244728 SLPIP03973 132 aa6.72□□□□□ -1.33
COL21A1-201ENST00000244728 IMUPQ9GZP8 106 aa6.72□□□□□ -1.33
COL21A1-201ENST00000244728 ASPMQ8IZT6 3477 aa6.72□□□□□ -1.33
COL21A1-201ENST00000244728 NDUFA7O95182 113 aa6.72□□□□□ -1.33
COL21A1-201ENST00000244728 COL27A1Q8IZC6 1860 aaPredicted RBP6.72□□□□□ -1.33
COL21A1-201ENST00000244728 HILS1P60008 231 aa6.71□□□□□ -1.33
COL21A1-201ENST00000244728 SBSPONQ8IVN8 264 aa6.71□□□□□ -1.33
COL21A1-201ENST00000244728 SVIPQ8NHG7 77 aa6.71□□□□□ -1.33
COL21A1-201ENST00000244728 AMELXQ99217 191 aa6.71□□□□□ -1.33
COL21A1-201ENST00000244728 STAB1Q9NY15 2570 aa6.71□□□□□ -1.34
COL21A1-201ENST00000244728 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.71□□□□□ -1.34
COL21A1-201ENST00000244728 FLNCQ14315 2725 aa6.7□□□□□ -1.34
COL21A1-201ENST00000244728 M0QXV9 152 aa6.7□□□□□ -1.34
COL21A1-201ENST00000244728 UBE2BP63146 152 aa6.7□□□□□ -1.34
COL21A1-201ENST00000244728 LINC00242Q5T6M2 205 aa6.69□□□□□ -1.34
COL21A1-201ENST00000244728 DSCR8Q96T75 97 aa6.69□□□□□ -1.34
COL21A1-201ENST00000244728 CHCHD7Q9BUK0 85 aa6.69□□□□□ -1.34
COL21A1-201ENST00000244728 TRAV23DV6A0A075B6W5 121 aa6.69□□□□□ -1.34
COL21A1-201ENST00000244728 REG3AQ06141 175 aa6.69□□□□□ -1.34
COL21A1-201ENST00000244728 C11orf45Q8TAV5 145 aa6.69□□□□□ -1.34
COL21A1-201ENST00000244728 COX6A2Q02221 97 aa6.69□□□□□ -1.34
COL21A1-201ENST00000244728 XAGE1AQ9HD64 81 aa6.69□□□□□ -1.34
COL21A1-201ENST00000244728 TRBV6-8A0A0A6YYG3 113 aa6.69□□□□□ -1.34
COL21A1-201ENST00000244728 LINC00694P0DN24 101 aa6.69□□□□□ -1.34
COL21A1-201ENST00000244728 NBEAL1Q6ZS30 2694 aa6.69□□□□□ -1.34
COL21A1-201ENST00000244728 COL12A1Q99715 3063 aa6.68□□□□□ -1.34
COL21A1-201ENST00000244728 KALRNO60229 2985 aa6.68□□□□□ -1.34
COL21A1-201ENST00000244728 RMI2Q96E14 147 aa6.68□□□□□ -1.34
COL21A1-201ENST00000244728 IGHV4-28A0A0C4DH34 117 aa6.68□□□□□ -1.34
COL21A1-201ENST00000244728 JMJD7-PLA2G4BH0Y9G9 81 aa6.68□□□□□ -1.34
COL21A1-201ENST00000244728 COX7CP15954 63 aa6.68□□□□□ -1.34
COL21A1-201ENST00000244728 Q6ZSN1 163 aa6.68□□□□□ -1.34
COL21A1-201ENST00000244728 CHCHD10Q8WYQ3 142 aaPredicted RBP6.68□□□□□ -1.34
COL21A1-201ENST00000244728 FAM19A4Q96LR4 140 aa6.68□□□□□ -1.34
COL21A1-201ENST00000244728 NOTCH1P46531 2555 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms