RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 ABCA1O95477 2261 aa4.52□□□□□ -1.69
SGIP1-201ENST00000237247 A0A087WVE0 104 aa4.52□□□□□ -1.69
SGIP1-201ENST00000237247 PAX4O43316 350 aa4.52□□□□□ -1.69
SGIP1-201ENST00000237247 IGHV3-53P01767 116 aa4.52□□□□□ -1.69
SGIP1-201ENST00000237247 SS18Q15532 418 aa4.52□□□□□ -1.69
SGIP1-201ENST00000237247 FAM74A4Q5TZK3 123 aa4.52□□□□□ -1.69
SGIP1-201ENST00000237247 APCP25054 2843 aa4.52□□□□□ -1.69
SGIP1-201ENST00000237247 DNAH6Q9C0G6 4158 aa4.51□□□□□ -1.69
SGIP1-201ENST00000237247 ADAMTSL4-AS1Q5T5F5 129 aa4.51□□□□□ -1.69
SGIP1-201ENST00000237247 PRRC2AP48634 2157 aaKnown RBP4.51□□□□□ -1.69
SGIP1-201ENST00000237247 IGHV4-38-2P0DP08 117 aa4.51□□□□□ -1.69
SGIP1-201ENST00000237247 IGHV4-61A0A0C4DH41 118 aa4.51□□□□□ -1.69
SGIP1-201ENST00000237247 FSHBP01225 129 aa4.51□□□□□ -1.69
SGIP1-201ENST00000237247 BAALC-AS2P0C853 105 aa4.51□□□□□ -1.69
SGIP1-201ENST00000237247 TM2D3Q9BRN9 247 aa4.51□□□□□ -1.69
SGIP1-201ENST00000237247 PKDREJQ9NTG1 2253 aa4.5□□□□□ -1.69
SGIP1-201ENST00000237247 MSMBP08118 114 aa4.5□□□□□ -1.69
SGIP1-201ENST00000237247 DSCR9P59020 149 aa4.5□□□□□ -1.69
SGIP1-201ENST00000237247 S100A7L2Q5SY68 101 aa4.5□□□□□ -1.69
SGIP1-201ENST00000237247 LINC00846Q9NV44 126 aa4.5□□□□□ -1.69
SGIP1-201ENST00000237247 PF4P02776 101 aa4.5□□□□□ -1.69
SGIP1-201ENST00000237247 BLCAPP62952 87 aa4.5□□□□□ -1.69
SGIP1-201ENST00000237247 CIRBPQ14011 172 aaKnown RBP4.5□□□□□ -1.69
SGIP1-201ENST00000237247 DNAL4O96015 105 aa4.5□□□□□ -1.69
SGIP1-201ENST00000237247 RPL28P46779 137 aaKnown RBP4.5□□□□□ -1.69
SGIP1-201ENST00000237247 SPINK13Q1W4C9 94 aa4.5□□□□□ -1.69
SGIP1-201ENST00000237247 BRD3OSQ6XYD6 125 aa4.5□□□□□ -1.69
SGIP1-201ENST00000237247 MRPL55Q7Z7F7 128 aaKnown RBP4.5□□□□□ -1.69
SGIP1-201ENST00000237247 UBE2E2Q96LR5 201 aa4.5□□□□□ -1.69
SGIP1-201ENST00000237247 BBC3Q96PG8 261 aaPredicted RBP4.5□□□□□ -1.69
SGIP1-201ENST00000237247 OVOL2Q9BRP0 275 aa4.5□□□□□ -1.69
SGIP1-201ENST00000237247 Q9UF83 564 aa4.5□□□□□ -1.69
SGIP1-201ENST00000237247 FRAS1Q86XX4 4008 aa4.49□□□□□ -1.69
SGIP1-201ENST00000237247 IGKV3D-7A0A0C4DH55 119 aa4.49□□□□□ -1.69
SGIP1-201ENST00000237247 C11orf72Q8NBR9 251 aa4.49□□□□□ -1.69
SGIP1-201ENST00000237247 LINC00308Q8TCZ7 52 aa4.49□□□□□ -1.69
SGIP1-201ENST00000237247 ACACBO00763 2458 aa4.49□□□□□ -1.69
SGIP1-201ENST00000237247 LY6EQ16553 131 aa4.49□□□□□ -1.69
SGIP1-201ENST00000237247 CHD8Q9HCK8 2581 aa4.49□□□□□ -1.69
SGIP1-201ENST00000237247 POLEQ07864 2286 aa4.48□□□□□ -1.69
SGIP1-201ENST00000237247 TRBV10-1A0A0K0K1A3 114 aa4.48□□□□□ -1.69
SGIP1-201ENST00000237247 C19orf84I3L1E1 186 aa4.48□□□□□ -1.69
SGIP1-201ENST00000237247 ZNF625Q96I27 306 aaPredicted RBP4.48□□□□□ -1.69
SGIP1-201ENST00000237247 IGF2RP11717 2491 aa4.48□□□□□ -1.69
SGIP1-201ENST00000237247 EPG5Q9HCE0 2579 aa4.48□□□□□ -1.69
SGIP1-201ENST00000237247 IGHV3-64A0A075B6Q5 118 aa4.48□□□□□ -1.69
SGIP1-201ENST00000237247 B4DSR2 109 aa4.48□□□□□ -1.69
SGIP1-201ENST00000237247 CEP295Q9C0D2 2601 aa4.47□□□□□ -1.69
SGIP1-201ENST00000237247 IGKV3-7A0A075B6H7 116 aa4.47□□□□□ -1.69
SGIP1-201ENST00000237247 RBM3P98179 157 aaKnown RBP4.47□□□□□ -1.69
SGIP1-201ENST00000237247 ANKHD1Q8IWZ3 2542 aaKnown RBP4.47□□□□□ -1.69
SGIP1-201ENST00000237247 SMIM1B2RUZ4 78 aa4.46□□□□□ -1.69
SGIP1-201ENST00000237247 F8WEM9 126 aa4.46□□□□□ -1.69
SGIP1-201ENST00000237247 Q1T7F1 81 aa4.46□□□□□ -1.69
SGIP1-201ENST00000237247 CCL19Q99731 98 aa4.46□□□□□ -1.69
SGIP1-201ENST00000237247 RBM12B-AS1Q9P1G2 102 aa4.46□□□□□ -1.69
SGIP1-201ENST00000237247 CDKN2A-AS1Q9UH64 79 aa4.46□□□□□ -1.69
SGIP1-201ENST00000237247 NACAE9PAV3 2078 aa4.46□□□□□ -1.7
SGIP1-201ENST00000237247 ERC2-IT1O76042 136 aa4.46□□□□□ -1.7
SGIP1-201ENST00000237247 HOXD3P31249 432 aaPredicted RBP4.46□□□□□ -1.7
SGIP1-201ENST00000237247 LINC00242Q5T6M2 205 aa4.46□□□□□ -1.7
SGIP1-201ENST00000237247 C6orf223Q8N319 242 aa4.46□□□□□ -1.7
SGIP1-201ENST00000237247 IGHV3OR16-12A0A075B7B8 117 aa4.46□□□□□ -1.7
SGIP1-201ENST00000237247 INSP01308 110 aa4.46□□□□□ -1.7
SGIP1-201ENST00000237247 Q6ZSV7 163 aa4.46□□□□□ -1.7
SGIP1-201ENST00000237247 PTPRQQ9UMZ3 2332 aa4.46□□□□□ -1.7
SGIP1-201ENST00000237247 NBASA2RRP1 2371 aa4.46□□□□□ -1.7
SGIP1-201ENST00000237247 ADARB2-AS1A8MUL3 147 aa4.46□□□□□ -1.7
SGIP1-201ENST00000237247 ESRGQ1W209 222 aa4.46□□□□□ -1.7
SGIP1-201ENST00000237247 Q6ZSN1 163 aa4.46□□□□□ -1.7
SGIP1-201ENST00000237247 KTN1-AS1Q86SY8 53 aa4.46□□□□□ -1.7
SGIP1-201ENST00000237247 ZNF702PQ9H963 129 aa4.46□□□□□ -1.7
SGIP1-201ENST00000237247 COL6A6A6NMZ7 2263 aa4.45□□□□□ -1.7
SGIP1-201ENST00000237247 FAM229BQ4G0N7 80 aa4.45□□□□□ -1.7
SGIP1-201ENST00000237247 IGHV4-30-2A0A087WSY4 118 aa4.45□□□□□ -1.7
SGIP1-201ENST00000237247 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.45□□□□□ -1.7
SGIP1-201ENST00000237247 IGKV2-29A2NJV5 120 aaPredicted RBP4.45□□□□□ -1.7
SGIP1-201ENST00000237247 ATRXP46100 2492 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 ROS1P08922 2347 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 TRBV7-4A0A0J9YYF1 115 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 MIFP14174 115 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 PROK1P58294 105 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 SOSTDC1Q6X4U4 206 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.44□□□□□ -1.7
SGIP1-201ENST00000237247 LINC01356Q8N9X3 169 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 Q9H8V8 135 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 MAP6D1Q9H9H5 199 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 TRAV23DV6A0A075B6W5 121 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 DEFB112Q30KQ8 113 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 Q6YL49 198 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 IGKV3-20P01619 116 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 IGHV4-59P01825 116 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 HIST2H2BCQ6DN03 193 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 HIST2H2BDQ6DRA6 164 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 DEFB104AQ8WTQ1 72 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 C4orf3Q8WVX3 66 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 FAM218AQ96MZ4 157 aa4.44□□□□□ -1.7
SGIP1-201ENST00000237247 HUWE1Q7Z6Z7 4374 aaKnown RBP4.44□□□□□ -1.7
SGIP1-201ENST00000237247 DEFB131AP59861 70 aa4.43□□□□□ -1.7
SGIP1-201ENST00000237247 COX6A2Q02221 97 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms