RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 C1orf158Q8N1D5 194 aa9.22□□□□□ -0.93
VAMP4-201ENST00000236192 ESM1Q9NQ30 184 aa9.22□□□□□ -0.93
VAMP4-201ENST00000236192 CCL24O00175 119 aa9.21□□□□□ -0.93
VAMP4-201ENST00000236192 B9D2Q9BPU9 175 aa9.21□□□□□ -0.93
VAMP4-201ENST00000236192 B4DSR2 109 aa9.21□□□□□ -0.94
VAMP4-201ENST00000236192 SRCAPQ6ZRS2 3230 aa9.21□□□□□ -0.94
VAMP4-201ENST00000236192 AKAP6Q13023 2319 aa9.2□□□□□ -0.94
VAMP4-201ENST00000236192 TRBV6-8A0A0A6YYG3 113 aa9.2□□□□□ -0.94
VAMP4-201ENST00000236192 PRR14LQ5THK1 2151 aa9.2□□□□□ -0.94
VAMP4-201ENST00000236192 HCG22E2RYF7 251 aa9.19□□□□□ -0.94
VAMP4-201ENST00000236192 CYSTM1Q9H1C7 97 aa9.19□□□□□ -0.94
VAMP4-201ENST00000236192 ZFP36P26651 326 aaKnown RBP9.19□□□□□ -0.94
VAMP4-201ENST00000236192 DEFB112Q30KQ8 113 aa9.19□□□□□ -0.94
VAMP4-201ENST00000236192 C4orf48Q5BLP8 95 aa9.19□□□□□ -0.94
VAMP4-201ENST00000236192 DSCAMO60469 2012 aa9.19□□□□□ -0.94
VAMP4-201ENST00000236192 LINC00959A0A1B0GUT2 108 aa9.18□□□□□ -0.94
VAMP4-201ENST00000236192 ZNF73O43830 326 aaPredicted RBP9.18□□□□□ -0.94
VAMP4-201ENST00000236192 LINC00208Q96KT6 92 aa9.18□□□□□ -0.94
VAMP4-201ENST00000236192 C10orf142B7Z368 130 aa9.18□□□□□ -0.94
VAMP4-201ENST00000236192 OXTP01178 125 aa9.18□□□□□ -0.94
VAMP4-201ENST00000236192 hDV103S1A0JD37 113 aa9.18□□□□□ -0.94
VAMP4-201ENST00000236192 BPTFQ12830 3046 aa9.18□□□□□ -0.94
VAMP4-201ENST00000236192 APOC4P55056 127 aa9.18□□□□□ -0.94
VAMP4-201ENST00000236192 WFDC13Q8IUB5 93 aa9.18□□□□□ -0.94
VAMP4-201ENST00000236192 CHCHD10Q8WYQ3 142 aaPredicted RBP9.18□□□□□ -0.94
VAMP4-201ENST00000236192 SLURP1P55000 103 aa9.17□□□□□ -0.94
VAMP4-201ENST00000236192 PRR3P79522 188 aaKnown RBP9.17□□□□□ -0.94
VAMP4-201ENST00000236192 SPATA3Q8NHX4 192 aa9.17□□□□□ -0.94
VAMP4-201ENST00000236192 POLEQ07864 2286 aa9.17□□□□□ -0.94
VAMP4-201ENST00000236192 MSMBP08118 114 aa9.16□□□□□ -0.94
VAMP4-201ENST00000236192 MAP6D1Q9H9H5 199 aa9.16□□□□□ -0.94
VAMP4-201ENST00000236192 LTBP2Q14767 1821 aa9.16□□□□□ -0.94
VAMP4-201ENST00000236192 Q8N9L7 120 aa9.16□□□□□ -0.94
VAMP4-201ENST00000236192 A8MUN3 132 aa9.15□□□□□ -0.94
VAMP4-201ENST00000236192 SMIM29Q86T20 159 aa9.15□□□□□ -0.94
VAMP4-201ENST00000236192 Q96MF0 132 aa9.15□□□□□ -0.95
VAMP4-201ENST00000236192 C11orf72Q8NBR9 251 aa9.14□□□□□ -0.95
VAMP4-201ENST00000236192 REG3AQ06141 175 aa9.14□□□□□ -0.95
VAMP4-201ENST00000236192 FP248Q71RG6 208 aaPredicted RBP9.14□□□□□ -0.95
VAMP4-201ENST00000236192 ABCA4P78363 2273 aa9.13□□□□□ -0.95
VAMP4-201ENST00000236192 CYP4F30PQ9H0H9 118 aa9.13□□□□□ -0.95
VAMP4-201ENST00000236192 CD164L2Q6UWJ8 174 aa9.13□□□□□ -0.95
VAMP4-201ENST00000236192 C6orf223Q8N319 242 aa9.13□□□□□ -0.95
VAMP4-201ENST00000236192 IGKV2-28A0A075B6P5 120 aa9.13□□□□□ -0.95
VAMP4-201ENST00000236192 IGKV2D-28P01615 120 aa9.13□□□□□ -0.95
VAMP4-201ENST00000236192 H0Y9J4 135 aa9.13□□□□□ -0.95
VAMP4-201ENST00000236192 DEFB136Q30KP8 78 aa9.13□□□□□ -0.95
VAMP4-201ENST00000236192 ATP11AUNQ6ZP68 121 aa9.12□□□□□ -0.95
VAMP4-201ENST00000236192 DSCR9P59020 149 aa9.12□□□□□ -0.95
VAMP4-201ENST00000236192 TRAV22A0A0B4J277 110 aa9.12□□□□□ -0.95
VAMP4-201ENST00000236192 Q6ZSN1 163 aa9.12□□□□□ -0.95
VAMP4-201ENST00000236192 C10orf25Q5T742 122 aa9.12□□□□□ -0.95
VAMP4-201ENST00000236192 A6NDX4 124 aa9.11□□□□□ -0.95
VAMP4-201ENST00000236192 M0R378 163 aa9.11□□□□□ -0.95
VAMP4-201ENST00000236192 CACNA1EQ15878 2313 aa9.11□□□□□ -0.95
VAMP4-201ENST00000236192 XAGE1AQ9HD64 81 aa9.11□□□□□ -0.95
VAMP4-201ENST00000236192 IGKV4-1P06312 121 aa9.1□□□□□ -0.95
VAMP4-201ENST00000236192 C7orf65Q6ZTY9 151 aa9.1□□□□□ -0.95
VAMP4-201ENST00000236192 IGHV4-38-2P0DP08 117 aa9.1□□□□□ -0.95
VAMP4-201ENST00000236192 LYPD5Q6UWN5 251 aa9.1□□□□□ -0.95
VAMP4-201ENST00000236192 LCA10Q71F78 164 aa9.09□□□□□ -0.95
VAMP4-201ENST00000236192 PCSK5Q92824 1860 aa9.09□□□□□ -0.95
VAMP4-201ENST00000236192 SPTBN1Q01082 2364 aaKnown RBP9.09□□□□□ -0.95
VAMP4-201ENST00000236192 IGHV4-59P01825 116 aa9.09□□□□□ -0.95
VAMP4-201ENST00000236192 PRM2P04554 102 aa9.08□□□□□ -0.96
VAMP4-201ENST00000236192 C1orf64Q8NEQ6 169 aa9.08□□□□□ -0.96
VAMP4-201ENST00000236192 OBSCN-AS1Q96MR7 158 aa9.08□□□□□ -0.96
VAMP4-201ENST00000236192 DHRS4-AS1Q9P1J3 65 aa9.08□□□□□ -0.96
VAMP4-201ENST00000236192 A0A0J9YWU9 116 aa9.08□□□□□ -0.96
VAMP4-201ENST00000236192 LINC01356Q8N9X3 169 aa9.08□□□□□ -0.96
VAMP4-201ENST00000236192 DNAJC9-AS1A6NH13 148 aa9.08□□□□□ -0.96
VAMP4-201ENST00000236192 RBM12B-AS1Q9P1G2 102 aa9.08□□□□□ -0.96
VAMP4-201ENST00000236192 PRO0255Q9UI72 69 aa9.08□□□□□ -0.96
VAMP4-201ENST00000236192 Q1T7F1 81 aa9.07□□□□□ -0.96
VAMP4-201ENST00000236192 IGHV4-30-2A0A087WSY4 118 aa9.06□□□□□ -0.96
VAMP4-201ENST00000236192 H0Y9P7 68 aa9.06□□□□□ -0.96
VAMP4-201ENST00000236192 C9orf129Q5T035 196 aaKnown RBP9.06□□□□□ -0.96
VAMP4-201ENST00000236192 RAI1Q7Z5J4 1906 aaPredicted RBP9.06□□□□□ -0.96
VAMP4-201ENST00000236192 KLK12Q9UKR0 248 aa9.05□□□□□ -0.96
VAMP4-201ENST00000236192 BBC3Q96PG8 261 aaPredicted RBP9.05□□□□□ -0.96
VAMP4-201ENST00000236192 LOC100131303A0A0U1RQF7 123 aa9.05□□□□□ -0.96
VAMP4-201ENST00000236192 A8MTW9 85 aa9.04□□□□□ -0.96
VAMP4-201ENST00000236192 Q9UF83 564 aa9.04□□□□□ -0.96
VAMP4-201ENST00000236192 IGLV4-60A0A075B6I1 120 aa9.04□□□□□ -0.96
VAMP4-201ENST00000236192 APC2O95996 2303 aa9.04□□□□□ -0.96
VAMP4-201ENST00000236192 C1orf137Q5JT78 98 aa9.04□□□□□ -0.96
VAMP4-201ENST00000236192 IGKV2D-24A0A075B6R9 120 aa9.03□□□□□ -0.96
VAMP4-201ENST00000236192 C9orf116Q5BN46 136 aaPredicted RBP9.03□□□□□ -0.96
VAMP4-201ENST00000236192 A0A1W2PNU3 283 aaPredicted RBP9.03□□□□□ -0.96
VAMP4-201ENST00000236192 Q6ZRU5 148 aa9.03□□□□□ -0.96
VAMP4-201ENST00000236192 LY6G6DO95868 133 aa9.03□□□□□ -0.96
VAMP4-201ENST00000236192 GRNP28799 593 aaKnown RBP9.02□□□□□ -0.97
VAMP4-201ENST00000236192 TRBV7-4A0A0J9YYF1 115 aa9.01□□□□□ -0.97
VAMP4-201ENST00000236192 IGLV1-40P01703 118 aa9.01□□□□□ -0.97
VAMP4-201ENST00000236192 CACNA1HO95180 2353 aa9.01□□□□□ -0.97
VAMP4-201ENST00000236192 C4orf3Q8WVX3 66 aa9.01□□□□□ -0.97
VAMP4-201ENST00000236192 A0A1B0GW54 56 aa9□□□□□ -0.97
VAMP4-201ENST00000236192 LINC01006Q8NI28 216 aa9□□□□□ -0.97
VAMP4-201ENST00000236192 PTPRZ1P23471 2315 aaPredicted RBP9□□□□□ -0.97
VAMP4-201ENST00000236192 IGHV3OR16-9A0A0B4J2B5 98 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms