RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 CSDC2Q9Y534 153 aaKnown RBP13.15□□□□□ -0.31
CACTIN-201ENST00000221899 FAM19A3Q7Z5A8 133 aa13.14□□□□□ -0.31
CACTIN-201ENST00000221899 TRBV10-1A0A0K0K1A3 114 aa13.14□□□□□ -0.31
CACTIN-201ENST00000221899 WFDC10AQ9H1F0 79 aa13.14□□□□□ -0.31
CACTIN-201ENST00000221899 TOMM7Q9P0U1 55 aa13.14□□□□□ -0.31
CACTIN-201ENST00000221899 ZNF469Q96JG9 3925 aaPredicted RBP13.13□□□□□ -0.31
CACTIN-201ENST00000221899 CHCHD5Q9BSY4 110 aa13.13□□□□□ -0.31
CACTIN-201ENST00000221899 PLA2G2AP14555 144 aa13.12□□□□□ -0.31
CACTIN-201ENST00000221899 COPS9Q8WXC6 57 aa13.12□□□□□ -0.31
CACTIN-201ENST00000221899 TMEM243Q9BU79 118 aa13.12□□□□□ -0.31
CACTIN-201ENST00000221899 BAALC-AS2P0C853 105 aa13.11□□□□□ -0.31
CACTIN-201ENST00000221899 MRPL23Q16540 153 aaKnown RBP13.11□□□□□ -0.31
CACTIN-201ENST00000221899 Q9HAA7 133 aa13.11□□□□□ -0.31
CACTIN-201ENST00000221899 TRGV2A0A075B6R0 118 aa13.11□□□□□ -0.31
CACTIN-201ENST00000221899 HERV-K104P63124 156 aa13.1□□□□□ -0.31
CACTIN-201ENST00000221899 SMCR5Q8TEV8 140 aa13.1□□□□□ -0.31
CACTIN-201ENST00000221899 CCL24O00175 119 aa13.09□□□□□ -0.31
CACTIN-201ENST00000221899 RPL35AP18077 110 aaKnown RBP13.09□□□□□ -0.31
CACTIN-201ENST00000221899 MIR7-3HGQ8N6C7 128 aa13.09□□□□□ -0.31
CACTIN-201ENST00000221899 SETXQ7Z333 2677 aaKnown RBP13.09□□□□□ -0.31
CACTIN-201ENST00000221899 DEFB113Q30KQ7 82 aa13.08□□□□□ -0.32
CACTIN-201ENST00000221899 TRAV25A0A0B4J276 109 aa13.07□□□□□ -0.32
CACTIN-201ENST00000221899 TRACP01848 142 aa13.07□□□□□ -0.32
CACTIN-201ENST00000221899 GIG44P09565 113 aaPredicted RBP13.07□□□□□ -0.32
CACTIN-201ENST00000221899 LINC00337Q8N6G1 96 aa13.07□□□□□ -0.32
CACTIN-201ENST00000221899 COX7B2Q8TF08 81 aa13.07□□□□□ -0.32
CACTIN-201ENST00000221899 C22orf24Q9Y442 160 aa13.07□□□□□ -0.32
CACTIN-201ENST00000221899 TRBV7-7A0A0K0K1E9 115 aa13.06□□□□□ -0.32
CACTIN-201ENST00000221899 CRPP02741 224 aa13.06□□□□□ -0.32
CACTIN-201ENST00000221899 HIST2H2BCQ6DN03 193 aa13.06□□□□□ -0.32
CACTIN-201ENST00000221899 C3orf56Q8N813 242 aa13.06□□□□□ -0.32
CACTIN-201ENST00000221899 IGLV4-60A0A075B6I1 120 aa13.05□□□□□ -0.32
CACTIN-201ENST00000221899 PLAC8L1A1L4L8 177 aa13.05□□□□□ -0.32
CACTIN-201ENST00000221899 DNAJC9-AS1A6NH13 148 aa13.05□□□□□ -0.32
CACTIN-201ENST00000221899 LINC00158P58513 81 aa13.05□□□□□ -0.32
CACTIN-201ENST00000221899 SND1-IT1Q9HBX3 110 aa13.05□□□□□ -0.32
CACTIN-201ENST00000221899 CCDC168Q8NDH2 2452 aa13.05□□□□□ -0.32
CACTIN-201ENST00000221899 FAM236AA0A1B0GUQ0 79 aa13.05□□□□□ -0.32
CACTIN-201ENST00000221899 FAM236BA0A1B0GV22 79 aa13.05□□□□□ -0.32
CACTIN-201ENST00000221899 IGKV2-28A0A075B6P5 120 aa13.04□□□□□ -0.32
CACTIN-201ENST00000221899 TRGV4A0A0C4DH28 118 aa13.04□□□□□ -0.32
CACTIN-201ENST00000221899 IGKV2D-28P01615 120 aa13.04□□□□□ -0.32
CACTIN-201ENST00000221899 ACYP1P07311 99 aa13.03□□□□□ -0.32
CACTIN-201ENST00000221899 TRAV13-2A0A0B4J235 113 aa13.03□□□□□ -0.32
CACTIN-201ENST00000221899 GAGE2AQ6NT46 116 aa13.03□□□□□ -0.32
CACTIN-201ENST00000221899 NBPF19A0A087WUL8 3843 aa13.02□□□□□ -0.32
CACTIN-201ENST00000221899 PFN2P35080 140 aa13.02□□□□□ -0.32
CACTIN-201ENST00000221899 C11orf68Q9H3H3 251 aaKnown RBP13.02□□□□□ -0.32
CACTIN-201ENST00000221899 C5orf38Q86SI9 138 aa13.02□□□□□ -0.33
CACTIN-201ENST00000221899 ESM1Q9NQ30 184 aa13.02□□□□□ -0.33
CACTIN-201ENST00000221899 RPL28P46779 137 aaKnown RBP13.01□□□□□ -0.33
CACTIN-201ENST00000221899 C16orf74Q96GX8 76 aa13.01□□□□□ -0.33
CACTIN-201ENST00000221899 ITPR3Q14573 2671 aa13.01□□□□□ -0.33
CACTIN-201ENST00000221899 A0A087WYN8 130 aa13.01□□□□□ -0.33
CACTIN-201ENST00000221899 SMIM11BQ8TCY0 68 aa13□□□□□ -0.33
CACTIN-201ENST00000221899 BBC3Q96PG8 261 aaPredicted RBP13□□□□□ -0.33
CACTIN-201ENST00000221899 MALP21145 153 aa13□□□□□ -0.33
CACTIN-201ENST00000221899 TRBV6-4A0A1B0GX49 114 aa12.99□□□□□ -0.33
CACTIN-201ENST00000221899 CCL18P55774 89 aa12.99□□□□□ -0.33
CACTIN-201ENST00000221899 ATP5G1P05496 136 aa12.98□□□□□ -0.33
CACTIN-201ENST00000221899 C9orf129Q5T035 196 aaKnown RBP12.98□□□□□ -0.33
CACTIN-201ENST00000221899 KRTAP1-3Q8IUG1 177 aa12.98□□□□□ -0.33
CACTIN-201ENST00000221899 APCP25054 2843 aa12.98□□□□□ -0.33
CACTIN-201ENST00000221899 TRBV6-8A0A0A6YYG3 113 aa12.98□□□□□ -0.33
CACTIN-201ENST00000221899 LINC00643Q86TS7 51 aa12.98□□□□□ -0.33
CACTIN-201ENST00000221899 IGHV3OR16-9A0A0B4J2B5 98 aa12.97□□□□□ -0.33
CACTIN-201ENST00000221899 PF4P02776 101 aa12.97□□□□□ -0.33
CACTIN-201ENST00000221899 UBR5O95071 2799 aaPredicted RBP12.97□□□□□ -0.33
CACTIN-201ENST00000221899 DNAL4O96015 105 aa12.97□□□□□ -0.33
CACTIN-201ENST00000221899 FAM222AQ5U5X8 452 aa12.97□□□□□ -0.33
CACTIN-201ENST00000221899 WFDC11Q8NEX6 87 aa12.97□□□□□ -0.33
CACTIN-201ENST00000221899 USP24Q9UPU5 2620 aa12.96□□□□□ -0.33
CACTIN-201ENST00000221899 FHL2Q14192 279 aa12.96□□□□□ -0.34
CACTIN-201ENST00000221899 TMEM86BQ8N661 226 aa12.96□□□□□ -0.34
CACTIN-201ENST00000221899 OR13C6PQ8NH95 151 aa12.95□□□□□ -0.34
CACTIN-201ENST00000221899 FLNAP21333 2647 aaKnown RBP12.95□□□□□ -0.34
CACTIN-201ENST00000221899 PAX4O43316 350 aa12.95□□□□□ -0.34
CACTIN-201ENST00000221899 INAFM2P0DMQ5 153 aa12.95□□□□□ -0.34
CACTIN-201ENST00000221899 DEFB130BP0DP73 79 aa12.95□□□□□ -0.34
CACTIN-201ENST00000221899 DEFB130AP0DP74 79 aa12.95□□□□□ -0.34
CACTIN-201ENST00000221899 SMIM20Q8N5G0 67 aa12.95□□□□□ -0.34
CACTIN-201ENST00000221899 C14orf132Q9NPU4 83 aa12.95□□□□□ -0.34
CACTIN-201ENST00000221899 CSNK1G2-AS1Q8NCQ2 148 aa12.94□□□□□ -0.34
CACTIN-201ENST00000221899 IMUPQ9GZP8 106 aa12.94□□□□□ -0.34
CACTIN-201ENST00000221899 FN1P02751 2386 aaKnown RBP12.94□□□□□ -0.34
CACTIN-201ENST00000221899 PPDPFQ9H3Y8 114 aa12.93□□□□□ -0.34
CACTIN-201ENST00000221899 C19orf73Q9NVV2 129 aa12.93□□□□□ -0.34
CACTIN-201ENST00000221899 CLPSL2Q6UWE3 100 aa12.93□□□□□ -0.34
CACTIN-201ENST00000221899 LRRC75A-AS1Q8N1F1 130 aa12.93□□□□□ -0.34
CACTIN-201ENST00000221899 LECT2O14960 151 aa12.92□□□□□ -0.34
CACTIN-201ENST00000221899 OVOL2Q9BRP0 275 aa12.92□□□□□ -0.34
CACTIN-201ENST00000221899 A0A087WZ39 114 aa12.92□□□□□ -0.34
CACTIN-201ENST00000221899 SLPIP03973 132 aa12.92□□□□□ -0.34
CACTIN-201ENST00000221899 XCL1P47992 114 aa12.92□□□□□ -0.34
CACTIN-201ENST00000221899 IBA57-AS1B1ANH7 110 aa12.91□□□□□ -0.34
CACTIN-201ENST00000221899 SDIM1Q6ZPB5 146 aa12.91□□□□□ -0.34
CACTIN-201ENST00000221899 LINC01006Q8NI28 216 aa12.91□□□□□ -0.34
CACTIN-201ENST00000221899 C6orf226Q5I0X4 101 aa12.91□□□□□ -0.34
CACTIN-201ENST00000221899 LINC00959A0A1B0GUT2 108 aa12.9□□□□□ -0.34
CACTIN-201ENST00000221899 MTORP42345 2549 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms