RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 DAZ3Q9NR90 486 aaKnown RBP12.31□□□□□ -0.44
USB1-201ENST00000219281 CSDC2Q9Y534 153 aaKnown RBP12.31□□□□□ -0.44
USB1-201ENST00000219281 TRAV25A0A0B4J276 109 aa12.3□□□□□ -0.44
USB1-201ENST00000219281 PRIMA1Q86XR5 153 aa12.3□□□□□ -0.44
USB1-201ENST00000219281 CDC42SE2Q9NRR3 84 aa12.3□□□□□ -0.44
USB1-201ENST00000219281 SETD2Q9BYW2 2564 aaPredicted RBP12.29□□□□□ -0.44
USB1-201ENST00000219281 NOP10Q9NPE3 64 aaKnown RBP12.29□□□□□ -0.44
USB1-201ENST00000219281 F5H768 121 aa12.28□□□□□ -0.44
USB1-201ENST00000219281 NHLRC4P0CG21 123 aaPredicted RBP12.28□□□□□ -0.44
USB1-201ENST00000219281 CCL24O00175 119 aa12.27□□□□□ -0.44
USB1-201ENST00000219281 TTC32Q5I0X7 151 aa12.27□□□□□ -0.44
USB1-201ENST00000219281 DEFB121Q5J5C9 76 aa12.27□□□□□ -0.44
USB1-201ENST00000219281 COX7A2LO14548 114 aa12.27□□□□□ -0.45
USB1-201ENST00000219281 NDUFV3P56181 108 aaKnown RBP12.27□□□□□ -0.45
USB1-201ENST00000219281 FASNP49327 2511 aaKnown RBP12.27□□□□□ -0.45
USB1-201ENST00000219281 COPS9Q8WXC6 57 aa12.26□□□□□ -0.45
USB1-201ENST00000219281 WNK1Q9H4A3 2382 aa12.26□□□□□ -0.45
USB1-201ENST00000219281 UBE2L6O14933 153 aa12.26□□□□□ -0.45
USB1-201ENST00000219281 Q6Q795 121 aa12.25□□□□□ -0.45
USB1-201ENST00000219281 SHISA2Q6UWI4 295 aa12.25□□□□□ -0.45
USB1-201ENST00000219281 TMEM243Q9BU79 118 aa12.25□□□□□ -0.45
USB1-201ENST00000219281 LOC100131303A0A0U1RQF7 123 aa12.24□□□□□ -0.45
USB1-201ENST00000219281 GAGE7O76087 117 aa12.23□□□□□ -0.45
USB1-201ENST00000219281 GAGE12FP0CL80 117 aa12.23□□□□□ -0.45
USB1-201ENST00000219281 GAGE12GP0CL81 117 aa12.23□□□□□ -0.45
USB1-201ENST00000219281 GAGE12IP0CL82 117 aa12.23□□□□□ -0.45
USB1-201ENST00000219281 HERV-K104P63124 156 aa12.23□□□□□ -0.45
USB1-201ENST00000219281 LINC01006Q8NI28 216 aa12.23□□□□□ -0.45
USB1-201ENST00000219281 GCN1Q92616 2671 aaKnown RBP12.23□□□□□ -0.45
USB1-201ENST00000219281 FAM240AA0A1B0GVK7 77 aa12.23□□□□□ -0.45
USB1-201ENST00000219281 GIG44P09565 113 aaPredicted RBP12.23□□□□□ -0.45
USB1-201ENST00000219281 WFDC10AQ9H1F0 79 aa12.22□□□□□ -0.45
USB1-201ENST00000219281 NIPBLQ6KC79 2804 aaeCLIP12.22□□□□□ -0.45
USB1-201ENST00000219281 TRGV2A0A075B6R0 118 aa12.22□□□□□ -0.45
USB1-201ENST00000219281 GAGE6Q13070 117 aa12.22□□□□□ -0.45
USB1-201ENST00000219281 RNASE1P07998 156 aaKnown RBP12.21□□□□□ -0.45
USB1-201ENST00000219281 MRPL23Q16540 153 aaKnown RBP12.21□□□□□ -0.45
USB1-201ENST00000219281 SMR3AQ99954 134 aa12.21□□□□□ -0.45
USB1-201ENST00000219281 HECTD1Q9ULT8 2610 aa12.21□□□□□ -0.45
USB1-201ENST00000219281 PLAC8L1A1L4L8 177 aa12.21□□□□□ -0.46
USB1-201ENST00000219281 RPL35AP18077 110 aaKnown RBP12.21□□□□□ -0.46
USB1-201ENST00000219281 IGKV3OR2-268A0A0C4DH90 116 aa12.2□□□□□ -0.46
USB1-201ENST00000219281 C16orf74Q96GX8 76 aa12.2□□□□□ -0.46
USB1-201ENST00000219281 C16orf95Q9H693 158 aa12.2□□□□□ -0.46
USB1-201ENST00000219281 B5MCH6 92 aa12.18□□□□□ -0.46
USB1-201ENST00000219281 FAM218AQ96MZ4 157 aa12.18□□□□□ -0.46
USB1-201ENST00000219281 NOTCH2Q04721 2471 aa12.18□□□□□ -0.46
USB1-201ENST00000219281 COX7B2Q8TF08 81 aa12.18□□□□□ -0.46
USB1-201ENST00000219281 TOMM7Q9P0U1 55 aa12.18□□□□□ -0.46
USB1-201ENST00000219281 TRACP01848 142 aa12.17□□□□□ -0.46
USB1-201ENST00000219281 TRGV4A0A0C4DH28 118 aa12.17□□□□□ -0.46
USB1-201ENST00000219281 CCDC179H3BU77 68 aa12.17□□□□□ -0.46
USB1-201ENST00000219281 BAALC-AS2P0C853 105 aa12.17□□□□□ -0.46
USB1-201ENST00000219281 SS18L2Q9UHA2 77 aa12.17□□□□□ -0.46
USB1-201ENST00000219281 TRBV6-4A0A1B0GX49 114 aa12.16□□□□□ -0.46
USB1-201ENST00000219281 MIR7-3HGQ8N6C7 128 aa12.16□□□□□ -0.46
USB1-201ENST00000219281 HIVEP2P31629 2446 aa12.15□□□□□ -0.46
USB1-201ENST00000219281 IGLV4-60A0A075B6I1 120 aa12.15□□□□□ -0.46
USB1-201ENST00000219281 HILS1P60008 231 aa12.15□□□□□ -0.46
USB1-201ENST00000219281 TRAV13-2A0A0B4J235 113 aa12.14□□□□□ -0.47
USB1-201ENST00000219281 CMC4P56277 68 aaPredicted RBP12.14□□□□□ -0.47
USB1-201ENST00000219281 PPDPFQ9H3Y8 114 aa12.14□□□□□ -0.47
USB1-201ENST00000219281 LINC00337Q8N6G1 96 aa12.14□□□□□ -0.47
USB1-201ENST00000219281 CRPP02741 224 aa12.13□□□□□ -0.47
USB1-201ENST00000219281 ACYP1P07311 99 aa12.13□□□□□ -0.47
USB1-201ENST00000219281 OVOL2Q9BRP0 275 aa12.13□□□□□ -0.47
USB1-201ENST00000219281 C2CD3Q4AC94 2353 aa12.13□□□□□ -0.47
USB1-201ENST00000219281 IGKV2-28A0A075B6P5 120 aa12.13□□□□□ -0.47
USB1-201ENST00000219281 IGKV2D-28P01615 120 aa12.13□□□□□ -0.47
USB1-201ENST00000219281 LINC00158P58513 81 aa12.13□□□□□ -0.47
USB1-201ENST00000219281 CSNK1G2-AS1Q8NCQ2 148 aa12.13□□□□□ -0.47
USB1-201ENST00000219281 Q9HAA7 133 aa12.13□□□□□ -0.47
USB1-201ENST00000219281 SND1-IT1Q9HBX3 110 aa12.13□□□□□ -0.47
USB1-201ENST00000219281 C19orf73Q9NVV2 129 aa12.13□□□□□ -0.47
USB1-201ENST00000219281 C22orf24Q9Y442 160 aa12.13□□□□□ -0.47
USB1-201ENST00000219281 SETXQ7Z333 2677 aaKnown RBP12.12□□□□□ -0.47
USB1-201ENST00000219281 NOTCH3Q9UM47 2321 aa12.12□□□□□ -0.47
USB1-201ENST00000219281 RPL28P46779 137 aaKnown RBP12.12□□□□□ -0.47
USB1-201ENST00000219281 CHCHD5Q9BSY4 110 aa12.12□□□□□ -0.47
USB1-201ENST00000219281 OTOGQ6ZRI0 2925 aa12.12□□□□□ -0.47
USB1-201ENST00000219281 TRBV6-8A0A0A6YYG3 113 aa12.12□□□□□ -0.47
USB1-201ENST00000219281 TRBV7-7A0A0K0K1E9 115 aa12.12□□□□□ -0.47
USB1-201ENST00000219281 PF4P02776 101 aa12.12□□□□□ -0.47
USB1-201ENST00000219281 FHL2Q14192 279 aa12.12□□□□□ -0.47
USB1-201ENST00000219281 IGLV1-51P01701 117 aa12.11□□□□□ -0.47
USB1-201ENST00000219281 FAM222AQ5U5X8 452 aa12.11□□□□□ -0.47
USB1-201ENST00000219281 SMCR5Q8TEV8 140 aa12.11□□□□□ -0.47
USB1-201ENST00000219281 IGHV3OR16-9A0A0B4J2B5 98 aa12.1□□□□□ -0.47
USB1-201ENST00000219281 C5orf38Q86SI9 138 aa12.09□□□□□ -0.47
USB1-201ENST00000219281 JMJD1CQ15652 2540 aa12.09□□□□□ -0.47
USB1-201ENST00000219281 LY6G6DO95868 133 aa12.09□□□□□ -0.47
USB1-201ENST00000219281 CCL18P55774 89 aa12.08□□□□□ -0.48
USB1-201ENST00000219281 SMIM11BQ8TCY0 68 aa12.08□□□□□ -0.48
USB1-201ENST00000219281 MALP21145 153 aa12.07□□□□□ -0.48
USB1-201ENST00000219281 PFN2P35080 140 aa12.07□□□□□ -0.48
USB1-201ENST00000219281 FAM110AQ9BQ89 295 aa12.07□□□□□ -0.48
USB1-201ENST00000219281 A0A087WZ39 114 aa12.07□□□□□ -0.48
USB1-201ENST00000219281 KRTAP10-3P60369 221 aa12.07□□□□□ -0.48
USB1-201ENST00000219281 A0A087WYN8 130 aa12.06□□□□□ -0.48
USB1-201ENST00000219281 DEFB130BP0DP73 79 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms