RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 TRAV13-2A0A0B4J235 113 aa7.04□□□□□ -1.28
CSTF1-201ENST00000217109 SMR3AQ99954 134 aa7.04□□□□□ -1.28
CSTF1-201ENST00000217109 SCGB1A1P11684 91 aa7.04□□□□□ -1.28
CSTF1-201ENST00000217109 UBE2D3P61077 147 aa7.04□□□□□ -1.28
CSTF1-201ENST00000217109 UBE2D2P62837 147 aa7.04□□□□□ -1.28
CSTF1-201ENST00000217109 LINC00242Q5T6M2 205 aa7.04□□□□□ -1.28
CSTF1-201ENST00000217109 AMELXQ99217 191 aa7.04□□□□□ -1.28
CSTF1-201ENST00000217109 Q9HAA7 133 aa7.04□□□□□ -1.28
CSTF1-201ENST00000217109 ATRQ13535 2644 aa7.04□□□□□ -1.28
CSTF1-201ENST00000217109 LINC00482Q8N8I6 264 aa7.04□□□□□ -1.28
CSTF1-201ENST00000217109 TIRAPP58753 221 aa7.03□□□□□ -1.28
CSTF1-201ENST00000217109 CELSR1Q9NYQ6 3014 aa7.03□□□□□ -1.28
CSTF1-201ENST00000217109 NDUFA1O15239 70 aa7.03□□□□□ -1.28
CSTF1-201ENST00000217109 TRBV30A0A0K0K1B3 111 aa7.02□□□□□ -1.29
CSTF1-201ENST00000217109 XGP55808 180 aa7.02□□□□□ -1.29
CSTF1-201ENST00000217109 C11orf72Q8NBR9 251 aa7.01□□□□□ -1.29
CSTF1-201ENST00000217109 NBEAL2Q6ZNJ1 2754 aa7.01□□□□□ -1.29
CSTF1-201ENST00000217109 ATP5G1P05496 136 aa7.01□□□□□ -1.29
CSTF1-201ENST00000217109 SPENQ96T58 3664 aaKnown RBP7.01□□□□□ -1.29
CSTF1-201ENST00000217109 H3BT86 120 aa7.01□□□□□ -1.29
CSTF1-201ENST00000217109 SMCPP49901 116 aaPredicted RBP7.01□□□□□ -1.29
CSTF1-201ENST00000217109 CDC42SE2Q9NRR3 84 aa7.01□□□□□ -1.29
CSTF1-201ENST00000217109 TRBV6-8A0A0A6YYG3 113 aa7□□□□□ -1.29
CSTF1-201ENST00000217109 FAM222AQ5U5X8 452 aa7□□□□□ -1.29
CSTF1-201ENST00000217109 SPATA25Q9BR10 227 aa7□□□□□ -1.29
CSTF1-201ENST00000217109 GCN1Q92616 2671 aaKnown RBP7□□□□□ -1.29
CSTF1-201ENST00000217109 SPANXDQ9BXN6 97 aa7□□□□□ -1.29
CSTF1-201ENST00000217109 SPANXCQ9NY87 97 aa7□□□□□ -1.29
CSTF1-201ENST00000217109 NF1P21359 2839 aa7□□□□□ -1.29
CSTF1-201ENST00000217109 BEAN1Q3B7T3 259 aa7□□□□□ -1.29
CSTF1-201ENST00000217109 PRO0461Q9UI25 63 aa6.99□□□□□ -1.29
CSTF1-201ENST00000217109 PRO0255Q9UI72 69 aa6.99□□□□□ -1.29
CSTF1-201ENST00000217109 TRAV26-1A0A087WT03 109 aa6.99□□□□□ -1.29
CSTF1-201ENST00000217109 TRBV6-4A0A1B0GX49 114 aa6.99□□□□□ -1.29
CSTF1-201ENST00000217109 B5MCH6 92 aa6.99□□□□□ -1.29
CSTF1-201ENST00000217109 INAFM2P0DMQ5 153 aa6.99□□□□□ -1.29
CSTF1-201ENST00000217109 APOC4P55056 127 aa6.99□□□□□ -1.29
CSTF1-201ENST00000217109 SMIM1B2RUZ4 78 aa6.99□□□□□ -1.29
CSTF1-201ENST00000217109 LECT2O14960 151 aa6.98□□□□□ -1.29
CSTF1-201ENST00000217109 HIST1H4AP62805 103 aaKnown RBP6.98□□□□□ -1.29
CSTF1-201ENST00000217109 LAMTOR3Q9UHA4 124 aa6.98□□□□□ -1.29
CSTF1-201ENST00000217109 COX7A2LO14548 114 aa6.98□□□□□ -1.29
CSTF1-201ENST00000217109 LINC00269Q8N2A0 174 aa6.98□□□□□ -1.29
CSTF1-201ENST00000217109 H7C423 109 aa6.98□□□□□ -1.29
CSTF1-201ENST00000217109 IGLV4-60A0A075B6I1 120 aa6.98□□□□□ -1.29
CSTF1-201ENST00000217109 OVOL2Q9BRP0 275 aa6.97□□□□□ -1.29
CSTF1-201ENST00000217109 A0A096LNT2 108 aa6.97□□□□□ -1.29
CSTF1-201ENST00000217109 INAFM1C9JVW0 142 aa6.97□□□□□ -1.29
CSTF1-201ENST00000217109 C9orf66Q5T8R8 295 aa6.97□□□□□ -1.29
CSTF1-201ENST00000217109 CELSR2Q9HCU4 2923 aa6.97□□□□□ -1.29
CSTF1-201ENST00000217109 NTM-AS1Q6ZSK4 140 aa6.97□□□□□ -1.29
CSTF1-201ENST00000217109 Q8N2B8 174 aa6.97□□□□□ -1.29
CSTF1-201ENST00000217109 RNF183Q96D59 192 aa6.97□□□□□ -1.29
CSTF1-201ENST00000217109 FBN2P35556 2912 aa6.97□□□□□ -1.29
CSTF1-201ENST00000217109 LST1O00453 97 aa6.96□□□□□ -1.29
CSTF1-201ENST00000217109 IGLV1-51P01701 117 aa6.96□□□□□ -1.3
CSTF1-201ENST00000217109 KLK12Q9UKR0 248 aa6.96□□□□□ -1.3
CSTF1-201ENST00000217109 TIMM17BO60830 172 aa6.96□□□□□ -1.3
CSTF1-201ENST00000217109 FSHBP01225 129 aa6.96□□□□□ -1.3
CSTF1-201ENST00000217109 F8P00451 2351 aa6.95□□□□□ -1.3
CSTF1-201ENST00000217109 SLPIP03973 132 aa6.95□□□□□ -1.3
CSTF1-201ENST00000217109 HILS1P60008 231 aa6.95□□□□□ -1.3
CSTF1-201ENST00000217109 C3orf56Q8N813 242 aa6.95□□□□□ -1.3
CSTF1-201ENST00000217109 LINC00526Q96FQ7 95 aa6.95□□□□□ -1.3
CSTF1-201ENST00000217109 EDA2RQ9HAV5 297 aa6.95□□□□□ -1.3
CSTF1-201ENST00000217109 SPART-AS1P0CW21 52 aa6.94□□□□□ -1.3
CSTF1-201ENST00000217109 ZNF561-AS1K7EIQ3 104 aa6.94□□□□□ -1.3
CSTF1-201ENST00000217109 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.94□□□□□ -1.3
CSTF1-201ENST00000217109 MRPL23Q16540 153 aaKnown RBP6.94□□□□□ -1.3
CSTF1-201ENST00000217109 SS18L2Q9UHA2 77 aa6.94□□□□□ -1.3
CSTF1-201ENST00000217109 H0YGX0 51 aa6.93□□□□□ -1.3
CSTF1-201ENST00000217109 CDIP1Q9H305 208 aa6.93□□□□□ -1.3
CSTF1-201ENST00000217109 C14orf132Q9NPU4 83 aa6.93□□□□□ -1.3
CSTF1-201ENST00000217109 LINC00959A0A1B0GUT2 108 aa6.93□□□□□ -1.3
CSTF1-201ENST00000217109 NCR3O14931 201 aa6.93□□□□□ -1.3
CSTF1-201ENST00000217109 ITPR2Q14571 2701 aa6.93□□□□□ -1.3
CSTF1-201ENST00000217109 LY6G6DO95868 133 aa6.93□□□□□ -1.3
CSTF1-201ENST00000217109 IGKV3D-7A0A0C4DH55 119 aa6.93□□□□□ -1.3
CSTF1-201ENST00000217109 FAM236AA0A1B0GUQ0 79 aa6.93□□□□□ -1.3
CSTF1-201ENST00000217109 FAM236BA0A1B0GV22 79 aa6.93□□□□□ -1.3
CSTF1-201ENST00000217109 SETXQ7Z333 2677 aaKnown RBP6.92□□□□□ -1.3
CSTF1-201ENST00000217109 EIF4EBP3O60516 100 aaPredicted RBP6.92□□□□□ -1.3
CSTF1-201ENST00000217109 FHL2Q14192 279 aa6.92□□□□□ -1.3
CSTF1-201ENST00000217109 ORMDL1Q9P0S3 153 aa6.92□□□□□ -1.3
CSTF1-201ENST00000217109 UBR5O95071 2799 aaPredicted RBP6.92□□□□□ -1.3
CSTF1-201ENST00000217109 REG3AQ06141 175 aa6.92□□□□□ -1.3
CSTF1-201ENST00000217109 CHCHD10Q8WYQ3 142 aaPredicted RBP6.92□□□□□ -1.3
CSTF1-201ENST00000217109 MXRA5Q9NR99 2828 aa6.91□□□□□ -1.3
CSTF1-201ENST00000217109 CCL18P55774 89 aa6.91□□□□□ -1.3
CSTF1-201ENST00000217109 SPAG11BQ08648 103 aa6.91□□□□□ -1.3
CSTF1-201ENST00000217109 CSDC2Q9Y534 153 aaKnown RBP6.91□□□□□ -1.3
CSTF1-201ENST00000217109 IBA57-AS1B1ANH7 110 aa6.91□□□□□ -1.3
CSTF1-201ENST00000217109 NDUFV3P56181 108 aaKnown RBP6.91□□□□□ -1.3
CSTF1-201ENST00000217109 CUBNO60494 3623 aa6.91□□□□□ -1.3
CSTF1-201ENST00000217109 DEFB121Q5J5C9 76 aa6.9□□□□□ -1.3
CSTF1-201ENST00000217109 SMIM11BQ8TCY0 68 aa6.9□□□□□ -1.3
CSTF1-201ENST00000217109 UNC79Q9P2D8 2635 aa6.9□□□□□ -1.3
CSTF1-201ENST00000217109 ACYP1P07311 99 aa6.9□□□□□ -1.3
CSTF1-201ENST00000217109 FHL3Q13643 280 aa6.9□□□□□ -1.3
CSTF1-201ENST00000217109 C9orf153Q5TBE3 101 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms