RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ATG2AQ2TAZ0 1938 aa9.97□□□□□ -0.81
SIX4-201ENST00000216513 FLNBO75369 2602 aaKnown RBP9.97□□□□□ -0.81
SIX4-201ENST00000216513 BRCA2P51587 3418 aa9.96□□□□□ -0.81
SIX4-201ENST00000216513 MP68P56378 58 aa9.96□□□□□ -0.81
SIX4-201ENST00000216513 C11orf21Q9P2W6 132 aa9.96□□□□□ -0.82
SIX4-201ENST00000216513 RPL37AP8A6NKH3 93 aa9.95□□□□□ -0.82
SIX4-201ENST00000216513 LINC00474Q9P2X8 69 aa9.95□□□□□ -0.82
SIX4-201ENST00000216513 M0QY20 66 aa9.95□□□□□ -0.82
SIX4-201ENST00000216513 ACYP1P07311 99 aa9.95□□□□□ -0.82
SIX4-201ENST00000216513 IGLV4-69A0A075B6H9 119 aa9.95□□□□□ -0.82
SIX4-201ENST00000216513 F8P00451 2351 aa9.95□□□□□ -0.82
SIX4-201ENST00000216513 PLAC8L1A1L4L8 177 aa9.94□□□□□ -0.82
SIX4-201ENST00000216513 TEX49A0A1B0GTD5 131 aa9.94□□□□□ -0.82
SIX4-201ENST00000216513 CPAMD8Q8IZJ3 1885 aa9.94□□□□□ -0.82
SIX4-201ENST00000216513 MTORP42345 2549 aa9.94□□□□□ -0.82
SIX4-201ENST00000216513 IGKV4-1P06312 121 aa9.94□□□□□ -0.82
SIX4-201ENST00000216513 CRIP2P52943 208 aaPredicted RBP9.94□□□□□ -0.82
SIX4-201ENST00000216513 TRAV23DV6A0A075B6W5 121 aa9.93□□□□□ -0.82
SIX4-201ENST00000216513 A0A0J9YXY3 114 aa9.93□□□□□ -0.82
SIX4-201ENST00000216513 KLLNB2CW77 178 aa9.93□□□□□ -0.82
SIX4-201ENST00000216513 C1orf158Q8N1D5 194 aa9.93□□□□□ -0.82
SIX4-201ENST00000216513 TEN1Q86WV5 123 aa9.92□□□□□ -0.82
SIX4-201ENST00000216513 SPINK6Q6UWN8 80 aa9.92□□□□□ -0.82
SIX4-201ENST00000216513 CD164L2Q6UWJ8 174 aa9.92□□□□□ -0.82
SIX4-201ENST00000216513 SDIM1Q6ZPB5 146 aa9.92□□□□□ -0.82
SIX4-201ENST00000216513 IGLV9-49A0A0B4J1Y8 123 aa9.92□□□□□ -0.82
SIX4-201ENST00000216513 RNASE3P12724 160 aaKnown RBP9.91□□□□□ -0.82
SIX4-201ENST00000216513 RNF185Q96GF1 192 aa9.91□□□□□ -0.82
SIX4-201ENST00000216513 A0A1B0GXF2 115 aa9.91□□□□□ -0.82
SIX4-201ENST00000216513 COA6Q5JTJ3 125 aaKnown RBP9.91□□□□□ -0.82
SIX4-201ENST00000216513 Q8N2B8 174 aa9.91□□□□□ -0.82
SIX4-201ENST00000216513 SMIM20Q8N5G0 67 aa9.91□□□□□ -0.82
SIX4-201ENST00000216513 IGLC6P0CF74 106 aa9.91□□□□□ -0.82
SIX4-201ENST00000216513 USP9YO00507 2555 aaPredicted RBP9.91□□□□□ -0.82
SIX4-201ENST00000216513 SETD2Q9BYW2 2564 aaPredicted RBP9.91□□□□□ -0.82
SIX4-201ENST00000216513 SPATA3Q8NHX4 192 aa9.9□□□□□ -0.82
SIX4-201ENST00000216513 TRBV10-2A0A0K0K1G8 114 aa9.9□□□□□ -0.82
SIX4-201ENST00000216513 MKI67P46013 3256 aaKnown RBP9.9□□□□□ -0.82
SIX4-201ENST00000216513 LINC00959A0A1B0GUT2 108 aa9.9□□□□□ -0.83
SIX4-201ENST00000216513 CELA1Q9UNI1 258 aa9.9□□□□□ -0.83
SIX4-201ENST00000216513 WFDC10BQ8IUB3 73 aa9.89□□□□□ -0.83
SIX4-201ENST00000216513 IGLV4-3A0A075B6K6 122 aa9.89□□□□□ -0.83
SIX4-201ENST00000216513 ACANP16112 2415 aa9.89□□□□□ -0.83
SIX4-201ENST00000216513 ZNF706Q9Y5V0 76 aaPredicted RBP9.89□□□□□ -0.83
SIX4-201ENST00000216513 C3orf84H3BNL1 204 aa9.89□□□□□ -0.83
SIX4-201ENST00000216513 HECTD1Q9ULT8 2610 aa9.88□□□□□ -0.83
SIX4-201ENST00000216513 USP17L23D6RBM5 183 aa9.88□□□□□ -0.83
SIX4-201ENST00000216513 TMEM256-PLSCR3K7ERE1 68 aa9.88□□□□□ -0.83
SIX4-201ENST00000216513 SVIPQ8NHG7 77 aa9.88□□□□□ -0.83
SIX4-201ENST00000216513 ANKRD17O75179 2603 aaKnown RBP9.88□□□□□ -0.83
SIX4-201ENST00000216513 POM121L12Q8N7R1 296 aa9.87□□□□□ -0.83
SIX4-201ENST00000216513 UBE2D2P62837 147 aa9.87□□□□□ -0.83
SIX4-201ENST00000216513 JMJD7-PLA2G4BH0Y9G9 81 aa9.87□□□□□ -0.83
SIX4-201ENST00000216513 MLST8Q9BVC4 326 aa9.87□□□□□ -0.83
SIX4-201ENST00000216513 C16orf90A8MZG2 172 aa9.86□□□□□ -0.83
SIX4-201ENST00000216513 ATOX1O00244 68 aa9.86□□□□□ -0.83
SIX4-201ENST00000216513 C9orf116Q5BN46 136 aaPredicted RBP9.86□□□□□ -0.83
SIX4-201ENST00000216513 ZNF580Q9UK33 172 aa9.86□□□□□ -0.83
SIX4-201ENST00000216513 FHL2Q14192 279 aa9.86□□□□□ -0.83
SIX4-201ENST00000216513 C6orf223Q8N319 242 aa9.86□□□□□ -0.83
SIX4-201ENST00000216513 HIGD1BQ9P298 99 aa9.86□□□□□ -0.83
SIX4-201ENST00000216513 ZNF22P17026 224 aaPredicted RBP9.86□□□□□ -0.83
SIX4-201ENST00000216513 LINC01556Q5JQF7 62 aa9.86□□□□□ -0.83
SIX4-201ENST00000216513 C1orf137Q5JT78 98 aa9.85□□□□□ -0.83
SIX4-201ENST00000216513 M0QXV9 152 aa9.85□□□□□ -0.83
SIX4-201ENST00000216513 LYPD5Q6UWN5 251 aa9.85□□□□□ -0.83
SIX4-201ENST00000216513 PRR3P79522 188 aaKnown RBP9.84□□□□□ -0.83
SIX4-201ENST00000216513 BPY2O14599 106 aa9.84□□□□□ -0.83
SIX4-201ENST00000216513 MT-ATP8P03928 68 aa9.84□□□□□ -0.83
SIX4-201ENST00000216513 UPK3BQ9BT76 320 aa9.84□□□□□ -0.83
SIX4-201ENST00000216513 SPANXDQ9BXN6 97 aa9.84□□□□□ -0.83
SIX4-201ENST00000216513 TMEM223A0PJW6 202 aa9.83□□□□□ -0.84
SIX4-201ENST00000216513 XGP55808 180 aa9.83□□□□□ -0.84
SIX4-201ENST00000216513 FAM229AH3BQW9 127 aa9.83□□□□□ -0.84
SIX4-201ENST00000216513 BEAN1Q3B7T3 259 aa9.82□□□□□ -0.84
SIX4-201ENST00000216513 TRIAP1O43715 76 aa9.82□□□□□ -0.84
SIX4-201ENST00000216513 PRR4Q16378 134 aa9.82□□□□□ -0.84
SIX4-201ENST00000216513 TSHBP01222 138 aa9.82□□□□□ -0.84
SIX4-201ENST00000216513 MPLKIPQ8TAP9 179 aa9.82□□□□□ -0.84
SIX4-201ENST00000216513 RPL28P46779 137 aaKnown RBP9.81□□□□□ -0.84
SIX4-201ENST00000216513 COX6A2Q02221 97 aa9.81□□□□□ -0.84
SIX4-201ENST00000216513 CIRBP-AS1Q8TBR5 109 aa9.81□□□□□ -0.84
SIX4-201ENST00000216513 ENHOQ6UWT2 76 aa9.81□□□□□ -0.84
SIX4-201ENST00000216513 CYSRT1A8MQ03 144 aa9.81□□□□□ -0.84
SIX4-201ENST00000216513 CASC2Q6XLA1 102 aa9.81□□□□□ -0.84
SIX4-201ENST00000216513 SPANXCQ9NY87 97 aa9.81□□□□□ -0.84
SIX4-201ENST00000216513 SEC61GP60059 68 aa9.8□□□□□ -0.84
SIX4-201ENST00000216513 J3QL48 77 aa9.8□□□□□ -0.84
SIX4-201ENST00000216513 XIRP2A4UGR9 3374 aa9.8□□□□□ -0.84
SIX4-201ENST00000216513 SPTSSBQ8NFR3 76 aa9.79□□□□□ -0.84
SIX4-201ENST00000216513 RETNLBQ9BQ08 111 aa9.79□□□□□ -0.84
SIX4-201ENST00000216513 H3BT86 120 aa9.79□□□□□ -0.84
SIX4-201ENST00000216513 C6orf99Q4VX62 202 aa9.79□□□□□ -0.84
SIX4-201ENST00000216513 LINC00308Q8TCZ7 52 aa9.78□□□□□ -0.84
SIX4-201ENST00000216513 IBA57-AS1B1ANH7 110 aa9.78□□□□□ -0.84
SIX4-201ENST00000216513 H3BQ85 93 aa9.78□□□□□ -0.84
SIX4-201ENST00000216513 NRACQ8N912 160 aa9.78□□□□□ -0.84
SIX4-201ENST00000216513 BRK1Q8WUW1 75 aa9.78□□□□□ -0.84
SIX4-201ENST00000216513 C20orf197Q8N268 126 aa9.77□□□□□ -0.85
SIX4-201ENST00000216513 M0R378 163 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms