RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 NDUFA1O15239 70 aa5.9□□□□□ -1.47
CDC27-201ENST00000066544 A0A096LPF7 62 aa5.9□□□□□ -1.47
CDC27-201ENST00000066544 TIRAPP58753 221 aa5.9□□□□□ -1.47
CDC27-201ENST00000066544 TMEM243Q9BU79 118 aa5.89□□□□□ -1.47
CDC27-201ENST00000066544 AKAP9Q99996 3911 aa5.89□□□□□ -1.47
CDC27-201ENST00000066544 TRAV26-1A0A087WT03 109 aa5.89□□□□□ -1.47
CDC27-201ENST00000066544 TRAV4A0A0B4J268 109 aa5.89□□□□□ -1.47
CDC27-201ENST00000066544 TRAV8-4A0A0B4J246 113 aa5.89□□□□□ -1.47
CDC27-201ENST00000066544 GIG44P09565 113 aaPredicted RBP5.89□□□□□ -1.47
CDC27-201ENST00000066544 TTC32Q5I0X7 151 aa5.89□□□□□ -1.47
CDC27-201ENST00000066544 C5orf38Q86SI9 138 aa5.89□□□□□ -1.47
CDC27-201ENST00000066544 CDC42SE2Q9NRR3 84 aa5.89□□□□□ -1.47
CDC27-201ENST00000066544 CLPSL2Q6UWE3 100 aa5.89□□□□□ -1.47
CDC27-201ENST00000066544 SNCGO76070 127 aa5.88□□□□□ -1.47
CDC27-201ENST00000066544 TEX29Q8N6K0 151 aa5.88□□□□□ -1.47
CDC27-201ENST00000066544 RNF183Q96D59 192 aa5.88□□□□□ -1.47
CDC27-201ENST00000066544 TMEM262E9PQX1 116 aa5.88□□□□□ -1.47
CDC27-201ENST00000066544 SMR3AQ99954 134 aa5.88□□□□□ -1.47
CDC27-201ENST00000066544 PFN2P35080 140 aa5.88□□□□□ -1.47
CDC27-201ENST00000066544 DAZ2Q13117 558 aaKnown RBP5.88□□□□□ -1.47
CDC27-201ENST00000066544 DAZ4Q86SG3 579 aaKnown RBP5.88□□□□□ -1.47
CDC27-201ENST00000066544 DAZ3Q9NR90 486 aaKnown RBP5.88□□□□□ -1.47
CDC27-201ENST00000066544 IGLV4-60A0A075B6I1 120 aa5.87□□□□□ -1.47
CDC27-201ENST00000066544 C15orf53Q8NAA6 179 aa5.87□□□□□ -1.47
CDC27-201ENST00000066544 TRAV25A0A0B4J276 109 aa5.87□□□□□ -1.47
CDC27-201ENST00000066544 IFITM1P13164 125 aa5.87□□□□□ -1.47
CDC27-201ENST00000066544 IGLV5-45A0A087WSX0 123 aa5.87□□□□□ -1.47
CDC27-201ENST00000066544 TRBV10-1A0A0K0K1A3 114 aa5.87□□□□□ -1.47
CDC27-201ENST00000066544 GAGE2BQ13066 116 aa5.87□□□□□ -1.47
CDC27-201ENST00000066544 GAGE2EQ4V326 116 aa5.87□□□□□ -1.47
CDC27-201ENST00000066544 LRRC75A-AS1Q8N1F1 130 aa5.87□□□□□ -1.47
CDC27-201ENST00000066544 ANAPC13Q9BS18 74 aa5.87□□□□□ -1.47
CDC27-201ENST00000066544 GAGE2DQ9UEU5 116 aa5.87□□□□□ -1.47
CDC27-201ENST00000066544 IGLV5-39A0A0G2JS06 123 aa5.87□□□□□ -1.47
CDC27-201ENST00000066544 LST1O00453 97 aa5.87□□□□□ -1.47
CDC27-201ENST00000066544 LINC00158P58513 81 aa5.87□□□□□ -1.47
CDC27-201ENST00000066544 DEFB4AO15263 64 aa5.86□□□□□ -1.47
CDC27-201ENST00000066544 MIR7-3HGQ8N6C7 128 aa5.86□□□□□ -1.47
CDC27-201ENST00000066544 Q9HAA7 133 aa5.86□□□□□ -1.47
CDC27-201ENST00000066544 PLAC8L1A1L4L8 177 aa5.85□□□□□ -1.47
CDC27-201ENST00000066544 TMEM86BQ8N661 226 aa5.85□□□□□ -1.47
CDC27-201ENST00000066544 TEP1Q99973 2627 aaKnown RBP5.85□□□□□ -1.47
CDC27-201ENST00000066544 F5H768 121 aa5.85□□□□□ -1.47
CDC27-201ENST00000066544 IL17DQ8TAD2 202 aa5.85□□□□□ -1.47
CDC27-201ENST00000066544 PDZD2O15018 2839 aa5.85□□□□□ -1.47
CDC27-201ENST00000066544 TENM1Q9UKZ4 2725 aa5.85□□□□□ -1.47
CDC27-201ENST00000066544 TIMM17BO60830 172 aa5.85□□□□□ -1.47
CDC27-201ENST00000066544 CLUHP3Q96NS8 147 aa5.85□□□□□ -1.47
CDC27-201ENST00000066544 C16orf74Q96GX8 76 aa5.85□□□□□ -1.47
CDC27-201ENST00000066544 XCL1P47992 114 aa5.84□□□□□ -1.47
CDC27-201ENST00000066544 H3BT86 120 aa5.84□□□□□ -1.47
CDC27-201ENST00000066544 IGLV1-51P01701 117 aa5.84□□□□□ -1.47
CDC27-201ENST00000066544 OR13C6PQ8NH95 151 aa5.84□□□□□ -1.47
CDC27-201ENST00000066544 COX7B2Q8TF08 81 aa5.84□□□□□ -1.47
CDC27-201ENST00000066544 PF4P02776 101 aa5.84□□□□□ -1.48
CDC27-201ENST00000066544 LINC00482Q8N8I6 264 aa5.83□□□□□ -1.48
CDC27-201ENST00000066544 FAM218AQ96MZ4 157 aa5.83□□□□□ -1.48
CDC27-201ENST00000066544 C19orf73Q9NVV2 129 aa5.83□□□□□ -1.48
CDC27-201ENST00000066544 SND1-IT1Q9HBX3 110 aa5.83□□□□□ -1.48
CDC27-201ENST00000066544 COX7A2LO14548 114 aa5.83□□□□□ -1.48
CDC27-201ENST00000066544 GYPEP15421 78 aa5.83□□□□□ -1.48
CDC27-201ENST00000066544 FHL2Q14192 279 aa5.83□□□□□ -1.48
CDC27-201ENST00000066544 CRPP02741 224 aa5.82□□□□□ -1.48
CDC27-201ENST00000066544 CSDC2Q9Y534 153 aaKnown RBP5.82□□□□□ -1.48
CDC27-201ENST00000066544 TRBV6-8A0A0A6YYG3 113 aa5.82□□□□□ -1.48
CDC27-201ENST00000066544 PAX4O43316 350 aa5.82□□□□□ -1.48
CDC27-201ENST00000066544 ATP5G1P05496 136 aa5.82□□□□□ -1.48
CDC27-201ENST00000066544 OTOGQ6ZRI0 2925 aa5.82□□□□□ -1.48
CDC27-201ENST00000066544 BAALC-AS2P0C853 105 aa5.82□□□□□ -1.48
CDC27-201ENST00000066544 KRTAP1-1Q07627 177 aa5.82□□□□□ -1.48
CDC27-201ENST00000066544 LINC00337Q8N6G1 96 aa5.82□□□□□ -1.48
CDC27-201ENST00000066544 IGLV10-54A0A075B6I4 117 aa5.82□□□□□ -1.48
CDC27-201ENST00000066544 CITED1Q99966 193 aa5.82□□□□□ -1.48
CDC27-201ENST00000066544 TRBV6-4A0A1B0GX49 114 aa5.81□□□□□ -1.48
CDC27-201ENST00000066544 B5MCH6 92 aa5.81□□□□□ -1.48
CDC27-201ENST00000066544 C6orf226Q5I0X4 101 aa5.81□□□□□ -1.48
CDC27-201ENST00000066544 SPATA3Q8NHX4 192 aa5.81□□□□□ -1.48
CDC27-201ENST00000066544 FLNBO75369 2602 aaKnown RBP5.81□□□□□ -1.48
CDC27-201ENST00000066544 CSNK1G2-AS1Q8NCQ2 148 aa5.81□□□□□ -1.48
CDC27-201ENST00000066544 HTN3P15516 51 aa5.8□□□□□ -1.48
CDC27-201ENST00000066544 Q8N3U1 123 aa5.8□□□□□ -1.48
CDC27-201ENST00000066544 M0QXV9 152 aa5.8□□□□□ -1.48
CDC27-201ENST00000066544 RNASE1P07998 156 aaKnown RBP5.8□□□□□ -1.48
CDC27-201ENST00000066544 HERV-K104P63124 156 aa5.8□□□□□ -1.48
CDC27-201ENST00000066544 C3orf56Q8N813 242 aa5.8□□□□□ -1.48
CDC27-201ENST00000066544 CCL18P55774 89 aa5.8□□□□□ -1.48
CDC27-201ENST00000066544 NDUFV3P56181 108 aaKnown RBP5.8□□□□□ -1.48
CDC27-201ENST00000066544 SHISA2Q6UWI4 295 aa5.8□□□□□ -1.48
CDC27-201ENST00000066544 IGHV3OR16-9A0A0B4J2B5 98 aa5.8□□□□□ -1.48
CDC27-201ENST00000066544 SS18L2Q9UHA2 77 aa5.79□□□□□ -1.48
CDC27-201ENST00000066544 NHLRC4P0CG21 123 aaPredicted RBP5.79□□□□□ -1.48
CDC27-201ENST00000066544 DEFB135Q30KP9 77 aa5.79□□□□□ -1.48
CDC27-201ENST00000066544 COPS9Q8WXC6 57 aa5.79□□□□□ -1.48
CDC27-201ENST00000066544 IGKV2-28A0A075B6P5 120 aa5.79□□□□□ -1.48
CDC27-201ENST00000066544 IGKV2D-28P01615 120 aa5.79□□□□□ -1.48
CDC27-201ENST00000066544 SLPIP03973 132 aa5.79□□□□□ -1.48
CDC27-201ENST00000066544 PRR3P79522 188 aaKnown RBP5.79□□□□□ -1.48
CDC27-201ENST00000066544 GAGE2AQ6NT46 116 aa5.79□□□□□ -1.48
CDC27-201ENST00000066544 CMC4P56277 68 aaPredicted RBP5.79□□□□□ -1.48
CDC27-201ENST00000066544 LINC00959A0A1B0GUT2 108 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms