RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Siglec12Q91Y57 467 aa10.16□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Egln1Q91YE3 400 aa10.16□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Slamf6Q9ET39 351 aa10.16□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Abca2P41234 2434 aa10.16□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Olfr143P34985 313 aa10.16□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Slc25a5P51881 298 aaKnown RBP10.16□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 P2ry6Q9ERK9 328 aa10.16□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Erg28Q9ERY9 140 aa10.16□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 P01638 115 aa10.16□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Vmn1r216Q8R257 298 aa10.16□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 P01723 117 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Tmem88bQ3TYP4 173 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Olfr873Q8VFJ0 319 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Prr15Q9D1T5 122 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Rnf125Q9D9R0 233 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Tarm1B6A8R8 288 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 P01654 111 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 P01656 111 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 P03977 111 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Pex7P97865 318 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Gng5Q80SZ7 68 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Ifi27Q8C6G0 260 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 HpxQ91X72 460 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Tmprss5Q9ER04 455 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Dolpp1Q9JMF7 238 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Adamts20P59511 1906 aa10.15□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Egr1P08046 533 aa10.15□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Gng4P50153 75 aa10.15□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Prrx2Q06348 247 aa10.15□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Tmem241Q3UME2 297 aa10.15□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Olfr1350Q8VF34 308 aa10.15□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Olfr1271Q8VG62 305 aa10.15□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Olfr982Q8VGB3 321 aa10.15□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 BmfQ91ZE9 185 aa10.15□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 ChodlQ9CXM0 273 aa10.15□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Znf22Q9ERU3 237 aa10.15□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Ighv1-26A0A075B5V0 117 aa10.14□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Dcaf10A2AKB9 566 aa10.14□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Olfr1189A2AV11 306 aa10.14□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Olfr1362Q5SZZ8 308 aa10.14□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Dctn5Q9QZB9 182 aa10.14□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Gm15080A2BI02 449 aa10.14□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Dnajc30P59041 219 aa10.14□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Smim19Q80ZU4 107 aa10.14□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Zfp874aQ8BX23 447 aa10.14□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Poldip2Q91VA6 368 aa10.14□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Igkv4-50A0A0B4J1J0 117 aa10.14□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Ighv1-76A0A0G2JFE9 117 aa10.14□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Q0VG49 157 aa10.14□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 9130019O22RikG3X941 543 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Foxg1Q60987 481 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Q9CR34 168 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Gm19410A0A140LJC7 2098 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Ighv1-34A0A075B5V2 117 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Gm45521A0A1B0GRK0 198 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Gm15056F6ZR08 88 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Rnase2bO35292 155 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Hint1P70349 126 aaKnown RBP10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Zglp1Q1WG82 266 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 AgerQ62151 402 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Plppr2Q8VCY8 343 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Olfr1184Q8VG86 311 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 PigpQ9JHG1 132 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Ighv1-36A0A0A6YXT2 117 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 H2al2bA9Z055 111 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Tmem52bQ0VBF2 186 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 RprmlQ3URD2 117 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Mzt1Q8BUR9 78 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Cox19Q8K0C8 92 aa10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Rbms1Q91W59 403 aaKnown RBP10.13□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 TectaO08523 2155 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Defa3P28310 93 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Defa10P50708 93 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Defa15P50713 93 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 NpyP57774 97 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Ppp1r3cQ7TMB3 317 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 TdhQ8K3F7 373 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Atxn7l1Q9CZ05 146 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Olfr978E9Q985 311 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Mpc1P63030 109 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Col9a1Q05722 921 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Gm11733Q8BQP1 125 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Gm20219A0A1B0GRQ3 87 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Sertad4A7DTG3 377 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Foxl1Q64731 336 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Rab9bQ8BHH2 201 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Aqp6Q8C4A0 293 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 C1qtnf5Q8K479 243 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Stac2Q8R1B0 408 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Tcf23Q9JLR5 209 aa10.12□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Trav8-1A0A075B641 109 aa10.11□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Gm26602M0QWA4 95 aa10.11□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 P01759 136 aa10.11□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 P01806 116 aa10.11□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Pate4Q09098 99 aa10.11□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Gm5150Q1AN92 299 aa10.11□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Harbi1Q8BR93 349 aa10.11□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Gm9944Q8C559 102 aa10.11□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Olfr1183Q8VFF8 303 aa10.11□□□□□ -0.79
Pcdh1-202ENSMUST00000159405 Tmed6Q9CQG0 239 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms