RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Hist3h2bbQ8CGP0 126 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Hist3h2baQ9D2U9 126 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Chd5A2A8L1 1946 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm21616B6ZB74 166 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Il3raP26952 396 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Foxg1Q60987 481 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Greb1lB9EJV3 1913 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm20219A0A1B0GRQ3 87 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Lhx2Q9Z0S2 406 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Thsd7aQ69ZU6 1645 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm13090A2A899 111 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 P01725 110 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Loxl2P58022 776 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Rpl36aP83882 106 aaKnown RBP7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Defb33Q30KN3 62 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 H2al1nQ497L1 109 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Dph3Q8K0W9 82 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Slc17a9Q8VCL5 447 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Mrpl36Q99N90 102 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm10521E9PZK0 135 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm10203F6QJ09 66 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Pde6hP61249 83 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 ApohQ01339 345 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Cd200r1lQ6XJV6 249 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 EpopQ7TNS8 369 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 LenepQ9WVB6 61 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 PappaQ8R4K8 1624 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 4931422A03RikA2BHN9 113 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Ly6lH3BJG9 140 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 C330021F23RikQ8C7T0 141 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Lyzl1Q9CPX3 148 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Znhit3Q9CQK1 151 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Pgpep1lQ9CWB5 130 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Lyzl4Q9D925 145 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 OtorQ9JIE3 128 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Dock10Q8BZN6 2150 aa7.61□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Prr19B2RW88 366 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Efna2P52801 209 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Defa26Q3L180 93 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Defb8Q91V82 60 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Cysltr1Q99JA4 352 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Ms4a8Q99N10 290 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Ptprz1B9EKR1 2312 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Znf431E9QAG8 526 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 1700067P10RikG3X8U2 183 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Il2raP01590 268 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 SlaQ60898 281 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Znhit1Q8R331 154 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Prss28Q924N9 274 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Pnrc2Q9CR73 140 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Ighv14-1A0A075B5R4 117 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Trdv5A0A075B661 115 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Pax1P09084 446 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Mst1P26928 716 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Mllt11P97783 90 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Igfbpl1Q80W15 270 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Dock8Q8C147 2100 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Ifi27l2aQ8R412 90 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 CenpvQ9CXS4 252 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Ssbp2Q9CYZ8 361 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Qrich2A0A140LIY9 2337 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Akap6E9Q9K8 2307 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm35549A0A0N4SUS7 141 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 P01802 115 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Wnt2P21552 360 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Tmem86bQ497J1 226 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 MycbQ6P8Z1 170 aa7.6□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 CrygsO35486 178 aa7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 F11rO88792 300 aa7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 P03985 172 aa7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Defa2P28309 93 aa7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Cep250Q60952 2414 aa7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Iglv3A0A0B4J1K5 122 aa7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Igkv14-130A0A0G2JF45 117 aa7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Dkk1O54908 272 aa7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 P18532 116 aa7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm10775Q3V290 127 aa7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Isg15Q64339 161 aaKnown RBP7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 TcraP01849 138 aa7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Cox6b1P56391 86 aaKnown RBP7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Klf14Q19A41 325 aa7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Crybb3Q9JJU9 211 aa7.59□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm29289A0A087WPY7 166 aa7.59□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Defa-rs7P50715 91 aa7.59□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Rnase6Q9D244 153 aa7.59□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Dock2Q8C3J5 1828 aa7.59□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Samd13D3YUG0 102 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Cks1bP61025 79 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ros1Q78DX7 2340 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Tex36Q9D5N9 219 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Q9D8L0 127 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 P01736 120 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 AgerQ62151 402 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Gtsf1lQ9CWD0 151 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Pygo1Q9D0P5 417 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 PoleQ9WVF7 2283 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Trav21-dv12A0A075B6C4 109 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Gm16381A0A1Y7VKT9 73 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ccl3P10855 92 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Cd69P37217 199 aa7.58□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms