RNA–Protein interactions for RNA: ENST00000641471.1

PPT1-215, Transcript of palmitoyl-protein thioesterase 1, human

BASIC

Gene PPT1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPT1-215	ENST00000641471	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.35	□□□□□ -0.59
PPT1-215	ENST00000641471	SCGB1C2	P0DMR2	95 aa		11.35	□□□□□ -0.59
PPT1-215	ENST00000641471	ERG28	Q9UKR5	140 aa		11.35	□□□□□ -0.59
PPT1-215	ENST00000641471		H7C2G1	150 aa		11.35	□□□□□ -0.59
PPT1-215	ENST00000641471		Q6ZTI0	123 aa		11.35	□□□□□ -0.59
PPT1-215	ENST00000641471	SPANXD	Q9BXN6	97 aa		11.35	□□□□□ -0.59
PPT1-215	ENST00000641471	SPANXC	Q9NY87	97 aa		11.35	□□□□□ -0.59
PPT1-215	ENST00000641471	CDKN2A-AS1	Q9UH64	79 aa		11.35	□□□□□ -0.59
PPT1-215	ENST00000641471	IGLV5-45	A0A087WSX0	123 aa		11.34	□□□□□ -0.59
PPT1-215	ENST00000641471	ZFAND6	Q6FIF0	208 aa		11.34	□□□□□ -0.59
PPT1-215	ENST00000641471	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.34	□□□□□ -0.59
PPT1-215	ENST00000641471	SIGMAR1	Q99720	223 aa		11.34	□□□□□ -0.59
PPT1-215	ENST00000641471	GEMIN7	Q9H840	131 aa	Known RBP	11.34	□□□□□ -0.59
PPT1-215	ENST00000641471	KRTAP1-1	Q07627	177 aa		11.34	□□□□□ -0.59
PPT1-215	ENST00000641471	TENM4	Q6N022	2769 aa		11.34	□□□□□ -0.59
PPT1-215	ENST00000641471	TIRAP	P58753	221 aa		11.33	□□□□□ -0.6
PPT1-215	ENST00000641471	ACAN	P16112	2415 aa		11.33	□□□□□ -0.6
PPT1-215	ENST00000641471		K7EQD1	137 aa		11.33	□□□□□ -0.6
PPT1-215	ENST00000641471	LINC00694	P0DN24	101 aa		11.33	□□□□□ -0.6
PPT1-215	ENST00000641471	TEN1	Q86WV5	123 aa		11.33	□□□□□ -0.6
PPT1-215	ENST00000641471	CARD19	Q96LW7	228 aa		11.33	□□□□□ -0.6
PPT1-215	ENST00000641471	GIG44	P09565	113 aa	Predicted RBP	11.32	□□□□□ -0.6
PPT1-215	ENST00000641471	COX6A2	Q02221	97 aa		11.32	□□□□□ -0.6
PPT1-215	ENST00000641471	MIA	Q16674	131 aa		11.32	□□□□□ -0.6
PPT1-215	ENST00000641471	PDZD2	O15018	2839 aa		11.32	□□□□□ -0.6
PPT1-215	ENST00000641471	DGAT2L7P	Q6IED9	249 aa		11.32	□□□□□ -0.6
PPT1-215	ENST00000641471	LINC01006	Q8NI28	216 aa		11.32	□□□□□ -0.6
PPT1-215	ENST00000641471	TRAV4	A0A0B4J268	109 aa		11.31	□□□□□ -0.6
PPT1-215	ENST00000641471	PRSS2	P07478	247 aa		11.31	□□□□□ -0.6
PPT1-215	ENST00000641471		Q1RN00	199 aa		11.31	□□□□□ -0.6
PPT1-215	ENST00000641471	NTM-AS1	Q6ZSK4	140 aa		11.31	□□□□□ -0.6
PPT1-215	ENST00000641471	WFDC10A	Q9H1F0	79 aa		11.31	□□□□□ -0.6
PPT1-215	ENST00000641471	NPC2	P61916	151 aa		11.31	□□□□□ -0.6
PPT1-215	ENST00000641471	TMEM101	Q96IK0	257 aa		11.31	□□□□□ -0.6
PPT1-215	ENST00000641471	TRBV10-1	A0A0K0K1A3	114 aa		11.3	□□□□□ -0.6
PPT1-215	ENST00000641471	RPL36A	P83881	106 aa	Known RBP	11.3	□□□□□ -0.6
PPT1-215	ENST00000641471	SMAGP	Q0VAQ4	97 aa		11.3	□□□□□ -0.6
PPT1-215	ENST00000641471	ANKRD29	Q8N6D5	301 aa		11.3	□□□□□ -0.6
PPT1-215	ENST00000641471	PPDPFL	Q8WWR9	84 aa		11.3	□□□□□ -0.6
PPT1-215	ENST00000641471	RPL36AL	Q969Q0	106 aa	Known RBP	11.3	□□□□□ -0.6
PPT1-215	ENST00000641471	NIPBL	Q6KC79	2804 aa	eCLIP	11.3	□□□□□ -0.6
PPT1-215	ENST00000641471	LINC00242	Q5T6M2	205 aa		11.3	□□□□□ -0.6
PPT1-215	ENST00000641471	MTOR	P42345	2549 aa		11.29	□□□□□ -0.6
PPT1-215	ENST00000641471	NDUFA1	O15239	70 aa		11.29	□□□□□ -0.6
PPT1-215	ENST00000641471	NDUFA7	O95182	113 aa		11.29	□□□□□ -0.6
PPT1-215	ENST00000641471	C16orf95	Q9H693	158 aa		11.29	□□□□□ -0.6
PPT1-215	ENST00000641471	NOP10	Q9NPE3	64 aa	Known RBP	11.29	□□□□□ -0.6
PPT1-215	ENST00000641471	PLAC8L1	A1L4L8	177 aa		11.28	□□□□□ -0.6
PPT1-215	ENST00000641471	TRIAP1	O43715	76 aa		11.28	□□□□□ -0.6
PPT1-215	ENST00000641471	RNASE1	P07998	156 aa	Known RBP	11.28	□□□□□ -0.6
PPT1-215	ENST00000641471	TRBV30	A0A0K0K1B3	111 aa		11.28	□□□□□ -0.6
PPT1-215	ENST00000641471	GAGE12J	A6NER3	117 aa		11.28	□□□□□ -0.6
PPT1-215	ENST00000641471		C9JAW5	83 aa		11.28	□□□□□ -0.6
PPT1-215	ENST00000641471	SLC25A20	O43772	301 aa		11.28	□□□□□ -0.6
PPT1-215	ENST00000641471	TIMM17B	O60830	172 aa		11.28	□□□□□ -0.6
PPT1-215	ENST00000641471	GAGE4	Q13068	117 aa		11.28	□□□□□ -0.6
PPT1-215	ENST00000641471	GAGE5	Q13069	117 aa		11.28	□□□□□ -0.6
PPT1-215	ENST00000641471	FAM19A3	Q7Z5A8	133 aa		11.28	□□□□□ -0.6
PPT1-215	ENST00000641471	CDIP1	Q9H305	208 aa		11.28	□□□□□ -0.6
PPT1-215	ENST00000641471	IGLV5-39	A0A0G2JS06	123 aa		11.27	□□□□□ -0.6
PPT1-215	ENST00000641471	HERVK_113	P63121	156 aa		11.27	□□□□□ -0.6
PPT1-215	ENST00000641471	DAZ2	Q13117	558 aa	Known RBP	11.27	□□□□□ -0.6
PPT1-215	ENST00000641471	DAZ4	Q86SG3	579 aa	Known RBP	11.27	□□□□□ -0.6
PPT1-215	ENST00000641471	DAZ3	Q9NR90	486 aa	Known RBP	11.27	□□□□□ -0.6
PPT1-215	ENST00000641471	YAE1D1	Q9NRH1	226 aa		11.27	□□□□□ -0.6
PPT1-215	ENST00000641471	C19orf73	Q9NVV2	129 aa		11.27	□□□□□ -0.6
PPT1-215	ENST00000641471	C2CD3	Q4AC94	2353 aa		11.27	□□□□□ -0.61
PPT1-215	ENST00000641471	SCGB1A1	P11684	91 aa		11.27	□□□□□ -0.61
PPT1-215	ENST00000641471	DAND5	Q8N907	189 aa		11.27	□□□□□ -0.61
PPT1-215	ENST00000641471	CSDC2	Q9Y534	153 aa	Known RBP	11.26	□□□□□ -0.61
PPT1-215	ENST00000641471		M0QXV9	152 aa		11.26	□□□□□ -0.61
PPT1-215	ENST00000641471	IGLV1-51	P01701	117 aa		11.26	□□□□□ -0.61
PPT1-215	ENST00000641471	RPL35A	P18077	110 aa	Known RBP	11.26	□□□□□ -0.61
PPT1-215	ENST00000641471	ICOS	Q9Y6W8	199 aa		11.26	□□□□□ -0.61
PPT1-215	ENST00000641471	ATXN8	Q156A1	80 aa		11.25	□□□□□ -0.61
PPT1-215	ENST00000641471	SMIM1	B2RUZ4	78 aa		11.25	□□□□□ -0.61
PPT1-215	ENST00000641471	CMC4	P56277	68 aa	Predicted RBP	11.25	□□□□□ -0.61
PPT1-215	ENST00000641471	LINC01620	Q4KN68	170 aa		11.25	□□□□□ -0.61
PPT1-215	ENST00000641471	RNF183	Q96D59	192 aa		11.25	□□□□□ -0.61
PPT1-215	ENST00000641471	C16orf74	Q96GX8	76 aa		11.25	□□□□□ -0.61
PPT1-215	ENST00000641471	TRAV13-1	A0A0B4J241	112 aa		11.24	□□□□□ -0.61
PPT1-215	ENST00000641471		Q9H8V8	135 aa		11.24	□□□□□ -0.61
PPT1-215	ENST00000641471	CDC42SE2	Q9NRR3	84 aa		11.24	□□□□□ -0.61
PPT1-215	ENST00000641471	GAGE7	O76087	117 aa		11.24	□□□□□ -0.61
PPT1-215	ENST00000641471	GAGE12F	P0CL80	117 aa		11.24	□□□□□ -0.61
PPT1-215	ENST00000641471	GAGE12G	P0CL81	117 aa		11.24	□□□□□ -0.61
PPT1-215	ENST00000641471	GAGE12I	P0CL82	117 aa		11.24	□□□□□ -0.61
PPT1-215	ENST00000641471	IFITM1	P13164	125 aa		11.24	□□□□□ -0.61
PPT1-215	ENST00000641471	CSNK1G2-AS1	Q8NCQ2	148 aa		11.24	□□□□□ -0.61
PPT1-215	ENST00000641471	ITPR2	Q14571	2701 aa		11.23	□□□□□ -0.61
PPT1-215	ENST00000641471	LOC100131303	A0A0U1RQF7	123 aa		11.23	□□□□□ -0.61
PPT1-215	ENST00000641471	FAM110A	Q9BQ89	295 aa		11.23	□□□□□ -0.61
PPT1-215	ENST00000641471		F5H768	121 aa		11.22	□□□□□ -0.61
PPT1-215	ENST00000641471	TRGV2	A0A075B6R0	118 aa		11.21	□□□□□ -0.62
PPT1-215	ENST00000641471	PLA2G2A	P14555	144 aa		11.21	□□□□□ -0.62
PPT1-215	ENST00000641471	RPL13A	P40429	203 aa	Known RBP	11.21	□□□□□ -0.62
PPT1-215	ENST00000641471	ZNF625	Q96I27	306 aa	Predicted RBP	11.21	□□□□□ -0.62
PPT1-215	ENST00000641471	LINC00308	Q8TCZ7	52 aa		11.2	□□□□□ -0.62
PPT1-215	ENST00000641471	LINC01600	Q96MT4	127 aa		11.2	□□□□□ -0.62
PPT1-215	ENST00000641471	OVOL2	Q9BRP0	275 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms