RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 B4DSR2 109 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 HCRTO43612 131 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 HMGN2P05204 90 aaKnown RBP0.94□□□□□ -2.26
CCDC7-216ENST00000640058 ELOF1P60002 83 aaKnown RBP0.94□□□□□ -2.26
CCDC7-216ENST00000640058 SSBP1Q04837 148 aaKnown RBP0.94□□□□□ -2.26
CCDC7-216ENST00000640058 DEFB113Q30KQ7 82 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 FAM74A4Q5TZK3 123 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 CFAP126Q5VTH2 177 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 LYPD5Q6UWN5 251 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.94□□□□□ -2.26
CCDC7-216ENST00000640058 ZNF833PQ6ZTB9 187 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 VMO1Q7Z5L0 202 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 Q8TAT8 98 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 IFI27L1Q96BM0 104 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 MRPL36Q9P0J6 103 aaKnown RBP0.94□□□□□ -2.26
CCDC7-216ENST00000640058 HIGD1BQ9P298 99 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 LINC00474Q9P2X8 69 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 V9GYH0 126 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 ABCA8O94911 1581 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 MYO5CQ9NQX4 1742 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 TANC1Q9C0D5 1861 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 PPRC1Q5VV67 1664 aaKnown RBP0.94□□□□□ -2.26
CCDC7-216ENST00000640058 PATJQ8NI35 1801 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 IQGAP3Q86VI3 1631 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 FANCD2Q9BXW9 1451 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 SHANK2Q9UPX8 1470 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 PLXNA1Q9UIW2 1896 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 TRAV22A0A0B4J277 110 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 MYMXA0A1B0GTQ4 84 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 CXorf51AA0A1B0GTR3 108 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 C2orf70A6NJV1 201 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 TMEM14DPA8MWL7 114 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 D6R8Y8 96 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 H3BVH4 76 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 H7BZZ5 65 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 FXYD1O00168 92 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 LEPROTL1O95214 131 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 IGHV3-33P01772 117 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 TFF1P04155 84 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 SAA2P0DJI9 122 aaPredicted RBP0.93□□□□□ -2.26
CCDC7-216ENST00000640058 UBE2D3P61077 147 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 UBE2D2P62837 147 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 PLGLAQ15195 96 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 C1orf137Q5JT78 98 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 ATP5EP2Q5VTU8 51 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 XAF1Q6GPH4 301 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 SFTA2Q6UW10 78 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 BAGE3Q86Y29 109 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 BAGE2Q86Y30 109 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 MUSTN1Q8IVN3 82 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 C20orf197Q8N268 126 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 LINC01600Q96MT4 127 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 ODF3Q96PU9 254 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 LENEPQ9Y5L5 61 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 R4GMQ9 66 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 ARL2-SNX15V9GYD0 113 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 LMTK2Q8IWU2 1503 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 SYCP2Q9BX26 1530 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 LRP5O75197 1615 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 TOP2BQ02880 1626 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 ABCA9Q8IUA7 1624 aa0.93□□□□□ -2.26
CCDC7-216ENST00000640058 PLXNA2O75051 1894 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 COL24A1Q17RW2 1714 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 KIAA1549LQ6ZVL6 1849 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 TET3O43151 1660 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 CEP192Q8TEP8 1941 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 IGLV3-32A0A0A0MS00 114 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 TRBV6-8A0A0A6YYG3 113 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 TEX49A0A1B0GTD5 131 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 NUPR2A6NF83 97 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 IQCF6A8MYZ5 107 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 F8WEM9 126 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 PPP1R17O96001 155 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 COX8AP10176 69 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 GCHFRP30047 84 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 UBE2D1P51668 147 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 SPAG11BQ08648 103 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 PDE6HQ13956 83 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 CSAG1Q6PB30 78 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 SPAG11AQ6PDA7 123 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 FAM223AQ8IWN6 122 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 AMELXQ99217 191 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 KLK9Q9UKQ9 250 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 ITSN1Q15811 1721 aa0.92□□□□□ -2.26
CCDC7-216ENST00000640058 MYO18AQ92614 2054 aaKnown RBP0.92□□□□□ -2.26
CCDC7-216ENST00000640058 PLXNC1O60486 1568 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 PTPRFP10586 1907 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 LAMB1P07942 1786 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 TRPM7Q96QT4 1865 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 MADDQ8WXG6 1647 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 FXYD6-FXYD2A0A087WZ82 144 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 TRBV6-7A0A0A0MS04 114 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 A0A0J9YY99 117 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 SNRPGP15A8MWD9 76 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 JMJD7-PLA2G4BH0Y9G9 81 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 HMGN4O00479 90 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 PPYP01298 95 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 ARMS2P0C7Q2 107 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 IL9P15248 144 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 IFI27P40305 119 aaPredicted RBP0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms