RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 OR2D3Q8NGH3 330 aa6.3□□□□□ -1.4
PTP4A1-207ENST00000639568 ANAPC11Q9NYG5 84 aa6.3□□□□□ -1.4
PTP4A1-207ENST00000639568 FAM74A7A6NL05 159 aa6.29□□□□□ -1.4
PTP4A1-207ENST00000639568 NUPR1O60356 82 aa6.29□□□□□ -1.4
PTP4A1-207ENST00000639568 SPAG11BQ08648 103 aa6.29□□□□□ -1.4
PTP4A1-207ENST00000639568 MRPL35Q9NZE8 188 aaKnown RBP6.29□□□□□ -1.4
PTP4A1-207ENST00000639568 SCO2A0A1W2PP80 73 aa6.28□□□□□ -1.4
PTP4A1-207ENST00000639568 C1orf196B1AJZ1 125 aa6.28□□□□□ -1.4
PTP4A1-207ENST00000639568 LYRM1O43325 122 aa6.28□□□□□ -1.4
PTP4A1-207ENST00000639568 IL7P13232 177 aa6.28□□□□□ -1.4
PTP4A1-207ENST00000639568 ATP6V0CP27449 155 aa6.28□□□□□ -1.4
PTP4A1-207ENST00000639568 AKR1C3P42330 323 aa6.28□□□□□ -1.4
PTP4A1-207ENST00000639568 FP248Q71RG6 208 aaPredicted RBP6.28□□□□□ -1.4
PTP4A1-207ENST00000639568 STOML3Q8TAV4 291 aa6.28□□□□□ -1.4
PTP4A1-207ENST00000639568 PPP1R1CQ8WVI7 109 aa6.28□□□□□ -1.4
PTP4A1-207ENST00000639568 CTDSP1Q9GZU7 261 aa6.28□□□□□ -1.4
PTP4A1-207ENST00000639568 IGKV2D-26A0A0A0MRZ7 120 aa6.27□□□□□ -1.41
PTP4A1-207ENST00000639568 G3V3Q6 166 aa6.27□□□□□ -1.41
PTP4A1-207ENST00000639568 M0R2T5 61 aa6.27□□□□□ -1.41
PTP4A1-207ENST00000639568 TRGC1P0CF51 173 aa6.27□□□□□ -1.41
PTP4A1-207ENST00000639568 SERF2P84101 59 aa6.27□□□□□ -1.41
PTP4A1-207ENST00000639568 TMEM241Q24JQ0 296 aa6.27□□□□□ -1.41
PTP4A1-207ENST00000639568 KRTAP13-2Q52LG2 175 aa6.27□□□□□ -1.41
PTP4A1-207ENST00000639568 CCDC160A6NGH7 325 aa6.26□□□□□ -1.41
PTP4A1-207ENST00000639568 NDUFA1O15239 70 aa6.26□□□□□ -1.41
PTP4A1-207ENST00000639568 PLA2G10O15496 165 aa6.26□□□□□ -1.41
PTP4A1-207ENST00000639568 TLX1NBP0CAT3 122 aa6.26□□□□□ -1.41
PTP4A1-207ENST00000639568 KRTAP13-3Q3SY46 172 aa6.26□□□□□ -1.41
PTP4A1-207ENST00000639568 C5orf38Q86SI9 138 aa6.26□□□□□ -1.41
PTP4A1-207ENST00000639568 KRTAP7-1Q8IUC3 87 aa6.26□□□□□ -1.41
PTP4A1-207ENST00000639568 TCEAL7Q9BRU2 100 aa6.26□□□□□ -1.41
PTP4A1-207ENST00000639568 PSMG3Q9BT73 122 aaPredicted RBP6.26□□□□□ -1.41
PTP4A1-207ENST00000639568 CDC42SE2Q9NRR3 84 aa6.26□□□□□ -1.41
PTP4A1-207ENST00000639568 TNFSF18Q9UNG2 199 aa6.26□□□□□ -1.41
PTP4A1-207ENST00000639568 ALG5Q9Y673 324 aa6.26□□□□□ -1.41
PTP4A1-207ENST00000639568 A0A1B0GVG6 124 aa6.25□□□□□ -1.41
PTP4A1-207ENST00000639568 F8WDY8 70 aa6.25□□□□□ -1.41
PTP4A1-207ENST00000639568 MPC2O95563 127 aa6.25□□□□□ -1.41
PTP4A1-207ENST00000639568 CST9LP1Q5W188 147 aa6.25□□□□□ -1.41
PTP4A1-207ENST00000639568 OR10D4PQ8NGN7 298 aa6.25□□□□□ -1.41
PTP4A1-207ENST00000639568 SMDT1Q9H4I9 107 aa6.25□□□□□ -1.41
PTP4A1-207ENST00000639568 S100A9P06702 114 aaKnown RBP6.24□□□□□ -1.41
PTP4A1-207ENST00000639568 PMCHP20382 165 aa6.24□□□□□ -1.41
PTP4A1-207ENST00000639568 BAGE2Q86Y30 109 aa6.24□□□□□ -1.41
PTP4A1-207ENST00000639568 MRAP2Q96G30 205 aa6.24□□□□□ -1.41
PTP4A1-207ENST00000639568 CCDC32Q9BV29 185 aa6.24□□□□□ -1.41
PTP4A1-207ENST00000639568 FAM229BQ4G0N7 80 aa6.23□□□□□ -1.41
PTP4A1-207ENST00000639568 LBHQ53QV2 105 aaPredicted RBP6.23□□□□□ -1.41
PTP4A1-207ENST00000639568 GATD1Q8NB37 220 aa6.23□□□□□ -1.41
PTP4A1-207ENST00000639568 ORAOV1Q8WV07 137 aa6.23□□□□□ -1.41
PTP4A1-207ENST00000639568 TRAV13-1A0A0B4J241 112 aa6.22□□□□□ -1.41
PTP4A1-207ENST00000639568 CTXND1A0A1B0GTU2 59 aa6.22□□□□□ -1.41
PTP4A1-207ENST00000639568 FAM240BA0A1B0GVZ2 78 aa6.22□□□□□ -1.41
PTP4A1-207ENST00000639568 SDHAF1A6NFY7 115 aa6.22□□□□□ -1.41
PTP4A1-207ENST00000639568 F2Z2F3 143 aa6.22□□□□□ -1.41
PTP4A1-207ENST00000639568 INMT-MINDY4F8WBC2 141 aa6.22□□□□□ -1.41
PTP4A1-207ENST00000639568 I3L3M4 83 aa6.22□□□□□ -1.41
PTP4A1-207ENST00000639568 BCE1O60756 84 aa6.22□□□□□ -1.41
PTP4A1-207ENST00000639568 IGLC6P0CF74 106 aa6.22□□□□□ -1.41
PTP4A1-207ENST00000639568 H2BFSP57053 126 aa6.22□□□□□ -1.41
PTP4A1-207ENST00000639568 RPS20P60866 119 aaKnown RBP6.22□□□□□ -1.41
PTP4A1-207ENST00000639568 C10orf25Q5T742 122 aa6.22□□□□□ -1.41
PTP4A1-207ENST00000639568 MZT2BQ6NZ67 158 aa6.22□□□□□ -1.41
PTP4A1-207ENST00000639568 UNQ6190/PRO20217Q6UXQ8 127 aa6.22□□□□□ -1.41
PTP4A1-207ENST00000639568 FHITP49789 147 aa6.21□□□□□ -1.42
PTP4A1-207ENST00000639568 DEFA1P59665 94 aa6.21□□□□□ -1.42
PTP4A1-207ENST00000639568 ZNF726P1Q15940 193 aa6.21□□□□□ -1.42
PTP4A1-207ENST00000639568 LINC00242Q5T6M2 205 aa6.21□□□□□ -1.42
PTP4A1-207ENST00000639568 MRPL52Q86TS9 123 aaKnown RBP6.21□□□□□ -1.42
PTP4A1-207ENST00000639568 RPL39LQ96EH5 51 aaKnown RBP6.21□□□□□ -1.42
PTP4A1-207ENST00000639568 C6orf48Q9UBA6 75 aa6.21□□□□□ -1.42
PTP4A1-207ENST00000639568 XKRY2A2RUG3 117 aa6.2□□□□□ -1.42
PTP4A1-207ENST00000639568 CTRLP40313 264 aa6.2□□□□□ -1.42
PTP4A1-207ENST00000639568 KRTAP19-2Q3LHN2 52 aa6.2□□□□□ -1.42
PTP4A1-207ENST00000639568 UBE2D4Q9Y2X8 147 aa6.2□□□□□ -1.42
PTP4A1-207ENST00000639568 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
PTP4A1-207ENST00000639568 TWIST1Q15672 202 aa6.19□□□□□ -1.42
PTP4A1-207ENST00000639568 C9orf129Q5T035 196 aaKnown RBP6.19□□□□□ -1.42
PTP4A1-207ENST00000639568 SPAG11AQ6PDA7 123 aa6.19□□□□□ -1.42
PTP4A1-207ENST00000639568 TEX261Q6UWH6 196 aa6.19□□□□□ -1.42
PTP4A1-207ENST00000639568 LYZL1Q6UWQ5 148 aa6.19□□□□□ -1.42
PTP4A1-207ENST00000639568 CYTL1Q9NRR1 136 aa6.19□□□□□ -1.42
PTP4A1-207ENST00000639568 C22orf24Q9Y442 160 aa6.19□□□□□ -1.42
PTP4A1-207ENST00000639568 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
PTP4A1-207ENST00000639568 NDUFC2-KCTD14E9PQ53 114 aa6.18□□□□□ -1.42
PTP4A1-207ENST00000639568 SMAGPQ0VAQ4 97 aa6.18□□□□□ -1.42
PTP4A1-207ENST00000639568 USH2AO75445 5202 aa6.18□□□□□ -1.42
PTP4A1-207ENST00000639568 C7orf77A4D0Y5 90 aa6.17□□□□□ -1.42
PTP4A1-207ENST00000639568 UBE2AP49459 152 aa6.17□□□□□ -1.42
PTP4A1-207ENST00000639568 RNASE13Q5GAN3 156 aaKnown RBP6.17□□□□□ -1.42
PTP4A1-207ENST00000639568 SMIM15Q7Z3B0 74 aa6.17□□□□□ -1.42
PTP4A1-207ENST00000639568 FAM210AQ96ND0 272 aa6.17□□□□□ -1.42
PTP4A1-207ENST00000639568 TMEM242Q9NWH2 141 aa6.17□□□□□ -1.42
PTP4A1-207ENST00000639568 MAP1LC3B2A6NCE7 125 aa6.16□□□□□ -1.42
PTP4A1-207ENST00000639568 IFNA1P01562 189 aa6.16□□□□□ -1.42
PTP4A1-207ENST00000639568 AKR1C8PQ5T2L2 129 aa6.16□□□□□ -1.42
PTP4A1-207ENST00000639568 DAND5Q8N907 189 aa6.16□□□□□ -1.42
PTP4A1-207ENST00000639568 MAP1LC3BQ9GZQ8 125 aa6.16□□□□□ -1.42
PTP4A1-207ENST00000639568 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.42
PTP4A1-207ENST00000639568 TRBV30A0A0K0K1B3 111 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms