RNA–Protein interactions for RNA: ENST00000639456.1

CROCCP2-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 2,575 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-204ENST00000639456 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.9□□□□□ -0.34
CROCCP2-204ENST00000639456 NTN5Q8WTR8 489 aaPredicted RBP12.9□□□□□ -0.34
CROCCP2-204ENST00000639456 TINCRA0A1B0GVN0 87 aa12.89□□□□□ -0.35
CROCCP2-204ENST00000639456 CKS1BP61024 79 aa12.89□□□□□ -0.35
CROCCP2-204ENST00000639456 TRGV1A0A0A0MS02 117 aa12.89□□□□□ -0.35
CROCCP2-204ENST00000639456 LINC00694P0DN24 101 aa12.89□□□□□ -0.35
CROCCP2-204ENST00000639456 DGAT2L7PQ6IED9 249 aa12.89□□□□□ -0.35
CROCCP2-204ENST00000639456 EDA2RQ9HAV5 297 aa12.89□□□□□ -0.35
CROCCP2-204ENST00000639456 FN1P02751 2386 aaKnown RBP12.89□□□□□ -0.35
CROCCP2-204ENST00000639456 TEX49A0A1B0GTD5 131 aa12.88□□□□□ -0.35
CROCCP2-204ENST00000639456 A8MTW9 85 aa12.88□□□□□ -0.35
CROCCP2-204ENST00000639456 INSP01308 110 aa12.88□□□□□ -0.35
CROCCP2-204ENST00000639456 CRYBA4P53673 196 aa12.88□□□□□ -0.35
CROCCP2-204ENST00000639456 ODF3L2Q3SX64 289 aa12.88□□□□□ -0.35
CROCCP2-204ENST00000639456 C4orf3Q8WVX3 66 aa12.88□□□□□ -0.35
CROCCP2-204ENST00000639456 CLEC2BQ92478 149 aa12.88□□□□□ -0.35
CROCCP2-204ENST00000639456 LINC01620Q4KN68 170 aa12.87□□□□□ -0.35
CROCCP2-204ENST00000639456 SPANXA1Q9NS26 97 aa12.87□□□□□ -0.35
CROCCP2-204ENST00000639456 NBEAL2Q6ZNJ1 2754 aa12.86□□□□□ -0.35
CROCCP2-204ENST00000639456 ATXN8Q156A1 80 aa12.86□□□□□ -0.35
CROCCP2-204ENST00000639456 TMEM101Q96IK0 257 aa12.86□□□□□ -0.35
CROCCP2-204ENST00000639456 TRAV13-1A0A0B4J241 112 aa12.85□□□□□ -0.35
CROCCP2-204ENST00000639456 A0A1B0GV72 72 aa12.85□□□□□ -0.35
CROCCP2-204ENST00000639456 MIAQ16674 131 aa12.85□□□□□ -0.35
CROCCP2-204ENST00000639456 ICOSQ9Y6W8 199 aa12.85□□□□□ -0.35
CROCCP2-204ENST00000639456 CIDEAO60543 219 aa12.85□□□□□ -0.35
CROCCP2-204ENST00000639456 Q6ZTI0 123 aa12.85□□□□□ -0.35
CROCCP2-204ENST00000639456 STHQ8IWL8 128 aa12.85□□□□□ -0.35
CROCCP2-204ENST00000639456 C1orf158Q8N1D5 194 aa12.85□□□□□ -0.35
CROCCP2-204ENST00000639456 ZFAND6Q6FIF0 208 aa12.83□□□□□ -0.35
CROCCP2-204ENST00000639456 TRBV30A0A0K0K1B3 111 aa12.83□□□□□ -0.36
CROCCP2-204ENST00000639456 RS1O15537 224 aa12.83□□□□□ -0.36
CROCCP2-204ENST00000639456 DEFB113Q30KQ7 82 aa12.83□□□□□ -0.36
CROCCP2-204ENST00000639456 BEAN1Q3B7T3 259 aa12.83□□□□□ -0.36
CROCCP2-204ENST00000639456 Q8N2B8 174 aa12.83□□□□□ -0.36
CROCCP2-204ENST00000639456 SPANXDQ9BXN6 97 aa12.83□□□□□ -0.36
CROCCP2-204ENST00000639456 WFDC10AQ9H1F0 79 aa12.83□□□□□ -0.36
CROCCP2-204ENST00000639456 SPANXCQ9NY87 97 aa12.83□□□□□ -0.36
CROCCP2-204ENST00000639456 Q9H8V8 135 aa12.82□□□□□ -0.36
CROCCP2-204ENST00000639456 GCN1Q92616 2671 aaKnown RBP12.82□□□□□ -0.36
CROCCP2-204ENST00000639456 ITPR2Q14571 2701 aa12.82□□□□□ -0.36
CROCCP2-204ENST00000639456 RPL13AP40429 203 aaKnown RBP12.81□□□□□ -0.36
CROCCP2-204ENST00000639456 TENM4Q6N022 2769 aa12.81□□□□□ -0.36
CROCCP2-204ENST00000639456 GAGE12JA6NER3 117 aa12.81□□□□□ -0.36
CROCCP2-204ENST00000639456 PLA2G2AP14555 144 aa12.81□□□□□ -0.36
CROCCP2-204ENST00000639456 GAGE4Q13068 117 aa12.81□□□□□ -0.36
CROCCP2-204ENST00000639456 GAGE5Q13069 117 aa12.81□□□□□ -0.36
CROCCP2-204ENST00000639456 LINC00242Q5T6M2 205 aa12.81□□□□□ -0.36
CROCCP2-204ENST00000639456 NTM-AS1Q6ZSK4 140 aa12.81□□□□□ -0.36
CROCCP2-204ENST00000639456 H7C423 109 aa12.79□□□□□ -0.36
CROCCP2-204ENST00000639456 DNAJC30Q96LL9 226 aa12.79□□□□□ -0.36
CROCCP2-204ENST00000639456 NOP10Q9NPE3 64 aaKnown RBP12.79□□□□□ -0.36
CROCCP2-204ENST00000639456 PIK3CD-AS1Q5SR53 167 aa12.79□□□□□ -0.36
CROCCP2-204ENST00000639456 C2orf82Q6UX34 121 aa12.79□□□□□ -0.36
CROCCP2-204ENST00000639456 ZNF843Q8N446 348 aa12.79□□□□□ -0.36
CROCCP2-204ENST00000639456 CRLF1O75462 422 aa12.78□□□□□ -0.36
CROCCP2-204ENST00000639456 TRBV10-2A0A0K0K1G8 114 aa12.78□□□□□ -0.36
CROCCP2-204ENST00000639456 HIST2H2BCQ6DN03 193 aa12.78□□□□□ -0.36
CROCCP2-204ENST00000639456 LOC100131303A0A0U1RQF7 123 aa12.77□□□□□ -0.37
CROCCP2-204ENST00000639456 WFDC11Q8NEX6 87 aa12.77□□□□□ -0.37
CROCCP2-204ENST00000639456 CITED2Q99967 270 aaPredicted RBP12.77□□□□□ -0.37
CROCCP2-204ENST00000639456 DNAJC9-AS1A6NH13 148 aa12.76□□□□□ -0.37
CROCCP2-204ENST00000639456 CCL24O00175 119 aa12.76□□□□□ -0.37
CROCCP2-204ENST00000639456 ESM1Q9NQ30 184 aa12.76□□□□□ -0.37
CROCCP2-204ENST00000639456 TRAV26-1A0A087WT03 109 aa12.76□□□□□ -0.37
CROCCP2-204ENST00000639456 IGKV3OR2-268A0A0C4DH90 116 aa12.76□□□□□ -0.37
CROCCP2-204ENST00000639456 NDUFA1O15239 70 aa12.76□□□□□ -0.37
CROCCP2-204ENST00000639456 COX6CP09669 75 aa12.76□□□□□ -0.37
CROCCP2-204ENST00000639456 TIRAPP58753 221 aa12.76□□□□□ -0.37
CROCCP2-204ENST00000639456 RPL36AP83881 106 aaKnown RBP12.76□□□□□ -0.37
CROCCP2-204ENST00000639456 RPL36ALQ969Q0 106 aaKnown RBP12.76□□□□□ -0.37
CROCCP2-204ENST00000639456 TRAV4A0A0B4J268 109 aa12.75□□□□□ -0.37
CROCCP2-204ENST00000639456 SMIM1B2RUZ4 78 aa12.75□□□□□ -0.37
CROCCP2-204ENST00000639456 K7EQD1 137 aa12.75□□□□□ -0.37
CROCCP2-204ENST00000639456 SOSTDC1Q6X4U4 206 aa12.75□□□□□ -0.37
CROCCP2-204ENST00000639456 KRTAP1-3Q8IUG1 177 aa12.75□□□□□ -0.37
CROCCP2-204ENST00000639456 LINC00308Q8TCZ7 52 aa12.75□□□□□ -0.37
CROCCP2-204ENST00000639456 IGLV5-45A0A087WSX0 123 aa12.75□□□□□ -0.37
CROCCP2-204ENST00000639456 TMEM262E9PQX1 116 aa12.75□□□□□ -0.37
CROCCP2-204ENST00000639456 RPL35AP18077 110 aaKnown RBP12.75□□□□□ -0.37
CROCCP2-204ENST00000639456 UBE2WQ96B02 151 aa12.75□□□□□ -0.37
CROCCP2-204ENST00000639456 GAGE7O76087 117 aa12.74□□□□□ -0.37
CROCCP2-204ENST00000639456 GAGE12FP0CL80 117 aa12.74□□□□□ -0.37
CROCCP2-204ENST00000639456 GAGE12GP0CL81 117 aa12.74□□□□□ -0.37
CROCCP2-204ENST00000639456 GAGE12IP0CL82 117 aa12.74□□□□□ -0.37
CROCCP2-204ENST00000639456 HERVK_113P63121 156 aa12.74□□□□□ -0.37
CROCCP2-204ENST00000639456 MEIG1Q5JSS6 88 aa12.74□□□□□ -0.37
CROCCP2-204ENST00000639456 PRIMA1Q86XR5 153 aa12.74□□□□□ -0.37
CROCCP2-204ENST00000639456 RNF183Q96D59 192 aa12.73□□□□□ -0.37
CROCCP2-204ENST00000639456 YAE1D1Q9NRH1 226 aa12.73□□□□□ -0.37
CROCCP2-204ENST00000639456 CIRBPQ14011 172 aaKnown RBP12.73□□□□□ -0.37
CROCCP2-204ENST00000639456 IGLV5-39A0A0G2JS06 123 aa12.72□□□□□ -0.37
CROCCP2-204ENST00000639456 IL17DQ8TAD2 202 aa12.72□□□□□ -0.37
CROCCP2-204ENST00000639456 VWFP04275 2813 aa12.71□□□□□ -0.37
CROCCP2-204ENST00000639456 TRAV8-4A0A0B4J246 113 aa12.71□□□□□ -0.37
CROCCP2-204ENST00000639456 LST1O00453 97 aa12.71□□□□□ -0.37
CROCCP2-204ENST00000639456 TEX29Q8N6K0 151 aa12.71□□□□□ -0.37
CROCCP2-204ENST00000639456 TRGV2A0A075B6R0 118 aa12.71□□□□□ -0.38
CROCCP2-204ENST00000639456 M0QXV9 152 aa12.71□□□□□ -0.38
CROCCP2-204ENST00000639456 GIG44P09565 113 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms