RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 FAM222AQ5U5X8 452 aa11.71□□□□□ -0.54
HCG27-205ENST00000638546 RNF183Q96D59 192 aa11.71□□□□□ -0.54
HCG27-205ENST00000638546 NOTCH3Q9UM47 2321 aa11.7□□□□□ -0.54
HCG27-205ENST00000638546 TMEM223A0PJW6 202 aa11.7□□□□□ -0.54
HCG27-205ENST00000638546 MIFP14174 115 aa11.7□□□□□ -0.54
HCG27-205ENST00000638546 RNASE13Q5GAN3 156 aaKnown RBP11.7□□□□□ -0.54
HCG27-205ENST00000638546 LINC00694P0DN24 101 aa11.69□□□□□ -0.54
HCG27-205ENST00000638546 KRTAP10-11P60412 298 aa11.69□□□□□ -0.54
HCG27-205ENST00000638546 TMEM243Q9BU79 118 aa11.69□□□□□ -0.54
HCG27-205ENST00000638546 CSDC2Q9Y534 153 aaKnown RBP11.69□□□□□ -0.54
HCG27-205ENST00000638546 TINCRA0A1B0GVN0 87 aa11.68□□□□□ -0.54
HCG27-205ENST00000638546 ZNF815PA8K554 130 aa11.68□□□□□ -0.54
HCG27-205ENST00000638546 LEPROTO15243 131 aa11.68□□□□□ -0.54
HCG27-205ENST00000638546 EGFEM1PQ0D2K5 195 aa11.68□□□□□ -0.54
HCG27-205ENST00000638546 TAL2Q16559 108 aa11.68□□□□□ -0.54
HCG27-205ENST00000638546 H7C423 109 aa11.68□□□□□ -0.54
HCG27-205ENST00000638546 A6NDN8 102 aa11.67□□□□□ -0.54
HCG27-205ENST00000638546 UBE2L6O14933 153 aa11.67□□□□□ -0.54
HCG27-205ENST00000638546 Q8NAQ8 132 aa11.67□□□□□ -0.54
HCG27-205ENST00000638546 COX11Q9Y6N1 276 aa11.67□□□□□ -0.54
HCG27-205ENST00000638546 TAX1BP3O14907 124 aa11.66□□□□□ -0.54
HCG27-205ENST00000638546 DEFB4AO15263 64 aa11.66□□□□□ -0.54
HCG27-205ENST00000638546 UBE2D1P51668 147 aa11.66□□□□□ -0.54
HCG27-205ENST00000638546 PLEKHB2Q96CS7 222 aa11.66□□□□□ -0.54
HCG27-205ENST00000638546 PRO0255Q9UI72 69 aa11.66□□□□□ -0.54
HCG27-205ENST00000638546 STAB1Q9NY15 2570 aa11.66□□□□□ -0.54
HCG27-205ENST00000638546 A8MZ25 164 aa11.65□□□□□ -0.54
HCG27-205ENST00000638546 J3QQQ9 107 aa11.65□□□□□ -0.54
HCG27-205ENST00000638546 LGALS3P17931 250 aaKnown RBP11.65□□□□□ -0.54
HCG27-205ENST00000638546 GCSHP23434 173 aa11.65□□□□□ -0.54
HCG27-205ENST00000638546 AMMECR1LQ6DCA0 310 aa11.65□□□□□ -0.54
HCG27-205ENST00000638546 OR5A1Q8NGJ0 315 aa11.65□□□□□ -0.54
HCG27-205ENST00000638546 TMEM101Q96IK0 257 aa11.65□□□□□ -0.54
HCG27-205ENST00000638546 GYPEP15421 78 aa11.64□□□□□ -0.55
HCG27-205ENST00000638546 TIRAPP58753 221 aa11.64□□□□□ -0.55
HCG27-205ENST00000638546 TSPEAR-AS2P59090 65 aa11.64□□□□□ -0.55
HCG27-205ENST00000638546 DAD1P61803 113 aa11.64□□□□□ -0.55
HCG27-205ENST00000638546 CEND1Q8N111 149 aa11.64□□□□□ -0.55
HCG27-205ENST00000638546 TM2D2Q9BX73 214 aa11.64□□□□□ -0.55
HCG27-205ENST00000638546 TRBV6-8A0A0A6YYG3 113 aa11.64□□□□□ -0.55
HCG27-205ENST00000638546 SPART-AS1P0CW21 52 aa11.64□□□□□ -0.55
HCG27-205ENST00000638546 SCGB1D4Q6XE38 83 aa11.64□□□□□ -0.55
HCG27-205ENST00000638546 Q6ZVH6 145 aa11.64□□□□□ -0.55
HCG27-205ENST00000638546 HIST1H4GQ99525 98 aa11.64□□□□□ -0.55
HCG27-205ENST00000638546 GEMIN7Q9H840 131 aaKnown RBP11.64□□□□□ -0.55
HCG27-205ENST00000638546 CDC42SE2Q9NRR3 84 aa11.64□□□□□ -0.55
HCG27-205ENST00000638546 ATP6V0E2Q8NHE4 81 aa11.63□□□□□ -0.55
HCG27-205ENST00000638546 H3BRM9 83 aa11.62□□□□□ -0.55
HCG27-205ENST00000638546 PAX4O43316 350 aa11.62□□□□□ -0.55
HCG27-205ENST00000638546 FAM19A3Q7Z5A8 133 aa11.62□□□□□ -0.55
HCG27-205ENST00000638546 LINC00469Q8N7U9 141 aa11.62□□□□□ -0.55
HCG27-205ENST00000638546 PTTG1IPP53801 180 aa11.61□□□□□ -0.55
HCG27-205ENST00000638546 FXYD2P54710 66 aa11.61□□□□□ -0.55
HCG27-205ENST00000638546 IGHV3-64A0A075B6Q5 118 aa11.6□□□□□ -0.55
HCG27-205ENST00000638546 IGLV5-45A0A087WSX0 123 aa11.6□□□□□ -0.55
HCG27-205ENST00000638546 ATP5G1P05496 136 aa11.6□□□□□ -0.55
HCG27-205ENST00000638546 GAGE6Q13070 117 aa11.6□□□□□ -0.55
HCG27-205ENST00000638546 CELA1Q9UNI1 258 aa11.6□□□□□ -0.55
HCG27-205ENST00000638546 IGHV1-58A0A0C4DH39 117 aa11.6□□□□□ -0.55
HCG27-205ENST00000638546 A0A0J9YY99 117 aa11.6□□□□□ -0.55
HCG27-205ENST00000638546 IGHV3-30-3P0DP02 117 aa11.6□□□□□ -0.55
HCG27-205ENST00000638546 HERVK_113P63121 156 aa11.6□□□□□ -0.55
HCG27-205ENST00000638546 CHCHD5Q9BSY4 110 aa11.6□□□□□ -0.55
HCG27-205ENST00000638546 SMIM13P0DJ93 91 aa11.59□□□□□ -0.55
HCG27-205ENST00000638546 LINC00242Q5T6M2 205 aa11.59□□□□□ -0.55
HCG27-205ENST00000638546 TEX48A0A1B0GUV7 120 aa11.58□□□□□ -0.56
HCG27-205ENST00000638546 VSIG2Q96IQ7 327 aa11.58□□□□□ -0.56
HCG27-205ENST00000638546 TRRAPQ9Y4A5 3859 aa11.58□□□□□ -0.56
HCG27-205ENST00000638546 TRAV13-1A0A0B4J241 112 aa11.57□□□□□ -0.56
HCG27-205ENST00000638546 K7EP13 123 aa11.57□□□□□ -0.56
HCG27-205ENST00000638546 SPINK8P0C7L1 97 aa11.57□□□□□ -0.56
HCG27-205ENST00000638546 COX6A2Q02221 97 aa11.57□□□□□ -0.56
HCG27-205ENST00000638546 SRSF9Q13242 221 aaKnown RBP eCLIP11.57□□□□□ -0.56
HCG27-205ENST00000638546 SPANXB1Q9NS25 103 aaPredicted RBP11.57□□□□□ -0.56
HCG27-205ENST00000638546 CDKN2A-AS1Q9UH64 79 aa11.57□□□□□ -0.56
HCG27-205ENST00000638546 TRAV8-3A0A0A6YYJ7 113 aa11.57□□□□□ -0.56
HCG27-205ENST00000638546 G3V4G9 280 aa11.57□□□□□ -0.56
HCG27-205ENST00000638546 C9orf118A6NHY6 69 aa11.56□□□□□ -0.56
HCG27-205ENST00000638546 F5H768 121 aa11.56□□□□□ -0.56
HCG27-205ENST00000638546 VAMP3Q15836 100 aa11.55□□□□□ -0.56
HCG27-205ENST00000638546 CMYA5Q8N3K9 4069 aa11.54□□□□□ -0.56
HCG27-205ENST00000638546 SAMD5Q5TGI4 173 aa11.54□□□□□ -0.56
HCG27-205ENST00000638546 RAB37Q96AX2 223 aa11.54□□□□□ -0.56
HCG27-205ENST00000638546 NHP2Q9NX24 153 aaKnown RBP11.54□□□□□ -0.56
HCG27-205ENST00000638546 IGLV4-60A0A075B6I1 120 aa11.53□□□□□ -0.56
HCG27-205ENST00000638546 TRAV26-1A0A087WT03 109 aa11.53□□□□□ -0.56
HCG27-205ENST00000638546 RETNQ9HD89 108 aa11.53□□□□□ -0.56
HCG27-205ENST00000638546 ANK2Q01484 3957 aa11.53□□□□□ -0.56
HCG27-205ENST00000638546 A0A096LPF7 62 aa11.53□□□□□ -0.56
HCG27-205ENST00000638546 C12orf74Q32Q52 190 aa11.53□□□□□ -0.56
HCG27-205ENST00000638546 NDUFA12Q9UI09 145 aa11.53□□□□□ -0.56
HCG27-205ENST00000638546 NBEAL2Q6ZNJ1 2754 aa11.52□□□□□ -0.57
HCG27-205ENST00000638546 A0A0J9YXY3 114 aa11.52□□□□□ -0.57
HCG27-205ENST00000638546 TMEM238LA0A1B0GVL6 79 aa11.52□□□□□ -0.57
HCG27-205ENST00000638546 A6NJY4 79 aa11.52□□□□□ -0.57
HCG27-205ENST00000638546 HTN3P15516 51 aa11.52□□□□□ -0.57
HCG27-205ENST00000638546 UBE2V1Q13404 147 aa11.52□□□□□ -0.57
HCG27-205ENST00000638546 C10orf126Q8N4M7 172 aa11.52□□□□□ -0.57
HCG27-205ENST00000638546 IGLV5-39A0A0G2JS06 123 aa11.51□□□□□ -0.57
HCG27-205ENST00000638546 TMEM262E9PQX1 116 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms