RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 PATJQ8NI35 1801 aa0.34□□□□□ -2.35
GYPB-216ENST00000638448 ARFGEF1Q9Y6D6 1849 aa0.34□□□□□ -2.35
GYPB-216ENST00000638448 CHD9Q3L8U1 2897 aa0.34□□□□□ -2.35
GYPB-216ENST00000638448 TRAV22A0A0B4J277 110 aa0.34□□□□□ -2.36
GYPB-216ENST00000638448 CHKB-CPT1BH3BT56 60 aa0.34□□□□□ -2.36
GYPB-216ENST00000638448 SFT2D2O95562 160 aa0.34□□□□□ -2.36
GYPB-216ENST00000638448 UBE2D3P61077 147 aa0.34□□□□□ -2.36
GYPB-216ENST00000638448 GNG11P61952 73 aa0.34□□□□□ -2.36
GYPB-216ENST00000638448 UBE2D2P62837 147 aa0.34□□□□□ -2.36
GYPB-216ENST00000638448 Q5BKY6 102 aa0.34□□□□□ -2.36
GYPB-216ENST00000638448 C14orf144Q96I85 54 aa0.34□□□□□ -2.36
GYPB-216ENST00000638448 IFT172Q9UG01 1749 aa0.34□□□□□ -2.36
GYPB-216ENST00000638448 TNCP24821 2201 aa0.34□□□□□ -2.36
GYPB-216ENST00000638448 AHCTF1Q8WYP5 2266 aa0.34□□□□□ -2.36
GYPB-216ENST00000638448 LRRC37A2A6NM11 1700 aa0.33□□□□□ -2.36
GYPB-216ENST00000638448 ATP6V1G2-DDX39BF2Z307 99 aa0.33□□□□□ -2.36
GYPB-216ENST00000638448 COX6CP09669 75 aa0.33□□□□□ -2.36
GYPB-216ENST00000638448 S100A3P33764 101 aa0.33□□□□□ -2.36
GYPB-216ENST00000638448 KRTDAPP60985 99 aa0.33□□□□□ -2.36
GYPB-216ENST00000638448 SPRR4Q96PI1 79 aa0.33□□□□□ -2.36
GYPB-216ENST00000638448 C12orf57Q99622 126 aa0.33□□□□□ -2.36
GYPB-216ENST00000638448 NPVFQ9HCQ7 196 aa0.33□□□□□ -2.36
GYPB-216ENST00000638448 NXT2Q9NPJ8 142 aaKnown RBP0.33□□□□□ -2.36
GYPB-216ENST00000638448 SHROOM2Q13796 1616 aa0.33□□□□□ -2.36
GYPB-216ENST00000638448 CUL7Q14999 1698 aa0.33□□□□□ -2.36
GYPB-216ENST00000638448 CELSR2Q9HCU4 2923 aa0.33□□□□□ -2.36
GYPB-216ENST00000638448 ARHGAP5Q13017 1502 aa0.33□□□□□ -2.36
GYPB-216ENST00000638448 PRDM2Q13029 1718 aa0.33□□□□□ -2.36
GYPB-216ENST00000638448 SPTBN2O15020 2390 aa0.32□□□□□ -2.36
GYPB-216ENST00000638448 GOLGA4Q13439 2230 aaKnown RBP0.32□□□□□ -2.36
GYPB-216ENST00000638448 CACNA1CQ13936 2221 aa0.32□□□□□ -2.36
GYPB-216ENST00000638448 TMEM218A2RU14 115 aa0.32□□□□□ -2.36
GYPB-216ENST00000638448 MGPP08493 103 aa0.32□□□□□ -2.36
GYPB-216ENST00000638448 SNCAP37840 140 aa0.32□□□□□ -2.36
GYPB-216ENST00000638448 MYOM1P52179 1685 aa0.32□□□□□ -2.36
GYPB-216ENST00000638448 DOCK1Q14185 1865 aa0.32□□□□□ -2.36
GYPB-216ENST00000638448 OTOGQ6ZRI0 2925 aa0.32□□□□□ -2.36
GYPB-216ENST00000638448 MYH8P13535 1937 aa0.32□□□□□ -2.36
GYPB-216ENST00000638448 ZFYVE16Q7Z3T8 1539 aa0.32□□□□□ -2.36
GYPB-216ENST00000638448 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
GYPB-216ENST00000638448 ZFHX3Q15911 3703 aa0.31□□□□□ -2.36
GYPB-216ENST00000638448 ROBO1Q9Y6N7 1651 aa0.31□□□□□ -2.36
GYPB-216ENST00000638448 MRC2Q9UBG0 1479 aa0.31□□□□□ -2.36
GYPB-216ENST00000638448 TRAV30A0A087WSZ9 112 aa0.31□□□□□ -2.36
GYPB-216ENST00000638448 PHGR1C9JFL3 82 aa0.31□□□□□ -2.36
GYPB-216ENST00000638448 RBP2P50120 134 aa0.31□□□□□ -2.36
GYPB-216ENST00000638448 Q0VG73 95 aa0.31□□□□□ -2.36
GYPB-216ENST00000638448 FAM213BQ8TBF2 198 aa0.31□□□□□ -2.36
GYPB-216ENST00000638448 TMEM263Q8WUH6 116 aaKnown RBP0.31□□□□□ -2.36
GYPB-216ENST00000638448 MANBALQ9NQG1 85 aa0.31□□□□□ -2.36
GYPB-216ENST00000638448 PRO1854Q9UHT4 67 aa0.31□□□□□ -2.36
GYPB-216ENST00000638448 SPCS1Q9Y6A9 102 aa0.31□□□□□ -2.36
GYPB-216ENST00000638448 HMGXB3Q12766 1538 aa0.31□□□□□ -2.36
GYPB-216ENST00000638448 PTPRZ1P23471 2315 aaPredicted RBP0.31□□□□□ -2.36
GYPB-216ENST00000638448 PLCE1Q9P212 2302 aa0.3□□□□□ -2.36
GYPB-216ENST00000638448 LRP1Q07954 4544 aaKnown RBP0.3□□□□□ -2.36
GYPB-216ENST00000638448 IGLC1P0CG04 106 aa0.3□□□□□ -2.36
GYPB-216ENST00000638448 Q6JHZ5 121 aa0.3□□□□□ -2.36
GYPB-216ENST00000638448 ACBD7Q8N6N7 88 aa0.3□□□□□ -2.36
GYPB-216ENST00000638448 DIP2CQ9Y2E4 1556 aa0.3□□□□□ -2.36
GYPB-216ENST00000638448 C2CD3Q4AC94 2353 aa0.3□□□□□ -2.36
GYPB-216ENST00000638448 IGF2RP11717 2491 aa0.29□□□□□ -2.36
GYPB-216ENST00000638448 DOCK2Q92608 1830 aa0.29□□□□□ -2.36
GYPB-216ENST00000638448 ZFYVE26Q68DK2 2539 aa0.29□□□□□ -2.36
GYPB-216ENST00000638448 CRYM-AS1A6NIL9 109 aa0.29□□□□□ -2.36
GYPB-216ENST00000638448 SPINK1P00995 79 aa0.29□□□□□ -2.36
GYPB-216ENST00000638448 TRAPPC2P0DI81 140 aa0.29□□□□□ -2.36
GYPB-216ENST00000638448 TRAPPC2BP0DI82 140 aa0.29□□□□□ -2.36
GYPB-216ENST00000638448 S100A10P60903 97 aa0.29□□□□□ -2.36
GYPB-216ENST00000638448 HAMPP81172 84 aa0.29□□□□□ -2.36
GYPB-216ENST00000638448 SFTA2Q6UW10 78 aa0.29□□□□□ -2.36
GYPB-216ENST00000638448 FAIMQ9NVQ4 179 aa0.29□□□□□ -2.36
GYPB-216ENST00000638448 NAV2Q8IVL1 2488 aa0.29□□□□□ -2.36
GYPB-216ENST00000638448 EHBP1L1Q8N3D4 1523 aa0.28□□□□□ -2.36
GYPB-216ENST00000638448 RAPGEF6Q8TEU7 1601 aa0.28□□□□□ -2.36
GYPB-216ENST00000638448 SPHKAPQ2M3C7 1700 aa0.28□□□□□ -2.36
GYPB-216ENST00000638448 hADV29S1A0JD25 119 aa0.28□□□□□ -2.36
GYPB-216ENST00000638448 NDUFC1O43677 76 aa0.28□□□□□ -2.36
GYPB-216ENST00000638448 BCE1O60756 84 aa0.28□□□□□ -2.36
GYPB-216ENST00000638448 SAA2P0DJI9 122 aaPredicted RBP0.28□□□□□ -2.36
GYPB-216ENST00000638448 ARL2-SNX15V9GYD0 113 aa0.28□□□□□ -2.36
GYPB-216ENST00000638448 PSME4Q14997 1843 aa0.28□□□□□ -2.36
GYPB-216ENST00000638448 NSD3Q9BZ95 1437 aa0.28□□□□□ -2.37
GYPB-216ENST00000638448 CSMD3Q7Z407 3707 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 M0R143 59 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 M0R3E3 92 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 GNGT2O14610 69 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 UBA52P62987 128 aaKnown RBP0.27□□□□□ -2.37
GYPB-216ENST00000638448 SEC11AP67812 179 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 NCMAPQ5T1S8 102 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 FAM223AQ8IWN6 122 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 LINC00846Q9NV44 126 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 PRO0255Q9UI72 69 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 AP4S1Q9Y587 144 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 AKAP6Q13023 2319 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 ABCC5O15440 1437 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 CNTLNQ9NXG0 1405 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 LRP6O75581 1613 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 ZNF236Q9UL36 1845 aa0.27□□□□□ -2.37
GYPB-216ENST00000638448 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms