RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 PRM2P04554 102 aa9.19□□□□□ -0.94
TCF4-289ENST00000637941 DAZ2Q13117 558 aaKnown RBP9.19□□□□□ -0.94
TCF4-289ENST00000637941 FAM19A3Q7Z5A8 133 aa9.19□□□□□ -0.94
TCF4-289ENST00000637941 DAZ4Q86SG3 579 aaKnown RBP9.19□□□□□ -0.94
TCF4-289ENST00000637941 IL17DQ8TAD2 202 aa9.19□□□□□ -0.94
TCF4-289ENST00000637941 DAZ3Q9NR90 486 aaKnown RBP9.19□□□□□ -0.94
TCF4-289ENST00000637941 HIST2H2BCQ6DN03 193 aa9.19□□□□□ -0.94
TCF4-289ENST00000637941 XCL2Q9UBD3 114 aa9.19□□□□□ -0.94
TCF4-289ENST00000637941 PTPN13Q12923 2485 aa9.18□□□□□ -0.94
TCF4-289ENST00000637941 RPL13AP40429 203 aaKnown RBP9.18□□□□□ -0.94
TCF4-289ENST00000637941 CKS1BP61024 79 aa9.18□□□□□ -0.94
TCF4-289ENST00000637941 ODF3L2Q3SX64 289 aa9.18□□□□□ -0.94
TCF4-289ENST00000637941 ADAMTSL4-AS1Q5T5F5 129 aa9.18□□□□□ -0.94
TCF4-289ENST00000637941 Q9UF83 564 aa9.18□□□□□ -0.94
TCF4-289ENST00000637941 CDKN2A-AS1Q9UH64 79 aa9.18□□□□□ -0.94
TCF4-289ENST00000637941 CELSR2Q9HCU4 2923 aa9.18□□□□□ -0.94
TCF4-289ENST00000637941 TRGV1A0A0A0MS02 117 aa9.17□□□□□ -0.94
TCF4-289ENST00000637941 TRAV4A0A0B4J268 109 aa9.17□□□□□ -0.94
TCF4-289ENST00000637941 H3BT86 120 aa9.17□□□□□ -0.94
TCF4-289ENST00000637941 K7EQD1 137 aa9.17□□□□□ -0.94
TCF4-289ENST00000637941 TMEM101Q96IK0 257 aa9.17□□□□□ -0.94
TCF4-289ENST00000637941 POLQO75417 2590 aa9.17□□□□□ -0.94
TCF4-289ENST00000637941 Q6ZSV7 163 aa9.17□□□□□ -0.94
TCF4-289ENST00000637941 WFDC11Q8NEX6 87 aa9.17□□□□□ -0.94
TCF4-289ENST00000637941 USP9YO00507 2555 aaPredicted RBP9.16□□□□□ -0.94
TCF4-289ENST00000637941 XGP55808 180 aa9.16□□□□□ -0.94
TCF4-289ENST00000637941 FHL3Q13643 280 aa9.16□□□□□ -0.94
TCF4-289ENST00000637941 C1orf158Q8N1D5 194 aa9.16□□□□□ -0.94
TCF4-289ENST00000637941 IGLV5-39A0A0G2JS06 123 aa9.16□□□□□ -0.94
TCF4-289ENST00000637941 MT-ATP8P03928 68 aa9.16□□□□□ -0.94
TCF4-289ENST00000637941 NTN5Q8WTR8 489 aaPredicted RBP9.16□□□□□ -0.94
TCF4-289ENST00000637941 UBE2WQ96B02 151 aa9.16□□□□□ -0.94
TCF4-289ENST00000637941 IGHV3OR16-12A0A075B7B8 117 aa9.15□□□□□ -0.94
TCF4-289ENST00000637941 C2orf82Q6UX34 121 aa9.15□□□□□ -0.94
TCF4-289ENST00000637941 NAV2Q8IVL1 2488 aa9.15□□□□□ -0.94
TCF4-289ENST00000637941 A8MZ25 164 aa9.14□□□□□ -0.95
TCF4-289ENST00000637941 CCL24O00175 119 aa9.14□□□□□ -0.95
TCF4-289ENST00000637941 LINC00242Q5T6M2 205 aa9.14□□□□□ -0.95
TCF4-289ENST00000637941 HERV-K104P63124 156 aa9.14□□□□□ -0.95
TCF4-289ENST00000637941 PPDPFQ9H3Y8 114 aa9.14□□□□□ -0.95
TCF4-289ENST00000637941 TRAV8-4A0A0B4J246 113 aa9.13□□□□□ -0.95
TCF4-289ENST00000637941 DNAJC9-AS1A6NH13 148 aa9.13□□□□□ -0.95
TCF4-289ENST00000637941 LST1O00453 97 aa9.13□□□□□ -0.95
TCF4-289ENST00000637941 NPC2P61916 151 aa9.13□□□□□ -0.95
TCF4-289ENST00000637941 Q9H8V8 135 aa9.13□□□□□ -0.95
TCF4-289ENST00000637941 H7C423 109 aa9.13□□□□□ -0.95
TCF4-289ENST00000637941 UBE2L6O14933 153 aa9.13□□□□□ -0.95
TCF4-289ENST00000637941 C16orf74Q96GX8 76 aa9.13□□□□□ -0.95
TCF4-289ENST00000637941 LINC00308Q8TCZ7 52 aa9.12□□□□□ -0.95
TCF4-289ENST00000637941 CREBBPQ92793 2442 aa9.12□□□□□ -0.95
TCF4-289ENST00000637941 MAP1AP78559 2803 aaPredicted RBP9.12□□□□□ -0.95
TCF4-289ENST00000637941 ABCA12Q86UK0 2595 aa9.11□□□□□ -0.95
TCF4-289ENST00000637941 SMIM1B2RUZ4 78 aa9.11□□□□□ -0.95
TCF4-289ENST00000637941 SNCGO76070 127 aa9.11□□□□□ -0.95
TCF4-289ENST00000637941 COX6A2Q02221 97 aa9.11□□□□□ -0.95
TCF4-289ENST00000637941 FAM110AQ9BQ89 295 aa9.11□□□□□ -0.95
TCF4-289ENST00000637941 TMEM243Q9BU79 118 aa9.11□□□□□ -0.95
TCF4-289ENST00000637941 Q6ZTI0 123 aa9.11□□□□□ -0.95
TCF4-289ENST00000637941 A0A1W2PRX2 142 aa9.1□□□□□ -0.95
TCF4-289ENST00000637941 PRIMA1Q86XR5 153 aa9.1□□□□□ -0.95
TCF4-289ENST00000637941 CDC42SE2Q9NRR3 84 aa9.1□□□□□ -0.95
TCF4-289ENST00000637941 TRAV13-1A0A0B4J241 112 aa9.1□□□□□ -0.95
TCF4-289ENST00000637941 LINC00694P0DN24 101 aa9.1□□□□□ -0.95
TCF4-289ENST00000637941 MEIG1Q5JSS6 88 aa9.1□□□□□ -0.95
TCF4-289ENST00000637941 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.1□□□□□ -0.95
TCF4-289ENST00000637941 KMT2BQ9UMN6 2715 aaPredicted RBP9.1□□□□□ -0.95
TCF4-289ENST00000637941 TEX49A0A1B0GTD5 131 aa9.09□□□□□ -0.95
TCF4-289ENST00000637941 GAGE12JA6NER3 117 aa9.09□□□□□ -0.95
TCF4-289ENST00000637941 GAGE4Q13068 117 aa9.09□□□□□ -0.95
TCF4-289ENST00000637941 GAGE5Q13069 117 aa9.09□□□□□ -0.95
TCF4-289ENST00000637941 MRPL23Q16540 153 aaKnown RBP9.09□□□□□ -0.95
TCF4-289ENST00000637941 NTM-AS1Q6ZSK4 140 aa9.09□□□□□ -0.95
TCF4-289ENST00000637941 NBPF19A0A087WUL8 3843 aa9.09□□□□□ -0.95
TCF4-289ENST00000637941 CENPEQ02224 2701 aa9.09□□□□□ -0.95
TCF4-289ENST00000637941 TRBV6-4A0A1B0GX49 114 aa9.08□□□□□ -0.96
TCF4-289ENST00000637941 DAND5Q8N907 189 aa9.08□□□□□ -0.96
TCF4-289ENST00000637941 CLEC2BQ92478 149 aa9.08□□□□□ -0.96
TCF4-289ENST00000637941 ZNF625Q96I27 306 aaPredicted RBP9.08□□□□□ -0.96
TCF4-289ENST00000637941 NOP10Q9NPE3 64 aaKnown RBP9.08□□□□□ -0.96
TCF4-289ENST00000637941 FAM240AA0A1B0GVK7 77 aa9.08□□□□□ -0.96
TCF4-289ENST00000637941 CITED1Q99966 193 aa9.08□□□□□ -0.96
TCF4-289ENST00000637941 APCP25054 2843 aa9.08□□□□□ -0.96
TCF4-289ENST00000637941 TRGV2A0A075B6R0 118 aa9.07□□□□□ -0.96
TCF4-289ENST00000637941 COX7A2LO14548 114 aa9.07□□□□□ -0.96
TCF4-289ENST00000637941 DEFB121Q5J5C9 76 aa9.07□□□□□ -0.96
TCF4-289ENST00000637941 CITED2Q99967 270 aaPredicted RBP9.07□□□□□ -0.96
TCF4-289ENST00000637941 C16orf95Q9H693 158 aa9.07□□□□□ -0.96
TCF4-289ENST00000637941 F5H768 121 aa9.07□□□□□ -0.96
TCF4-289ENST00000637941 GAGE2BQ13066 116 aa9.07□□□□□ -0.96
TCF4-289ENST00000637941 GAGE2EQ4V326 116 aa9.07□□□□□ -0.96
TCF4-289ENST00000637941 Q6Q795 121 aa9.07□□□□□ -0.96
TCF4-289ENST00000637941 GAGE2DQ9UEU5 116 aa9.07□□□□□ -0.96
TCF4-289ENST00000637941 PF4P02776 101 aa9.06□□□□□ -0.96
TCF4-289ENST00000637941 C11orf44Q8N8P7 122 aa9.06□□□□□ -0.96
TCF4-289ENST00000637941 OVOL2Q9BRP0 275 aa9.06□□□□□ -0.96
TCF4-289ENST00000637941 ZANQ9Y493 2812 aa9.06□□□□□ -0.96
TCF4-289ENST00000637941 ANAPC13Q9BS18 74 aa9.05□□□□□ -0.96
TCF4-289ENST00000637941 CHD6Q8TD26 2715 aa9.05□□□□□ -0.96
TCF4-289ENST00000637941 TRGV4A0A0C4DH28 118 aa9.05□□□□□ -0.96
TCF4-289ENST00000637941 KRTAP1-1Q07627 177 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms