RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 TINCRA0A1B0GVN0 87 aa4.43□□□□□ -1.7
CACNA1D-227ENST00000637844 LINC00694P0DN24 101 aa4.43□□□□□ -1.7
CACNA1D-227ENST00000637844 LGALS3P17931 250 aaKnown RBP4.43□□□□□ -1.7
CACNA1D-227ENST00000637844 MRPL23Q16540 153 aaKnown RBP4.43□□□□□ -1.7
CACNA1D-227ENST00000637844 DEFB121Q5J5C9 76 aa4.43□□□□□ -1.7
CACNA1D-227ENST00000637844 CEMP1Q6PRD7 247 aaPredicted RBP4.43□□□□□ -1.7
CACNA1D-227ENST00000637844 NTM-AS1Q6ZSK4 140 aa4.43□□□□□ -1.7
CACNA1D-227ENST00000637844 Q6ZUT4 128 aa4.43□□□□□ -1.7
CACNA1D-227ENST00000637844 HIGD1BQ9P298 99 aa4.43□□□□□ -1.7
CACNA1D-227ENST00000637844 CELA1Q9UNI1 258 aa4.43□□□□□ -1.7
CACNA1D-227ENST00000637844 ICOSQ9Y6W8 199 aa4.43□□□□□ -1.7
CACNA1D-227ENST00000637844 IGKV2D-26A0A0A0MRZ7 120 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 A0A0J9YXV3 536 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 A0A0J9YY99 117 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 MYMXA0A1B0GTQ4 84 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 TMEM262E9PQX1 116 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 HINT1P49773 126 aaPredicted RBP4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 TIRAPP58753 221 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 HERVK_113P63121 156 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 HSD52Q0P140 79 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 GAGE6Q13070 117 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 RNASE13Q5GAN3 156 aaKnown RBP4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 COL5A1-AS1Q5SY13 56 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 SCGB1D4Q6XE38 83 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 PCP2Q8IVA1 136 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 SBSPONQ8IVN8 264 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 PLEKHB2Q96CS7 222 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 SNHG12Q9BXW3 62 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 RETNQ9HD89 108 aa4.42□□□□□ -1.7
CACNA1D-227ENST00000637844 TMEM223A0PJW6 202 aa4.41□□□□□ -1.7
CACNA1D-227ENST00000637844 ZNF815PA8K554 130 aa4.41□□□□□ -1.7
CACNA1D-227ENST00000637844 H3BNG1 76 aa4.41□□□□□ -1.7
CACNA1D-227ENST00000637844 EREGO14944 169 aa4.41□□□□□ -1.7
CACNA1D-227ENST00000637844 LEPROTO15243 131 aa4.41□□□□□ -1.7
CACNA1D-227ENST00000637844 ZNF22P17026 224 aaPredicted RBP4.41□□□□□ -1.7
CACNA1D-227ENST00000637844 UBE2D1P51668 147 aa4.41□□□□□ -1.7
CACNA1D-227ENST00000637844 KPRPQ5T749 579 aaPredicted RBP4.41□□□□□ -1.7
CACNA1D-227ENST00000637844 C2orf91Q6ZV80 131 aa4.41□□□□□ -1.7
CACNA1D-227ENST00000637844 LINC00469Q8N7U9 141 aa4.41□□□□□ -1.7
CACNA1D-227ENST00000637844 C11orf45Q8TAV5 145 aa4.41□□□□□ -1.7
CACNA1D-227ENST00000637844 CDC42SE2Q9NRR3 84 aa4.41□□□□□ -1.7
CACNA1D-227ENST00000637844 A0A096LPF7 62 aa4.4□□□□□ -1.71
CACNA1D-227ENST00000637844 A0A0J9YWU9 116 aa4.4□□□□□ -1.71
CACNA1D-227ENST00000637844 A6NDN8 102 aa4.4□□□□□ -1.71
CACNA1D-227ENST00000637844 J3QQQ9 107 aa4.4□□□□□ -1.71
CACNA1D-227ENST00000637844 TAL2Q16559 108 aa4.4□□□□□ -1.71
CACNA1D-227ENST00000637844 C12orf74Q32Q52 190 aa4.4□□□□□ -1.71
CACNA1D-227ENST00000637844 MPV17L2Q567V2 206 aa4.4□□□□□ -1.71
CACNA1D-227ENST00000637844 FAM19A3Q7Z5A8 133 aa4.4□□□□□ -1.71
CACNA1D-227ENST00000637844 VSIG2Q96IQ7 327 aa4.4□□□□□ -1.71
CACNA1D-227ENST00000637844 MDFIQ99750 246 aa4.4□□□□□ -1.71
CACNA1D-227ENST00000637844 TENM1Q9UKZ4 2725 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 TRAV13-1A0A0B4J241 112 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 IGHV1-58A0A0C4DH39 117 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 A0A1B0GUV1 79 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 K7EIL1 84 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 CCL25O15444 150 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 PTTG1IPP53801 180 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 SS18Q15532 418 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 BVES-AS1Q5T3Y7 98 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 LELP1Q5T871 98 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 MAPKAPK5-AS1Q8N8E1 139 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 MRAPQ8TCY5 172 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 ORAOV1Q8WV07 137 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 HIST1H4GQ99525 98 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 TM2D3Q9BRN9 247 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 TP73-AS1Q9UF72 201 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 NIPBLQ6KC79 2804 aaeCLIP4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 ATRQ13535 2644 aa4.39□□□□□ -1.71
CACNA1D-227ENST00000637844 IGHV3-64A0A075B6Q5 118 aa4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 IGLV5-45A0A087WSX0 123 aa4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 DEFB131BA0A096LNP1 70 aa4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 TRAV10A0A0B4J240 114 aa4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 TMEM238LA0A1B0GVL6 79 aa4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 A6NJY4 79 aa4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 PRB2P02812 416 aaPredicted RBP4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 SPINK8P0C7L1 97 aa4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 IGHV3-30-3P0DP02 117 aa4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 GCSHP23434 173 aa4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 RBX1P62877 108 aa4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 SRSF9Q13242 221 aaKnown RBP eCLIP4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 LINC00242Q5T6M2 205 aa4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 Q6ZTC4 211 aa4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 FAM104AQ969W3 186 aa4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 TTTY13Q9BZ97 58 aa4.38□□□□□ -1.71
CACNA1D-227ENST00000637844 IGKV3OR2-268A0A0C4DH90 116 aa4.37□□□□□ -1.71
CACNA1D-227ENST00000637844 TMEM238C9JI98 176 aa4.37□□□□□ -1.71
CACNA1D-227ENST00000637844 NANOS2P60321 138 aaKnown RBP4.37□□□□□ -1.71
CACNA1D-227ENST00000637844 CIRBPQ14011 172 aaKnown RBP4.37□□□□□ -1.71
CACNA1D-227ENST00000637844 CEND1Q8N111 149 aa4.37□□□□□ -1.71
CACNA1D-227ENST00000637844 CDKN2A-AS1Q9UH64 79 aa4.37□□□□□ -1.71
CACNA1D-227ENST00000637844 IGLV4-60A0A075B6I1 120 aa4.36□□□□□ -1.71
CACNA1D-227ENST00000637844 TRAV8-3A0A0A6YYJ7 113 aa4.36□□□□□ -1.71
CACNA1D-227ENST00000637844 LINC00959A0A1B0GUT2 108 aa4.36□□□□□ -1.71
CACNA1D-227ENST00000637844 ANGP03950 147 aaKnown RBP4.36□□□□□ -1.71
CACNA1D-227ENST00000637844 SMIM13P0DJ93 91 aa4.36□□□□□ -1.71
CACNA1D-227ENST00000637844 ZFAND6Q6FIF0 208 aa4.36□□□□□ -1.71
CACNA1D-227ENST00000637844 C15orf53Q8NAA6 179 aa4.36□□□□□ -1.71
CACNA1D-227ENST00000637844 COPS9Q8WXC6 57 aa4.36□□□□□ -1.71
CACNA1D-227ENST00000637844 SPANXB1Q9NS25 103 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms