RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 Q6ZVH6 145 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 DAZ4Q86SG3 579 aaKnown RBP3.36□□□□□ -1.87
SCN8A-213ENST00000637540 OR5A1Q8NGJ0 315 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 RPL36ALQ969Q0 106 aaKnown RBP3.36□□□□□ -1.87
SCN8A-213ENST00000637540 VSIG2Q96IQ7 327 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 PRADC1Q9BSG0 188 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 DAZ3Q9NR90 486 aaKnown RBP3.36□□□□□ -1.87
SCN8A-213ENST00000637540 A0A0J9YY99 117 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 MYMXA0A1B0GTQ4 84 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 TINCRA0A1B0GVN0 87 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 A0A1B0GWB2 263 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 H7C423 109 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 LEPROTO15243 131 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 FXYD2P54710 66 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 APOC4P55056 127 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 SEC11AP67812 179 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 COX6A2Q02221 97 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 TAL2Q16559 108 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 DEFB135Q30KP9 77 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 FAM222AQ5U5X8 452 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 SHISA2Q6UWI4 295 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 OR11H2Q8NH07 326 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 ORAOV1Q8WV07 137 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 PLEKHB2Q96CS7 222 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 CHAC1Q9BUX1 264 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 VCX2Q9H322 139 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 CDC42SE2Q9NRR3 84 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 ZMAT5Q9UDW3 170 aaKnown RBP3.35□□□□□ -1.87
SCN8A-213ENST00000637540 CELA1Q9UNI1 258 aa3.35□□□□□ -1.87
SCN8A-213ENST00000637540 DYNC2H1Q8NCM8 4307 aaKnown RBP3.35□□□□□ -1.87
SCN8A-213ENST00000637540 TRGV2A0A075B6R0 118 aa3.34□□□□□ -1.87
SCN8A-213ENST00000637540 TRBV6-8A0A0A6YYG3 113 aa3.34□□□□□ -1.87
SCN8A-213ENST00000637540 TRAV8-6A0A0B4J262 113 aa3.34□□□□□ -1.87
SCN8A-213ENST00000637540 IGLV5-39A0A0G2JS06 123 aa3.34□□□□□ -1.87
SCN8A-213ENST00000637540 F5H768 121 aa3.34□□□□□ -1.87
SCN8A-213ENST00000637540 MIFP14174 115 aa3.34□□□□□ -1.87
SCN8A-213ENST00000637540 BATFQ16520 125 aa3.34□□□□□ -1.87
SCN8A-213ENST00000637540 RNASE13Q5GAN3 156 aaKnown RBP3.34□□□□□ -1.87
SCN8A-213ENST00000637540 LINC00242Q5T6M2 205 aa3.34□□□□□ -1.87
SCN8A-213ENST00000637540 SAMD5Q5TGI4 173 aa3.34□□□□□ -1.87
SCN8A-213ENST00000637540 CEND1Q8N111 149 aa3.34□□□□□ -1.87
SCN8A-213ENST00000637540 LITAFQ99732 161 aa3.34□□□□□ -1.87
SCN8A-213ENST00000637540 COX11Q9Y6N1 276 aa3.34□□□□□ -1.87
SCN8A-213ENST00000637540 COL7A1Q02388 2944 aa3.34□□□□□ -1.87
SCN8A-213ENST00000637540 TRGV4A0A0C4DH28 118 aa3.33□□□□□ -1.88
SCN8A-213ENST00000637540 H3BRM9 83 aa3.33□□□□□ -1.88
SCN8A-213ENST00000637540 J3QQQ9 107 aa3.33□□□□□ -1.88
SCN8A-213ENST00000637540 DEFB130BP0DP73 79 aa3.33□□□□□ -1.88
SCN8A-213ENST00000637540 DEFB130AP0DP74 79 aa3.33□□□□□ -1.88
SCN8A-213ENST00000637540 ZNF25P17030 456 aaPredicted RBP3.33□□□□□ -1.88
SCN8A-213ENST00000637540 C10orf126Q8N4M7 172 aa3.33□□□□□ -1.88
SCN8A-213ENST00000637540 TMEM243Q9BU79 118 aa3.33□□□□□ -1.88
SCN8A-213ENST00000637540 SPANXB1Q9NS25 103 aaPredicted RBP3.33□□□□□ -1.88
SCN8A-213ENST00000637540 CDKN2A-AS1Q9UH64 79 aa3.33□□□□□ -1.88
SCN8A-213ENST00000637540 PRO0255Q9UI72 69 aa3.33□□□□□ -1.88
SCN8A-213ENST00000637540 IGLV4-60A0A075B6I1 120 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 TRAV8-3A0A0A6YYJ7 113 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 IGHV1-58A0A0C4DH39 117 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 A0A1B0GUV1 79 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 C9orf118A6NHY6 69 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 ZNF815PA8K554 130 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 G3V4G9 280 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 DEFB4AO15263 64 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 EIF4EBP3O60516 100 aaPredicted RBP3.32□□□□□ -1.88
SCN8A-213ENST00000637540 IGHV3-30P01768 117 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 IGHV3-30-3P0DP02 117 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 IGHV3-30-5P0DP03 117 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 GYPEP15421 78 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 HERVK_113P61574 105 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 C12orf74Q32Q52 190 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 TMEM170BQ5T4T1 132 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 LINC00469Q8N7U9 141 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 C3orf56Q8N813 242 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 TMEM101Q96IK0 257 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 STAB2Q8WWQ8 2551 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 DNAH1Q9P2D7 4330 aa3.32□□□□□ -1.88
SCN8A-213ENST00000637540 TRAV26-1A0A087WT03 109 aa3.31□□□□□ -1.88
SCN8A-213ENST00000637540 IGHV3OR16-9A0A0B4J2B5 98 aa3.31□□□□□ -1.88
SCN8A-213ENST00000637540 A0A0J9YXY3 114 aa3.31□□□□□ -1.88
SCN8A-213ENST00000637540 SMIM1B2RUZ4 78 aa3.31□□□□□ -1.88
SCN8A-213ENST00000637540 CCL25O15444 150 aa3.31□□□□□ -1.88
SCN8A-213ENST00000637540 KPRPQ5T749 579 aaPredicted RBP3.31□□□□□ -1.88
SCN8A-213ENST00000637540 ZFAND6Q6FIF0 208 aa3.31□□□□□ -1.88
SCN8A-213ENST00000637540 ATP6V0E2Q8NHE4 81 aa3.31□□□□□ -1.88
SCN8A-213ENST00000637540 C11orf68Q9H3H3 251 aaKnown RBP3.31□□□□□ -1.88
SCN8A-213ENST00000637540 A0A096LPF7 62 aa3.3□□□□□ -1.88
SCN8A-213ENST00000637540 A6NDN8 102 aa3.3□□□□□ -1.88
SCN8A-213ENST00000637540 H3BNG1 76 aa3.3□□□□□ -1.88
SCN8A-213ENST00000637540 PAX4O43316 350 aa3.3□□□□□ -1.88
SCN8A-213ENST00000637540 ATP5G1P05496 136 aa3.3□□□□□ -1.88
SCN8A-213ENST00000637540 SPINK8P0C7L1 97 aa3.3□□□□□ -1.88
SCN8A-213ENST00000637540 SPART-AS1P0CW21 52 aa3.3□□□□□ -1.88
SCN8A-213ENST00000637540 SMIM13P0DJ93 91 aa3.3□□□□□ -1.88
SCN8A-213ENST00000637540 GCSHP23434 173 aa3.3□□□□□ -1.88
SCN8A-213ENST00000637540 DAD1P61803 113 aa3.3□□□□□ -1.88
SCN8A-213ENST00000637540 HERVK_113P63121 156 aa3.3□□□□□ -1.88
SCN8A-213ENST00000637540 SMAGPQ0VAQ4 97 aa3.3□□□□□ -1.88
SCN8A-213ENST00000637540 GAGE6Q13070 117 aa3.3□□□□□ -1.88
SCN8A-213ENST00000637540 UBE2V1Q13404 147 aa3.3□□□□□ -1.88
SCN8A-213ENST00000637540 ADAMTSL4-AS1Q5T5F5 129 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 666.3 ms