RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 C9JAW5 83 aa4.52□□□□□ -1.69
GABRA1-213ENST00000636340 RBMY1DP0C7P1 496 aaKnown RBP4.52□□□□□ -1.69
GABRA1-213ENST00000636340 ADAMTSL4-AS1Q5T5F5 129 aa4.52□□□□□ -1.69
GABRA1-213ENST00000636340 CEMP1Q6PRD7 247 aaPredicted RBP4.52□□□□□ -1.69
GABRA1-213ENST00000636340 DUX5Q96PT3 197 aa4.52□□□□□ -1.69
GABRA1-213ENST00000636340 CHCHD7Q9BUK0 85 aa4.52□□□□□ -1.69
GABRA1-213ENST00000636340 A0A096LNT2 108 aa4.52□□□□□ -1.69
GABRA1-213ENST00000636340 TRAV8-3A0A0A6YYJ7 113 aa4.52□□□□□ -1.69
GABRA1-213ENST00000636340 TRBV30A0A0K0K1B3 111 aa4.52□□□□□ -1.69
GABRA1-213ENST00000636340 KNCNA6PVL3 124 aa4.52□□□□□ -1.69
GABRA1-213ENST00000636340 CD28P10747 220 aa4.52□□□□□ -1.69
GABRA1-213ENST00000636340 HOXD3P31249 432 aaPredicted RBP4.52□□□□□ -1.69
GABRA1-213ENST00000636340 SPXQ9BT56 116 aa4.52□□□□□ -1.69
GABRA1-213ENST00000636340 SPANXDQ9BXN6 97 aa4.52□□□□□ -1.69
GABRA1-213ENST00000636340 GEMIN7Q9H840 131 aaKnown RBP4.52□□□□□ -1.69
GABRA1-213ENST00000636340 SPANXCQ9NY87 97 aa4.52□□□□□ -1.69
GABRA1-213ENST00000636340 HIVEP1P15822 2718 aa4.52□□□□□ -1.69
GABRA1-213ENST00000636340 MTORP42345 2549 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 IGHV3-73A0A0B4J1V6 119 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 TINCRA0A1B0GVN0 87 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 H7C2G1 150 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 PRM2P04554 102 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 ATXN8Q156A1 80 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 LINC01620Q4KN68 170 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 Q5PR19 223 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 PIK3CD-AS1Q5SR53 167 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 MAPK1IP1LQ8NDC0 245 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 VSIG2Q96IQ7 327 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 CITED1Q99966 193 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 TIMM21Q9BVV7 248 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 ZNF702PQ9H963 129 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 UBE2D4Q9Y2X8 147 aa4.51□□□□□ -1.69
GABRA1-213ENST00000636340 A8MZ25 164 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 TMEM262E9PQX1 116 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 H3BMM0 161 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 RPL13AP40429 203 aaKnown RBP4.5□□□□□ -1.69
GABRA1-213ENST00000636340 UBE2E2Q96LR5 201 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 SPANXA1Q9NS26 97 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 NACAE9PAV3 2078 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.5□□□□□ -1.69
GABRA1-213ENST00000636340 CUBNO60494 3623 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 TRAV26-1A0A087WT03 109 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 TRBV10-2A0A0K0K1G8 114 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 FSHBP01225 129 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 DSCR9P59020 149 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 MIAQ16674 131 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 RNASE13Q5GAN3 156 aaKnown RBP4.5□□□□□ -1.69
GABRA1-213ENST00000636340 NTN5Q8WTR8 489 aaPredicted RBP4.5□□□□□ -1.69
GABRA1-213ENST00000636340 RNF183Q96D59 192 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 NDUFA12Q9UI09 145 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 TNFRSF18Q9Y5U5 241 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 SORL1Q92673 2214 aa4.5□□□□□ -1.69
GABRA1-213ENST00000636340 F8P00451 2351 aa4.49□□□□□ -1.69
GABRA1-213ENST00000636340 DEFB131AP59861 70 aa4.49□□□□□ -1.69
GABRA1-213ENST00000636340 ZFAND6Q6FIF0 208 aa4.49□□□□□ -1.69
GABRA1-213ENST00000636340 C18orf65Q6ZTR6 163 aa4.49□□□□□ -1.69
GABRA1-213ENST00000636340 C11orf72Q8NBR9 251 aa4.49□□□□□ -1.69
GABRA1-213ENST00000636340 LINC00467Q9BRT7 94 aa4.49□□□□□ -1.69
GABRA1-213ENST00000636340 VPREB3Q9UKI3 123 aa4.49□□□□□ -1.69
GABRA1-213ENST00000636340 CR1P17927 2039 aa4.49□□□□□ -1.69
GABRA1-213ENST00000636340 MXRA5Q9NR99 2828 aa4.49□□□□□ -1.69
GABRA1-213ENST00000636340 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.49□□□□□ -1.69
GABRA1-213ENST00000636340 IGLV5-45A0A087WSX0 123 aa4.49□□□□□ -1.69
GABRA1-213ENST00000636340 IGKV2-29A2NJV5 120 aaPredicted RBP4.49□□□□□ -1.69
GABRA1-213ENST00000636340 J3QLI3 93 aa4.49□□□□□ -1.69
GABRA1-213ENST00000636340 TIMM17BO60830 172 aa4.49□□□□□ -1.69
GABRA1-213ENST00000636340 Q6ZSV7 163 aa4.49□□□□□ -1.69
GABRA1-213ENST00000636340 ICOSQ9Y6W8 199 aa4.49□□□□□ -1.69
GABRA1-213ENST00000636340 H7C423 109 aa4.48□□□□□ -1.69
GABRA1-213ENST00000636340 IGHV3-53P01767 116 aa4.48□□□□□ -1.69
GABRA1-213ENST00000636340 PRSS2P07478 247 aa4.48□□□□□ -1.69
GABRA1-213ENST00000636340 HTN1P15515 57 aa4.48□□□□□ -1.69
GABRA1-213ENST00000636340 ZNF415Q09FC8 603 aa4.48□□□□□ -1.69
GABRA1-213ENST00000636340 Q1RN00 199 aa4.48□□□□□ -1.69
GABRA1-213ENST00000636340 Q6YL49 198 aa4.48□□□□□ -1.69
GABRA1-213ENST00000636340 TMEM61Q8N0U2 210 aa4.48□□□□□ -1.69
GABRA1-213ENST00000636340 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.48□□□□□ -1.69
GABRA1-213ENST00000636340 DNAJC30Q96LL9 226 aa4.48□□□□□ -1.69
GABRA1-213ENST00000636340 DUX3Q96PT4 197 aa4.48□□□□□ -1.69
GABRA1-213ENST00000636340 NIPBLQ6KC79 2804 aaeCLIP4.48□□□□□ -1.69
GABRA1-213ENST00000636340 TEX49A0A1B0GTD5 131 aa4.48□□□□□ -1.69
GABRA1-213ENST00000636340 RS1O15537 224 aa4.48□□□□□ -1.69
GABRA1-213ENST00000636340 DEFB136Q30KP8 78 aa4.48□□□□□ -1.69
GABRA1-213ENST00000636340 WFDC11Q8NEX6 87 aa4.48□□□□□ -1.69
GABRA1-213ENST00000636340 NDUFA1O15239 70 aa4.47□□□□□ -1.69
GABRA1-213ENST00000636340 CRLF1O75462 422 aa4.47□□□□□ -1.69
GABRA1-213ENST00000636340 Q8N2B8 174 aa4.47□□□□□ -1.69
GABRA1-213ENST00000636340 TMEM101Q96IK0 257 aa4.47□□□□□ -1.69
GABRA1-213ENST00000636340 MAP6D1Q9H9H5 199 aa4.47□□□□□ -1.69
GABRA1-213ENST00000636340 CDKN2A-AS1Q9UH64 79 aa4.47□□□□□ -1.69
GABRA1-213ENST00000636340 TRAV4A0A0B4J268 109 aa4.46□□□□□ -1.69
GABRA1-213ENST00000636340 IGHV3-38A0A0C4DH36 116 aa4.46□□□□□ -1.69
GABRA1-213ENST00000636340 IGLV5-39A0A0G2JS06 123 aa4.46□□□□□ -1.69
GABRA1-213ENST00000636340 H3BT86 120 aa4.46□□□□□ -1.69
GABRA1-213ENST00000636340 LST1O00453 97 aa4.46□□□□□ -1.69
GABRA1-213ENST00000636340 IFITM1P13164 125 aa4.46□□□□□ -1.69
GABRA1-213ENST00000636340 COX6A2Q02221 97 aa4.46□□□□□ -1.69
GABRA1-213ENST00000636340 DEFB113Q30KQ7 82 aa4.46□□□□□ -1.69
GABRA1-213ENST00000636340 DEFB121Q5J5C9 76 aa4.46□□□□□ -1.69
GABRA1-213ENST00000636340 KRTAP1-3Q8IUG1 177 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms