RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 LINC00173Q6ZV60 143 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 KIAA1109Q2LD37 5005 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 PRSS29PA6NIE9 313 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 HIST1H2BKO60814 126 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 HIST1H2BJP06899 126 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 HIST1H2BOP23527 126 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 HIST1H2BBP33778 126 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 HIST1H2BDP58876 126 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 HIST1H2BCP62807 126 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 ODF1Q14990 250 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 HIST2H2BEQ16778 126 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.67□□□□□ -1.5
CDKL5-209ENST00000635828 C2orf66Q6UXQ4 117 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 C6orf223Q8N319 242 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 HIST1H2BHQ93079 126 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 HIST1H2BNQ99877 126 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 HIST1H2BMQ99879 126 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 REG3AQ06141 175 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 C1orf134Q5TEV5 83 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 CDC42SE2Q9NRR3 84 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 DNAH8Q96JB1 4490 aa5.67□□□□□ -1.5
CDKL5-209ENST00000635828 PPP1R17O96001 155 aa5.66□□□□□ -1.5
CDKL5-209ENST00000635828 LAGE3Q14657 143 aa5.66□□□□□ -1.5
CDKL5-209ENST00000635828 AMMECR1LQ6DCA0 310 aa5.66□□□□□ -1.5
CDKL5-209ENST00000635828 IGKV2D-24A0A075B6R9 120 aa5.66□□□□□ -1.5
CDKL5-209ENST00000635828 LINC00614P0C842 121 aa5.66□□□□□ -1.5
CDKL5-209ENST00000635828 LAMTOR2Q9Y2Q5 125 aa5.66□□□□□ -1.5
CDKL5-209ENST00000635828 SERF1AO75920 110 aa5.66□□□□□ -1.5
CDKL5-209ENST00000635828 RPL32P62910 135 aaKnown RBP5.66□□□□□ -1.5
CDKL5-209ENST00000635828 KRTAP26-1Q6PEX3 210 aa5.66□□□□□ -1.5
CDKL5-209ENST00000635828 PRR34Q9NV39 138 aa5.66□□□□□ -1.5
CDKL5-209ENST00000635828 BAALCQ8WXS3 180 aa5.65□□□□□ -1.5
CDKL5-209ENST00000635828 TRAV13-1A0A0B4J241 112 aa5.65□□□□□ -1.5
CDKL5-209ENST00000635828 A0A1B0GUV1 79 aa5.65□□□□□ -1.5
CDKL5-209ENST00000635828 S100A6P06703 90 aa5.65□□□□□ -1.5
CDKL5-209ENST00000635828 PCP4P48539 62 aa5.65□□□□□ -1.5
CDKL5-209ENST00000635828 COX19Q49B96 90 aa5.65□□□□□ -1.5
CDKL5-209ENST00000635828 LINC01620Q4KN68 170 aa5.65□□□□□ -1.5
CDKL5-209ENST00000635828 IGLV4-3A0A075B6K6 122 aa5.65□□□□□ -1.51
CDKL5-209ENST00000635828 KRTAP10-2P60368 255 aa5.65□□□□□ -1.51
CDKL5-209ENST00000635828 NXT2Q9NPJ8 142 aaKnown RBP5.65□□□□□ -1.51
CDKL5-209ENST00000635828 CBY1Q9Y3M2 126 aa5.65□□□□□ -1.51
CDKL5-209ENST00000635828 IGIPA6NJ69 53 aa5.64□□□□□ -1.51
CDKL5-209ENST00000635828 XCL1P47992 114 aa5.64□□□□□ -1.51
CDKL5-209ENST00000635828 FA2HQ7L5A8 372 aa5.64□□□□□ -1.51
CDKL5-209ENST00000635828 ZNF664Q8N3J9 261 aa5.64□□□□□ -1.51
CDKL5-209ENST00000635828 LINC00526Q96FQ7 95 aa5.64□□□□□ -1.51
CDKL5-209ENST00000635828 PDZD11Q5EBL8 140 aa5.64□□□□□ -1.51
CDKL5-209ENST00000635828 AP5S1Q9NUS5 200 aa5.64□□□□□ -1.51
CDKL5-209ENST00000635828 APOBP04114 4563 aaKnown RBP5.64□□□□□ -1.51
CDKL5-209ENST00000635828 LINC01546A6NGU7 62 aa5.64□□□□□ -1.51
CDKL5-209ENST00000635828 COX6A2Q02221 97 aa5.64□□□□□ -1.51
CDKL5-209ENST00000635828 BAGE3Q86Y29 109 aa5.64□□□□□ -1.51
CDKL5-209ENST00000635828 OR5A1Q8NGJ0 315 aa5.64□□□□□ -1.51
CDKL5-209ENST00000635828 TMEM97Q5BJF2 176 aa5.63□□□□□ -1.51
CDKL5-209ENST00000635828 MRPL52Q86TS9 123 aaKnown RBP5.63□□□□□ -1.51
CDKL5-209ENST00000635828 LRCOL1A6NCL2 159 aa5.63□□□□□ -1.51
CDKL5-209ENST00000635828 TOMM6Q96B49 74 aa5.63□□□□□ -1.51
CDKL5-209ENST00000635828 LINC00959A0A1B0GUT2 108 aa5.63□□□□□ -1.51
CDKL5-209ENST00000635828 CRPP02741 224 aa5.63□□□□□ -1.51
CDKL5-209ENST00000635828 TTC32Q5I0X7 151 aa5.63□□□□□ -1.51
CDKL5-209ENST00000635828 DGAT2L7PQ6IED9 249 aa5.63□□□□□ -1.51
CDKL5-209ENST00000635828 TRAV9-2A0A087WT02 112 aa5.62□□□□□ -1.51
CDKL5-209ENST00000635828 CCL25O15444 150 aa5.62□□□□□ -1.51
CDKL5-209ENST00000635828 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.62□□□□□ -1.51
CDKL5-209ENST00000635828 ORMDL2Q53FV1 153 aa5.62□□□□□ -1.51
CDKL5-209ENST00000635828 CYSLTR1Q9Y271 337 aa5.62□□□□□ -1.51
CDKL5-209ENST00000635828 CHCHD10Q8WYQ3 142 aaPredicted RBP5.62□□□□□ -1.51
CDKL5-209ENST00000635828 GAGE12HA6NDE8 117 aa5.61□□□□□ -1.51
CDKL5-209ENST00000635828 H0Y8G0 127 aa5.61□□□□□ -1.51
CDKL5-209ENST00000635828 PSCAO43653 123 aa5.61□□□□□ -1.51
CDKL5-209ENST00000635828 FABP4P15090 132 aa5.61□□□□□ -1.51
CDKL5-209ENST00000635828 C10orf126Q8N4M7 172 aa5.61□□□□□ -1.51
CDKL5-209ENST00000635828 TMEM101Q96IK0 257 aa5.61□□□□□ -1.51
CDKL5-209ENST00000635828 SCGB3A1Q96QR1 104 aa5.61□□□□□ -1.51
CDKL5-209ENST00000635828 A0A1B0GVY2 172 aa5.61□□□□□ -1.51
CDKL5-209ENST00000635828 Q0VG73 95 aa5.61□□□□□ -1.51
CDKL5-209ENST00000635828 NDUFA6P56556 154 aa5.61□□□□□ -1.51
CDKL5-209ENST00000635828 FAT1Q14517 4588 aa5.61□□□□□ -1.51
CDKL5-209ENST00000635828 HSPG2P98160 4391 aa5.61□□□□□ -1.51
CDKL5-209ENST00000635828 FOXI1Q12951 378 aa5.6□□□□□ -1.51
CDKL5-209ENST00000635828 C5orf38Q86SI9 138 aa5.6□□□□□ -1.51
CDKL5-209ENST00000635828 C1orf43Q9BWL3 253 aa5.6□□□□□ -1.51
CDKL5-209ENST00000635828 A0A087WTM6 91 aa5.6□□□□□ -1.51
CDKL5-209ENST00000635828 TRAV8-3A0A0A6YYJ7 113 aa5.6□□□□□ -1.51
CDKL5-209ENST00000635828 H7C423 109 aa5.6□□□□□ -1.51
CDKL5-209ENST00000635828 ZNF25P17030 456 aaPredicted RBP5.6□□□□□ -1.51
CDKL5-209ENST00000635828 SPATA12Q7Z6I5 190 aa5.6□□□□□ -1.51
CDKL5-209ENST00000635828 NTN5Q8WTR8 489 aaPredicted RBP5.6□□□□□ -1.51
CDKL5-209ENST00000635828 TMEM141Q96I45 108 aa5.6□□□□□ -1.51
CDKL5-209ENST00000635828 CSDC2Q9Y534 153 aaKnown RBP5.6□□□□□ -1.51
CDKL5-209ENST00000635828 SLPIP03973 132 aa5.6□□□□□ -1.51
CDKL5-209ENST00000635828 HIGD2BQ4VC39 106 aa5.6□□□□□ -1.51
CDKL5-209ENST00000635828 PMCHL2Q9BQD1 86 aa5.6□□□□□ -1.51
CDKL5-209ENST00000635828 IFITM10A6NMD0 228 aa5.59□□□□□ -1.51
CDKL5-209ENST00000635828 HBDP02042 147 aa5.59□□□□□ -1.51
CDKL5-209ENST00000635828 HAMPP81172 84 aa5.59□□□□□ -1.51
CDKL5-209ENST00000635828 MIAQ16674 131 aa5.59□□□□□ -1.51
CDKL5-209ENST00000635828 LINC00242Q5T6M2 205 aa5.59□□□□□ -1.51
CDKL5-209ENST00000635828 A0A0J9YXV3 536 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms