RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 AP5S1Q9NUS5 200 aa5.58□□□□□ -1.52
MECP2-220ENST00000631210 KLK12Q9UKR0 248 aa5.58□□□□□ -1.52
MECP2-220ENST00000631210 PYGO1Q9Y3Y4 419 aa5.58□□□□□ -1.52
MECP2-220ENST00000631210 IGLV4-3A0A075B6K6 122 aa5.57□□□□□ -1.52
MECP2-220ENST00000631210 C1orf196B1AJZ1 125 aa5.57□□□□□ -1.52
MECP2-220ENST00000631210 ZNF25P17030 456 aaPredicted RBP5.57□□□□□ -1.52
MECP2-220ENST00000631210 MRPS36P82909 103 aaKnown RBP5.57□□□□□ -1.52
MECP2-220ENST00000631210 ZC2HC1BQ5TFG8 222 aa5.57□□□□□ -1.52
MECP2-220ENST00000631210 RNASEKQ6P5S7 137 aaKnown RBP5.57□□□□□ -1.52
MECP2-220ENST00000631210 BAGE3Q86Y29 109 aa5.57□□□□□ -1.52
MECP2-220ENST00000631210 LINC00269Q8N2A0 174 aa5.57□□□□□ -1.52
MECP2-220ENST00000631210 FAM19A2Q8N3H0 131 aa5.57□□□□□ -1.52
MECP2-220ENST00000631210 A0A087WX48 190 aa5.56□□□□□ -1.52
MECP2-220ENST00000631210 K7EP13 123 aa5.56□□□□□ -1.52
MECP2-220ENST00000631210 UBE2L6O14933 153 aa5.56□□□□□ -1.52
MECP2-220ENST00000631210 BTF3P20290 206 aaKnown RBP5.56□□□□□ -1.52
MECP2-220ENST00000631210 RAB5BP61020 215 aa5.56□□□□□ -1.52
MECP2-220ENST00000631210 PKIAP61925 76 aa5.56□□□□□ -1.52
MECP2-220ENST00000631210 RNASE13Q5GAN3 156 aaKnown RBP5.56□□□□□ -1.52
MECP2-220ENST00000631210 ZNF664Q8N3J9 261 aa5.56□□□□□ -1.52
MECP2-220ENST00000631210 MAPKAPK5-AS1Q8N8E1 139 aa5.56□□□□□ -1.52
MECP2-220ENST00000631210 AMELXQ99217 191 aa5.56□□□□□ -1.52
MECP2-220ENST00000631210 SPANXA1Q9NS26 97 aa5.56□□□□□ -1.52
MECP2-220ENST00000631210 CYSLTR1Q9Y271 337 aa5.56□□□□□ -1.52
MECP2-220ENST00000631210 PKD1P98161 4303 aa5.56□□□□□ -1.52
MECP2-220ENST00000631210 RTL8CO15255 209 aa5.55□□□□□ -1.52
MECP2-220ENST00000631210 HBDP02042 147 aa5.55□□□□□ -1.52
MECP2-220ENST00000631210 ANGP03950 147 aaKnown RBP5.55□□□□□ -1.52
MECP2-220ENST00000631210 TTC32Q5I0X7 151 aa5.55□□□□□ -1.52
MECP2-220ENST00000631210 CLPSL2Q6UWE3 100 aa5.55□□□□□ -1.52
MECP2-220ENST00000631210 ERASQ7Z444 233 aa5.55□□□□□ -1.52
MECP2-220ENST00000631210 OR5A1Q8NGJ0 315 aa5.55□□□□□ -1.52
MECP2-220ENST00000631210 TIMM17AQ99595 171 aa5.55□□□□□ -1.52
MECP2-220ENST00000631210 NPSP0C0P6 89 aa5.54□□□□□ -1.52
MECP2-220ENST00000631210 NDUFA6P56556 154 aa5.54□□□□□ -1.52
MECP2-220ENST00000631210 REG3AQ06141 175 aa5.54□□□□□ -1.52
MECP2-220ENST00000631210 AMMECR1LQ6DCA0 310 aa5.54□□□□□ -1.52
MECP2-220ENST00000631210 C10orf126Q8N4M7 172 aa5.54□□□□□ -1.52
MECP2-220ENST00000631210 UBE2WQ96B02 151 aa5.54□□□□□ -1.52
MECP2-220ENST00000631210 TMEM18Q96B42 140 aa5.54□□□□□ -1.52
MECP2-220ENST00000631210 SCGB3A1Q96QR1 104 aa5.54□□□□□ -1.52
MECP2-220ENST00000631210 TRAV9-2A0A087WT02 112 aa5.53□□□□□ -1.52
MECP2-220ENST00000631210 LINC00959A0A1B0GUT2 108 aa5.53□□□□□ -1.52
MECP2-220ENST00000631210 IFITM10A6NMD0 228 aa5.53□□□□□ -1.52
MECP2-220ENST00000631210 HSBP1O75506 76 aa5.53□□□□□ -1.52
MECP2-220ENST00000631210 C6orf223Q8N319 242 aa5.53□□□□□ -1.52
MECP2-220ENST00000631210 BAALCQ8WXS3 180 aa5.53□□□□□ -1.52
MECP2-220ENST00000631210 TMEM141Q96I45 108 aa5.53□□□□□ -1.52
MECP2-220ENST00000631210 Q9HAA7 133 aa5.53□□□□□ -1.52
MECP2-220ENST00000631210 IGLV10-54A0A075B6I4 117 aa5.52□□□□□ -1.53
MECP2-220ENST00000631210 PRSS29PA6NIE9 313 aa5.52□□□□□ -1.53
MECP2-220ENST00000631210 G0S2P27469 103 aa5.52□□□□□ -1.53
MECP2-220ENST00000631210 UBE2D1P51668 147 aa5.52□□□□□ -1.53
MECP2-220ENST00000631210 MIAQ16674 131 aa5.52□□□□□ -1.53
MECP2-220ENST00000631210 DGAT2L7PQ6IED9 249 aa5.52□□□□□ -1.53
MECP2-220ENST00000631210 FAM19A3Q7Z5A8 133 aa5.52□□□□□ -1.53
MECP2-220ENST00000631210 HIST3H2BBQ8N257 126 aa5.52□□□□□ -1.53
MECP2-220ENST00000631210 TMEM101Q96IK0 257 aa5.52□□□□□ -1.53
MECP2-220ENST00000631210 TRAV8-3A0A0A6YYJ7 113 aa5.51□□□□□ -1.53
MECP2-220ENST00000631210 IGKV3OR2-268A0A0C4DH90 116 aa5.51□□□□□ -1.53
MECP2-220ENST00000631210 LRCOL1A6NCL2 159 aa5.51□□□□□ -1.53
MECP2-220ENST00000631210 C5orf52A6NGY3 159 aa5.51□□□□□ -1.53
MECP2-220ENST00000631210 LINC01549A6NIU2 74 aa5.51□□□□□ -1.53
MECP2-220ENST00000631210 COX6A2Q02221 97 aa5.51□□□□□ -1.53
MECP2-220ENST00000631210 FOXI1Q12951 378 aa5.51□□□□□ -1.53
MECP2-220ENST00000631210 WFDC2Q14508 124 aa5.51□□□□□ -1.53
MECP2-220ENST00000631210 LINC00242Q5T6M2 205 aa5.51□□□□□ -1.53
MECP2-220ENST00000631210 C1orf134Q5TEV5 83 aa5.51□□□□□ -1.53
MECP2-220ENST00000631210 SPATA12Q7Z6I5 190 aa5.51□□□□□ -1.53
MECP2-220ENST00000631210 CST9LQ9H4G1 147 aa5.51□□□□□ -1.53
MECP2-220ENST00000631210 HECTD4Q9Y4D8 3996 aa5.5□□□□□ -1.53
MECP2-220ENST00000631210 IGLV4-69A0A075B6H9 119 aa5.5□□□□□ -1.53
MECP2-220ENST00000631210 TRAV13-1A0A0B4J241 112 aa5.5□□□□□ -1.53
MECP2-220ENST00000631210 TRAV8-4A0A0B4J246 113 aa5.5□□□□□ -1.53
MECP2-220ENST00000631210 IGHV3OR16-9A0A0B4J2B5 98 aa5.5□□□□□ -1.53
MECP2-220ENST00000631210 CCL25O15444 150 aa5.5□□□□□ -1.53
MECP2-220ENST00000631210 ATP5LO75964 103 aa5.5□□□□□ -1.53
MECP2-220ENST00000631210 FABP4P15090 132 aa5.5□□□□□ -1.53
MECP2-220ENST00000631210 TNP2Q05952 138 aa5.5□□□□□ -1.53
MECP2-220ENST00000631210 SMAGPQ0VAQ4 97 aa5.5□□□□□ -1.53
MECP2-220ENST00000631210 CHCHD10Q8WYQ3 142 aaPredicted RBP5.5□□□□□ -1.53
MECP2-220ENST00000631210 IFI27L1Q96BM0 104 aa5.5□□□□□ -1.53
MECP2-220ENST00000631210 PACRGQ96M98 296 aaPredicted RBP5.5□□□□□ -1.53
MECP2-220ENST00000631210 IGKV2D-24A0A075B6R9 120 aa5.49□□□□□ -1.53
MECP2-220ENST00000631210 A0A0J9YXV3 536 aa5.49□□□□□ -1.53
MECP2-220ENST00000631210 GAGE12HA6NDE8 117 aa5.49□□□□□ -1.53
MECP2-220ENST00000631210 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.49□□□□□ -1.53
MECP2-220ENST00000631210 LEPROTL1O95214 131 aa5.49□□□□□ -1.53
MECP2-220ENST00000631210 CRPP02741 224 aa5.49□□□□□ -1.53
MECP2-220ENST00000631210 SNRPEP62304 92 aaKnown RBP5.49□□□□□ -1.53
MECP2-220ENST00000631210 PMVKQ15126 192 aa5.49□□□□□ -1.53
MECP2-220ENST00000631210 TEX43Q6ZNM6 134 aa5.49□□□□□ -1.53
MECP2-220ENST00000631210 VCX2Q9H322 139 aa5.49□□□□□ -1.53
MECP2-220ENST00000631210 PKHD1P08F94 4074 aa5.49□□□□□ -1.53
MECP2-220ENST00000631210 DNAH5Q8TE73 4624 aa5.48□□□□□ -1.53
MECP2-220ENST00000631210 IGLV5-45A0A087WSX0 123 aa5.48□□□□□ -1.53
MECP2-220ENST00000631210 TRAV12-1A0A0B4J245 112 aa5.48□□□□□ -1.53
MECP2-220ENST00000631210 XCL1P47992 114 aa5.48□□□□□ -1.53
MECP2-220ENST00000631210 ODF1Q14990 250 aa5.48□□□□□ -1.53
MECP2-220ENST00000631210 CD164L2Q6UWJ8 174 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms