RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 ZFAND3Q9H8U3 227 aa6.67□□□□□ -1.34
VCL-206ENST00000623461 SLPIP03973 132 aa6.67□□□□□ -1.34
VCL-206ENST00000623461 SLURP1P55000 103 aa6.67□□□□□ -1.34
VCL-206ENST00000623461 DEFB1P60022 68 aa6.67□□□□□ -1.34
VCL-206ENST00000623461 DEFB113Q30KQ7 82 aa6.67□□□□□ -1.34
VCL-206ENST00000623461 DEFB112Q30KQ8 113 aa6.67□□□□□ -1.34
VCL-206ENST00000623461 IGKV2D-24A0A075B6R9 120 aa6.67□□□□□ -1.34
VCL-206ENST00000623461 TSHBP01222 138 aa6.67□□□□□ -1.34
VCL-206ENST00000623461 IGLV10-54A0A075B6I4 117 aa6.67□□□□□ -1.34
VCL-206ENST00000623461 CCKP06307 115 aa6.67□□□□□ -1.34
VCL-206ENST00000623461 SIRPDQ9H106 197 aa6.67□□□□□ -1.34
VCL-206ENST00000623461 SNURFQ9Y675 71 aa6.67□□□□□ -1.34
VCL-206ENST00000623461 IGHV4-59P01825 116 aa6.66□□□□□ -1.34
VCL-206ENST00000623461 FAM19A3Q7Z5A8 133 aa6.66□□□□□ -1.34
VCL-206ENST00000623461 DOPEY1Q5JWR5 2465 aa6.66□□□□□ -1.34
VCL-206ENST00000623461 TRBV7-7A0A0K0K1E9 115 aa6.66□□□□□ -1.34
VCL-206ENST00000623461 IGIPA6NJ69 53 aa6.66□□□□□ -1.34
VCL-206ENST00000623461 PLA2G2CQ5R387 149 aa6.66□□□□□ -1.34
VCL-206ENST00000623461 MIFP14174 115 aa6.64□□□□□ -1.35
VCL-206ENST00000623461 SEM1Q6ZVN7 128 aa6.64□□□□□ -1.35
VCL-206ENST00000623461 LY6LH3BQJ8 138 aa6.64□□□□□ -1.35
VCL-206ENST00000623461 CRIP2P52943 208 aaPredicted RBP6.64□□□□□ -1.35
VCL-206ENST00000623461 COX8CQ7Z4L0 72 aa6.64□□□□□ -1.35
VCL-206ENST00000623461 EBI3Q14213 229 aa6.64□□□□□ -1.35
VCL-206ENST00000623461 IGF2-ASQ6U949 168 aa6.64□□□□□ -1.35
VCL-206ENST00000623461 CLPSL1A2RUU4 121 aa6.64□□□□□ -1.35
VCL-206ENST00000623461 SMIM11BQ8TCY0 68 aa6.64□□□□□ -1.35
VCL-206ENST00000623461 RNASE3P12724 160 aaKnown RBP6.64□□□□□ -1.35
VCL-206ENST00000623461 RAI1Q7Z5J4 1906 aaPredicted RBP6.64□□□□□ -1.35
VCL-206ENST00000623461 A0A096LNJ9 63 aa6.63□□□□□ -1.35
VCL-206ENST00000623461 IGHV4-38-2P0DP08 117 aa6.63□□□□□ -1.35
VCL-206ENST00000623461 CACNA1AO00555 2505 aa6.63□□□□□ -1.35
VCL-206ENST00000623461 AGRNO00468 2067 aa6.63□□□□□ -1.35
VCL-206ENST00000623461 K7EQG2 157 aa6.63□□□□□ -1.35
VCL-206ENST00000623461 IGF1P05019 195 aa6.63□□□□□ -1.35
VCL-206ENST00000623461 RPS28P62857 69 aaKnown RBP6.63□□□□□ -1.35
VCL-206ENST00000623461 DAZAP2Q15038 168 aaPredicted RBP6.63□□□□□ -1.35
VCL-206ENST00000623461 GAS8-AS1O95177 125 aa6.63□□□□□ -1.35
VCL-206ENST00000623461 DEFB136Q30KP8 78 aa6.63□□□□□ -1.35
VCL-206ENST00000623461 SCXQ7RTU7 201 aa6.63□□□□□ -1.35
VCL-206ENST00000623461 UBE2D4Q9Y2X8 147 aa6.63□□□□□ -1.35
VCL-206ENST00000623461 IGLV4-69A0A075B6H9 119 aa6.63□□□□□ -1.35
VCL-206ENST00000623461 PSMG3-AS1Q96PY0 264 aa6.63□□□□□ -1.35
VCL-206ENST00000623461 C11orf21Q9P2W6 132 aa6.63□□□□□ -1.35
VCL-206ENST00000623461 DSCAML1Q8TD84 2053 aa6.62□□□□□ -1.35
VCL-206ENST00000623461 A6NDX4 124 aa6.62□□□□□ -1.35
VCL-206ENST00000623461 SHISA2Q6UWI4 295 aa6.62□□□□□ -1.35
VCL-206ENST00000623461 C4orf3Q8WVX3 66 aa6.62□□□□□ -1.35
VCL-206ENST00000623461 UBE2AP49459 152 aa6.62□□□□□ -1.35
VCL-206ENST00000623461 PRO0255Q9UI72 69 aa6.62□□□□□ -1.35
VCL-206ENST00000623461 ZFP36P26651 326 aaKnown RBP6.62□□□□□ -1.35
VCL-206ENST00000623461 MAP6D1Q9H9H5 199 aa6.62□□□□□ -1.35
VCL-206ENST00000623461 RPL28P46779 137 aaKnown RBP6.61□□□□□ -1.35
VCL-206ENST00000623461 PPDPFQ9H3Y8 114 aa6.61□□□□□ -1.35
VCL-206ENST00000623461 C9orf85Q96MD7 179 aa6.61□□□□□ -1.35
VCL-206ENST00000623461 PRO0628Q9UI54 55 aa6.61□□□□□ -1.35
VCL-206ENST00000623461 C6orf99Q4VX62 202 aa6.61□□□□□ -1.35
VCL-206ENST00000623461 K7ERS5 55 aa6.61□□□□□ -1.35
VCL-206ENST00000623461 MUC7Q8TAX7 377 aa6.61□□□□□ -1.35
VCL-206ENST00000623461 KLLNB2CW77 178 aa6.6□□□□□ -1.35
VCL-206ENST00000623461 LOC107984640A0A0U1RRK4 108 aa6.6□□□□□ -1.35
VCL-206ENST00000623461 LINC01546A6NGU7 62 aa6.6□□□□□ -1.35
VCL-206ENST00000623461 PIP4P1Q86T03 277 aa6.6□□□□□ -1.35
VCL-206ENST00000623461 POM121L12Q8N7R1 296 aa6.6□□□□□ -1.35
VCL-206ENST00000623461 PRR15LQ9BU68 103 aa6.6□□□□□ -1.35
VCL-206ENST00000623461 ADAMTS20P59510 1910 aa6.6□□□□□ -1.35
VCL-206ENST00000623461 B9D2Q9BPU9 175 aa6.6□□□□□ -1.35
VCL-206ENST00000623461 IGLV2-18A0A075B6J9 118 aa6.59□□□□□ -1.35
VCL-206ENST00000623461 IGHV4-61A0A0C4DH41 118 aa6.59□□□□□ -1.35
VCL-206ENST00000623461 A8MZ25 164 aa6.59□□□□□ -1.35
VCL-206ENST00000623461 COX17Q14061 63 aa6.59□□□□□ -1.35
VCL-206ENST00000623461 TECTAO75443 2155 aa6.59□□□□□ -1.35
VCL-206ENST00000623461 A6NED7 52 aa6.59□□□□□ -1.35
VCL-206ENST00000623461 CRYGDP07320 174 aa6.59□□□□□ -1.35
VCL-206ENST00000623461 CRYGAP11844 174 aa6.59□□□□□ -1.35
VCL-206ENST00000623461 H0Y9J4 135 aa6.58□□□□□ -1.36
VCL-206ENST00000623461 TRBV6-4A0A1B0GX49 114 aa6.58□□□□□ -1.36
VCL-206ENST00000623461 REG3AQ06141 175 aa6.58□□□□□ -1.36
VCL-206ENST00000623461 PRR9Q5T870 116 aa6.58□□□□□ -1.36
VCL-206ENST00000623461 TRBV6-8A0A0A6YYG3 113 aa6.58□□□□□ -1.36
VCL-206ENST00000623461 CHCHD10Q8WYQ3 142 aaPredicted RBP6.58□□□□□ -1.36
VCL-206ENST00000623461 TSPEAR-AS2P59090 65 aa6.58□□□□□ -1.36
VCL-206ENST00000623461 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.58□□□□□ -1.36
VCL-206ENST00000623461 GRNP28799 593 aaKnown RBP6.58□□□□□ -1.36
VCL-206ENST00000623461 FBXL19-AS1Q494R0 122 aa6.58□□□□□ -1.36
VCL-206ENST00000623461 KLK12Q9UKR0 248 aa6.58□□□□□ -1.36
VCL-206ENST00000623461 Q6ZTI0 123 aa6.57□□□□□ -1.36
VCL-206ENST00000623461 MAPK1IP1LQ8NDC0 245 aa6.57□□□□□ -1.36
VCL-206ENST00000623461 PRO0461Q9UI25 63 aa6.57□□□□□ -1.36
VCL-206ENST00000623461 LINC00269Q8N2A0 174 aa6.57□□□□□ -1.36
VCL-206ENST00000623461 C7orf33Q8WU49 177 aa6.57□□□□□ -1.36
VCL-206ENST00000623461 F8W735 103 aaPredicted RBP6.56□□□□□ -1.36
VCL-206ENST00000623461 CUL9Q8IWT3 2517 aa6.56□□□□□ -1.36
VCL-206ENST00000623461 PRORYQ9H606 182 aa6.56□□□□□ -1.36
VCL-206ENST00000623461 PRYO14603 147 aa6.56□□□□□ -1.36
VCL-206ENST00000623461 LINC01548A6NM66 108 aa6.56□□□□□ -1.36
VCL-206ENST00000623461 NTM-AS1Q6ZSK4 140 aa6.56□□□□□ -1.36
VCL-206ENST00000623461 BDP1A6H8Y1 2624 aa6.56□□□□□ -1.36
VCL-206ENST00000623461 Q6ZQY7 126 aa6.56□□□□□ -1.36
VCL-206ENST00000623461 ZFYVE26Q68DK2 2539 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms