RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 UQCR10Q9UDW1 63 aa6.56□□□□□ -1.36
HDAC9-229ENST00000622668 RPL24P83731 157 aaKnown RBP6.56□□□□□ -1.36
HDAC9-229ENST00000622668 TMEM126AQ9H061 195 aa6.56□□□□□ -1.36
HDAC9-229ENST00000622668 SPEGQ15772 3267 aa6.56□□□□□ -1.36
HDAC9-229ENST00000622668 SAMD5Q5TGI4 173 aa6.56□□□□□ -1.36
HDAC9-229ENST00000622668 ZNF664Q8N3J9 261 aa6.56□□□□□ -1.36
HDAC9-229ENST00000622668 FABP2P12104 132 aa6.55□□□□□ -1.36
HDAC9-229ENST00000622668 RNASE3P12724 160 aaKnown RBP6.55□□□□□ -1.36
HDAC9-229ENST00000622668 LYPD6BQ8NI32 183 aa6.55□□□□□ -1.36
HDAC9-229ENST00000622668 C11orf21Q9P2W6 132 aa6.55□□□□□ -1.36
HDAC9-229ENST00000622668 CELA1Q9UNI1 258 aa6.55□□□□□ -1.36
HDAC9-229ENST00000622668 C19orf71A6NCJ1 209 aa6.55□□□□□ -1.36
HDAC9-229ENST00000622668 CRYBA4P53673 196 aa6.55□□□□□ -1.36
HDAC9-229ENST00000622668 STAB2Q8WWQ8 2551 aa6.55□□□□□ -1.36
HDAC9-229ENST00000622668 TSPAN13O95857 204 aa6.55□□□□□ -1.36
HDAC9-229ENST00000622668 CRIP1P50238 77 aa6.55□□□□□ -1.36
HDAC9-229ENST00000622668 KRTAP10-11P60412 298 aa6.55□□□□□ -1.36
HDAC9-229ENST00000622668 STPG4Q8N801 248 aa6.55□□□□□ -1.36
HDAC9-229ENST00000622668 OPRPNQ99935 248 aaPredicted RBP6.55□□□□□ -1.36
HDAC9-229ENST00000622668 PGPEP1Q9NXJ5 209 aa6.55□□□□□ -1.36
HDAC9-229ENST00000622668 UTP20O75691 2785 aaKnown RBP6.54□□□□□ -1.36
HDAC9-229ENST00000622668 APCP25054 2843 aa6.54□□□□□ -1.36
HDAC9-229ENST00000622668 F8VRH5 84 aa6.54□□□□□ -1.36
HDAC9-229ENST00000622668 UBE2AP49459 152 aa6.54□□□□□ -1.36
HDAC9-229ENST00000622668 A0A1B0GV72 72 aa6.54□□□□□ -1.36
HDAC9-229ENST00000622668 SYS1-DBNDD2H3BUS1 97 aa6.54□□□□□ -1.36
HDAC9-229ENST00000622668 MIAQ16674 131 aa6.54□□□□□ -1.36
HDAC9-229ENST00000622668 TDRG1Q3Y452 100 aa6.54□□□□□ -1.36
HDAC9-229ENST00000622668 C20orf203Q8NBC4 194 aa6.54□□□□□ -1.36
HDAC9-229ENST00000622668 CRYBG3Q68DQ2 2970 aa6.54□□□□□ -1.36
HDAC9-229ENST00000622668 Q6ZUT4 128 aa6.54□□□□□ -1.36
HDAC9-229ENST00000622668 ESDP10768 282 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 C12orf74Q32Q52 190 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 RNASE8Q8TDE3 154 aaKnown RBP6.53□□□□□ -1.36
HDAC9-229ENST00000622668 MLST8Q9BVC4 326 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 A0A087WZ39 114 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 ETDCA0A1B0GVM5 59 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 C3orf79P0CE67 100 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 TIMM17AQ99595 171 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 LINC00467Q9BRT7 94 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 TAL2Q16559 108 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 C7orf33Q8WU49 177 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 BAALCQ8WXS3 180 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 LINC00526Q96FQ7 95 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 NHP2Q9NX24 153 aaKnown RBP6.53□□□□□ -1.36
HDAC9-229ENST00000622668 COLCA2A8K830 154 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 K7EMI3 77 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 MAJINQ3KP22 176 aa6.53□□□□□ -1.36
HDAC9-229ENST00000622668 IGLC6P0CF74 106 aa6.52□□□□□ -1.37
HDAC9-229ENST00000622668 NIPBLQ6KC79 2804 aaeCLIP6.52□□□□□ -1.37
HDAC9-229ENST00000622668 MUC3AQ02505 3323 aa6.52□□□□□ -1.37
HDAC9-229ENST00000622668 J3QR89 54 aa6.52□□□□□ -1.37
HDAC9-229ENST00000622668 M0QY20 66 aa6.52□□□□□ -1.37
HDAC9-229ENST00000622668 SOCS3O14543 225 aa6.52□□□□□ -1.37
HDAC9-229ENST00000622668 MRPS12O15235 138 aaKnown RBP6.52□□□□□ -1.37
HDAC9-229ENST00000622668 RBMY1FQ15415 496 aaKnown RBP6.52□□□□□ -1.37
HDAC9-229ENST00000622668 MPV17L2Q567V2 206 aa6.51□□□□□ -1.37
HDAC9-229ENST00000622668 SCRT2Q9NQ03 307 aa6.51□□□□□ -1.37
HDAC9-229ENST00000622668 LAMTOR3Q9UHA4 124 aa6.51□□□□□ -1.37
HDAC9-229ENST00000622668 J3QQQ9 107 aa6.51□□□□□ -1.37
HDAC9-229ENST00000622668 C4orf48Q5BLP8 95 aa6.51□□□□□ -1.37
HDAC9-229ENST00000622668 IGLV5-52A0A0A0MRZ9 124 aa6.5□□□□□ -1.37
HDAC9-229ENST00000622668 IGLV2-11P01706 119 aa6.5□□□□□ -1.37
HDAC9-229ENST00000622668 IGLV2-8P01709 118 aa6.5□□□□□ -1.37
HDAC9-229ENST00000622668 SYCNQ0VAF6 134 aa6.5□□□□□ -1.37
HDAC9-229ENST00000622668 COX7B2Q8TF08 81 aa6.5□□□□□ -1.37
HDAC9-229ENST00000622668 TRAV8-4A0A0B4J246 113 aa6.5□□□□□ -1.37
HDAC9-229ENST00000622668 C9orf85Q96MD7 179 aa6.5□□□□□ -1.37
HDAC9-229ENST00000622668 KMT2BQ9UMN6 2715 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-229ENST00000622668 CR1P17927 2039 aa6.5□□□□□ -1.37
HDAC9-229ENST00000622668 IGHV1-58A0A0C4DH39 117 aa6.5□□□□□ -1.37
HDAC9-229ENST00000622668 CDK2AP2O75956 126 aa6.5□□□□□ -1.37
HDAC9-229ENST00000622668 POM121L12Q8N7R1 296 aa6.5□□□□□ -1.37
HDAC9-229ENST00000622668 CARD19Q96LW7 228 aa6.5□□□□□ -1.37
HDAC9-229ENST00000622668 WFDC10BQ8IUB3 73 aa6.5□□□□□ -1.37
HDAC9-229ENST00000622668 FHL2Q14192 279 aa6.49□□□□□ -1.37
HDAC9-229ENST00000622668 SMIM6P0DI80 62 aa6.49□□□□□ -1.37
HDAC9-229ENST00000622668 HIST1H2BLQ99880 126 aa6.49□□□□□ -1.37
HDAC9-229ENST00000622668 ERG28Q9UKR5 140 aa6.49□□□□□ -1.37
HDAC9-229ENST00000622668 USP34Q70CQ2 3546 aa6.49□□□□□ -1.37
HDAC9-229ENST00000622668 SNHG12Q9BXW3 62 aa6.48□□□□□ -1.37
HDAC9-229ENST00000622668 C3orf84H3BNL1 204 aa6.48□□□□□ -1.37
HDAC9-229ENST00000622668 GTF2H5Q6ZYL4 71 aa6.48□□□□□ -1.37
HDAC9-229ENST00000622668 DEFB105AQ8NG35 78 aa6.48□□□□□ -1.37
HDAC9-229ENST00000622668 HIGD2AQ9BW72 106 aa6.47□□□□□ -1.37
HDAC9-229ENST00000622668 NDUFS6O75380 124 aaKnown RBP6.47□□□□□ -1.37
HDAC9-229ENST00000622668 XAGE1AQ9HD64 81 aa6.47□□□□□ -1.37
HDAC9-229ENST00000622668 CXCL5P42830 114 aa6.47□□□□□ -1.37
HDAC9-229ENST00000622668 FAM19A5Q7Z5A7 132 aaPredicted RBP6.47□□□□□ -1.37
HDAC9-229ENST00000622668 X6R8D5 127 aa6.47□□□□□ -1.37
HDAC9-229ENST00000622668 CTAG1AP78358 180 aa6.47□□□□□ -1.37
HDAC9-229ENST00000622668 LYPD5Q6UWN5 251 aa6.47□□□□□ -1.37
HDAC9-229ENST00000622668 UBE2D3P61077 147 aa6.46□□□□□ -1.37
HDAC9-229ENST00000622668 UBE2D2P62837 147 aa6.46□□□□□ -1.37
HDAC9-229ENST00000622668 LINC00518Q8N0U6 118 aa6.46□□□□□ -1.37
HDAC9-229ENST00000622668 LOC400499M0QZD8 3231 aa6.46□□□□□ -1.38
HDAC9-229ENST00000622668 ASH1LQ9NR48 2969 aaKnown RBP6.45□□□□□ -1.38
HDAC9-229ENST00000622668 HERV-K104P63124 156 aa6.45□□□□□ -1.38
HDAC9-229ENST00000622668 HIST3H2BBQ8N257 126 aa6.45□□□□□ -1.38
HDAC9-229ENST00000622668 DAND5Q8N907 189 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms