RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 GAGE12GP0CL81 117 aa9.4□□□□□ -0.9
AGAP3-226ENST00000622464 GAGE12IP0CL82 117 aa9.4□□□□□ -0.9
AGAP3-226ENST00000622464 LOC107984156A0A0G2JMH3 177 aa9.4□□□□□ -0.9
AGAP3-226ENST00000622464 PSMB2P49721 201 aa9.4□□□□□ -0.9
AGAP3-226ENST00000622464 ARL17AQ8IVW1 177 aa9.4□□□□□ -0.9
AGAP3-226ENST00000622464 LINC00467Q9BRT7 94 aa9.4□□□□□ -0.9
AGAP3-226ENST00000622464 LOC100131303A0A0U1RQF7 123 aa9.4□□□□□ -0.91
AGAP3-226ENST00000622464 MYMXA0A1B0GTQ4 84 aa9.4□□□□□ -0.91
AGAP3-226ENST00000622464 A8MZ25 164 aa9.4□□□□□ -0.91
AGAP3-226ENST00000622464 LINC00482Q8N8I6 264 aa9.4□□□□□ -0.91
AGAP3-226ENST00000622464 CARD19Q96LW7 228 aa9.4□□□□□ -0.91
AGAP3-226ENST00000622464 C19orf73Q9NVV2 129 aa9.4□□□□□ -0.91
AGAP3-226ENST00000622464 RPL32P62910 135 aaKnown RBP9.39□□□□□ -0.91
AGAP3-226ENST00000622464 TRAV25A0A0B4J276 109 aa9.39□□□□□ -0.91
AGAP3-226ENST00000622464 NDUFA7O95182 113 aa9.39□□□□□ -0.91
AGAP3-226ENST00000622464 SMIM20Q8N5G0 67 aa9.39□□□□□ -0.91
AGAP3-226ENST00000622464 FAM104AQ969W3 186 aa9.39□□□□□ -0.91
AGAP3-226ENST00000622464 TIMM17AQ99595 171 aa9.39□□□□□ -0.91
AGAP3-226ENST00000622464 GAGE12JA6NER3 117 aa9.38□□□□□ -0.91
AGAP3-226ENST00000622464 GAGE4Q13068 117 aa9.38□□□□□ -0.91
AGAP3-226ENST00000622464 SPXQ9BT56 116 aa9.38□□□□□ -0.91
AGAP3-226ENST00000622464 VCX2Q9H322 139 aa9.38□□□□□ -0.91
AGAP3-226ENST00000622464 TRBV20-1A0A075B6N2 111 aa9.38□□□□□ -0.91
AGAP3-226ENST00000622464 TMEM141Q96I45 108 aa9.38□□□□□ -0.91
AGAP3-226ENST00000622464 TRAV8-3A0A0A6YYJ7 113 aa9.37□□□□□ -0.91
AGAP3-226ENST00000622464 RHOHQ15669 191 aa9.37□□□□□ -0.91
AGAP3-226ENST00000622464 STAB1Q9NY15 2570 aa9.37□□□□□ -0.91
AGAP3-226ENST00000622464 LINC01549A6NIU2 74 aa9.37□□□□□ -0.91
AGAP3-226ENST00000622464 NHLRC4P0CG21 123 aaPredicted RBP9.37□□□□□ -0.91
AGAP3-226ENST00000622464 ZFAND6Q6FIF0 208 aa9.37□□□□□ -0.91
AGAP3-226ENST00000622464 CITED1Q99966 193 aa9.37□□□□□ -0.91
AGAP3-226ENST00000622464 CHCHD7Q9BUK0 85 aa9.37□□□□□ -0.91
AGAP3-226ENST00000622464 TRBV7-3A0A075B6L6 115 aa9.36□□□□□ -0.91
AGAP3-226ENST00000622464 TRGV2A0A075B6R0 118 aa9.36□□□□□ -0.91
AGAP3-226ENST00000622464 DEFB4AO15263 64 aa9.36□□□□□ -0.91
AGAP3-226ENST00000622464 RS1O15537 224 aa9.36□□□□□ -0.91
AGAP3-226ENST00000622464 LINC00694P0DN24 101 aa9.36□□□□□ -0.91
AGAP3-226ENST00000622464 SLC25A29Q8N8R3 303 aa9.36□□□□□ -0.91
AGAP3-226ENST00000622464 DEFB130BP0DP73 79 aa9.35□□□□□ -0.91
AGAP3-226ENST00000622464 DEFB130AP0DP74 79 aa9.35□□□□□ -0.91
AGAP3-226ENST00000622464 ZNF22P17026 224 aaPredicted RBP9.35□□□□□ -0.91
AGAP3-226ENST00000622464 SRSF9Q13242 221 aaKnown RBP eCLIP9.35□□□□□ -0.91
AGAP3-226ENST00000622464 TAL2Q16559 108 aa9.35□□□□□ -0.91
AGAP3-226ENST00000622464 BEAN1Q3B7T3 259 aa9.35□□□□□ -0.91
AGAP3-226ENST00000622464 ATP6V0E2Q8NHE4 81 aa9.35□□□□□ -0.91
AGAP3-226ENST00000622464 PLAC8L1A1L4L8 177 aa9.34□□□□□ -0.91
AGAP3-226ENST00000622464 CCDC179H3BU77 68 aa9.34□□□□□ -0.91
AGAP3-226ENST00000622464 TMEM263Q8WUH6 116 aaKnown RBP9.34□□□□□ -0.91
AGAP3-226ENST00000622464 PPDPFLQ8WWR9 84 aa9.34□□□□□ -0.91
AGAP3-226ENST00000622464 PKD1L1Q8TDX9 2849 aa9.34□□□□□ -0.91
AGAP3-226ENST00000622464 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.33□□□□□ -0.92
AGAP3-226ENST00000622464 UBE2D4Q9Y2X8 147 aa9.33□□□□□ -0.92
AGAP3-226ENST00000622464 MAST4O15021 2626 aa9.33□□□□□ -0.92
AGAP3-226ENST00000622464 J3QQQ9 107 aa9.33□□□□□ -0.92
AGAP3-226ENST00000622464 CRLF1O75462 422 aa9.33□□□□□ -0.92
AGAP3-226ENST00000622464 HERVK_113P61574 105 aa9.33□□□□□ -0.92
AGAP3-226ENST00000622464 RHODO00212 210 aa9.32□□□□□ -0.92
AGAP3-226ENST00000622464 TEN1Q86WV5 123 aa9.32□□□□□ -0.92
AGAP3-226ENST00000622464 IGKV3OR2-268A0A0C4DH90 116 aa9.32□□□□□ -0.92
AGAP3-226ENST00000622464 NPC2P61916 151 aa9.32□□□□□ -0.92
AGAP3-226ENST00000622464 CSNK1G2-AS1Q8NCQ2 148 aa9.32□□□□□ -0.92
AGAP3-226ENST00000622464 IL17DQ8TAD2 202 aa9.32□□□□□ -0.92
AGAP3-226ENST00000622464 LGALS3P17931 250 aaKnown RBP9.31□□□□□ -0.92
AGAP3-226ENST00000622464 NTM-AS1Q6ZSK4 140 aa9.31□□□□□ -0.92
AGAP3-226ENST00000622464 NDUFA11Q86Y39 141 aa9.31□□□□□ -0.92
AGAP3-226ENST00000622464 FBN1P35555 2871 aaKnown RBP9.31□□□□□ -0.92
AGAP3-226ENST00000622464 K7EQD1 137 aa9.31□□□□□ -0.92
AGAP3-226ENST00000622464 DGAT2L7PQ6IED9 249 aa9.31□□□□□ -0.92
AGAP3-226ENST00000622464 A0A096LPF7 62 aa9.3□□□□□ -0.92
AGAP3-226ENST00000622464 TRAV4A0A0B4J268 109 aa9.3□□□□□ -0.92
AGAP3-226ENST00000622464 A0A0J9YY99 117 aa9.3□□□□□ -0.92
AGAP3-226ENST00000622464 TMEM223A0PJW6 202 aa9.3□□□□□ -0.92
AGAP3-226ENST00000622464 TCL1BO95988 128 aa9.3□□□□□ -0.92
AGAP3-226ENST00000622464 ANKRD29Q8N6D5 301 aa9.3□□□□□ -0.92
AGAP3-226ENST00000622464 FAM110AQ9BQ89 295 aa9.3□□□□□ -0.92
AGAP3-226ENST00000622464 TRAV13-1A0A0B4J241 112 aa9.3□□□□□ -0.92
AGAP3-226ENST00000622464 AMELXQ99217 191 aa9.3□□□□□ -0.92
AGAP3-226ENST00000622464 TRGV4A0A0C4DH28 118 aa9.29□□□□□ -0.92
AGAP3-226ENST00000622464 NDUFV3P56181 108 aaKnown RBP9.29□□□□□ -0.92
AGAP3-226ENST00000622464 COX6A2Q02221 97 aa9.29□□□□□ -0.92
AGAP3-226ENST00000622464 GAGE2BQ13066 116 aa9.29□□□□□ -0.92
AGAP3-226ENST00000622464 GAGE2EQ4V326 116 aa9.29□□□□□ -0.92
AGAP3-226ENST00000622464 GAGE2DQ9UEU5 116 aa9.29□□□□□ -0.92
AGAP3-226ENST00000622464 A0A0U1RRA0 63 aa9.28□□□□□ -0.92
AGAP3-226ENST00000622464 RPL36AP83881 106 aaKnown RBP9.28□□□□□ -0.92
AGAP3-226ENST00000622464 DEFB135Q30KP9 77 aa9.28□□□□□ -0.92
AGAP3-226ENST00000622464 PAPPA-AS1Q5QFB9 102 aa9.28□□□□□ -0.92
AGAP3-226ENST00000622464 RPL36ALQ969Q0 106 aaKnown RBP9.28□□□□□ -0.92
AGAP3-226ENST00000622464 IGHV3-30-3P0DP02 117 aa9.28□□□□□ -0.92
AGAP3-226ENST00000622464 C10orf126Q8N4M7 172 aa9.28□□□□□ -0.92
AGAP3-226ENST00000622464 CDKN2A-AS1Q9UH64 79 aa9.28□□□□□ -0.92
AGAP3-226ENST00000622464 H7C2G1 150 aa9.27□□□□□ -0.92
AGAP3-226ENST00000622464 DAND5Q8N907 189 aa9.27□□□□□ -0.92
AGAP3-226ENST00000622464 C16orf74Q96GX8 76 aa9.27□□□□□ -0.92
AGAP3-226ENST00000622464 ZNF625Q96I27 306 aaPredicted RBP9.27□□□□□ -0.92
AGAP3-226ENST00000622464 TTC32Q5I0X7 151 aa9.27□□□□□ -0.93
AGAP3-226ENST00000622464 C3orf56Q8N813 242 aa9.27□□□□□ -0.93
AGAP3-226ENST00000622464 TIMM21Q9BVV7 248 aa9.27□□□□□ -0.93
AGAP3-226ENST00000622464 EDA2RQ9HAV5 297 aa9.27□□□□□ -0.93
AGAP3-226ENST00000622464 SCGB1C2P0DMR2 95 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms