RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 TMEM223A0PJW6 202 aa9.73□□□□□ -0.85
SIRPA-204ENST00000622179 DEFB121Q5J5C9 76 aa9.73□□□□□ -0.85
SIRPA-204ENST00000622179 ATMQ13315 3056 aa9.73□□□□□ -0.85
SIRPA-204ENST00000622179 IGIPA6NJ69 53 aa9.73□□□□□ -0.85
SIRPA-204ENST00000622179 TRAV4A0A0B4J268 109 aa9.73□□□□□ -0.85
SIRPA-204ENST00000622179 BRI3O95415 125 aa9.73□□□□□ -0.85
SIRPA-204ENST00000622179 TRBV10-1A0A0K0K1A3 114 aa9.72□□□□□ -0.85
SIRPA-204ENST00000622179 GAGE2AQ6NT46 116 aa9.72□□□□□ -0.85
SIRPA-204ENST00000622179 ICOSQ9Y6W8 199 aa9.72□□□□□ -0.85
SIRPA-204ENST00000622179 G3V4G9 280 aa9.72□□□□□ -0.85
SIRPA-204ENST00000622179 C9orf66Q5T8R8 295 aa9.72□□□□□ -0.85
SIRPA-204ENST00000622179 TCL1BO95988 128 aa9.72□□□□□ -0.85
SIRPA-204ENST00000622179 IFITM1P13164 125 aa9.72□□□□□ -0.85
SIRPA-204ENST00000622179 RPL32P62910 135 aaKnown RBP9.72□□□□□ -0.85
SIRPA-204ENST00000622179 ANKRD29Q8N6D5 301 aa9.72□□□□□ -0.85
SIRPA-204ENST00000622179 MUC3AQ02505 3323 aa9.71□□□□□ -0.85
SIRPA-204ENST00000622179 CFAP47Q6ZTR5 3102 aa9.71□□□□□ -0.86
SIRPA-204ENST00000622179 TINCRA0A1B0GVN0 87 aa9.71□□□□□ -0.86
SIRPA-204ENST00000622179 CLEC2BQ92478 149 aa9.71□□□□□ -0.86
SIRPA-204ENST00000622179 LINC01620Q4KN68 170 aa9.7□□□□□ -0.86
SIRPA-204ENST00000622179 TEN1Q86WV5 123 aa9.7□□□□□ -0.86
SIRPA-204ENST00000622179 WDFY3Q8IZQ1 3526 aa9.7□□□□□ -0.86
SIRPA-204ENST00000622179 ODF3L2Q3SX64 289 aa9.7□□□□□ -0.86
SIRPA-204ENST00000622179 TRAV13-2A0A0B4J235 113 aa9.69□□□□□ -0.86
SIRPA-204ENST00000622179 RBX1P62877 108 aa9.69□□□□□ -0.86
SIRPA-204ENST00000622179 HERV-K104P63124 156 aa9.69□□□□□ -0.86
SIRPA-204ENST00000622179 FOXI1Q12951 378 aa9.69□□□□□ -0.86
SIRPA-204ENST00000622179 COX7B2Q8TF08 81 aa9.69□□□□□ -0.86
SIRPA-204ENST00000622179 SMR3AQ99954 134 aa9.69□□□□□ -0.86
SIRPA-204ENST00000622179 SND1-IT1Q9HBX3 110 aa9.69□□□□□ -0.86
SIRPA-204ENST00000622179 KALRNO60229 2985 aa9.69□□□□□ -0.86
SIRPA-204ENST00000622179 HECTD1Q9ULT8 2610 aa9.69□□□□□ -0.86
SIRPA-204ENST00000622179 RS1O15537 224 aa9.68□□□□□ -0.86
SIRPA-204ENST00000622179 LINC00482Q8N8I6 264 aa9.68□□□□□ -0.86
SIRPA-204ENST00000622179 INAFM1C9JVW0 142 aa9.68□□□□□ -0.86
SIRPA-204ENST00000622179 LAMTOR3Q9UHA4 124 aa9.67□□□□□ -0.86
SIRPA-204ENST00000622179 LOC100131303A0A0U1RQF7 123 aa9.67□□□□□ -0.86
SIRPA-204ENST00000622179 MIAQ16674 131 aa9.67□□□□□ -0.86
SIRPA-204ENST00000622179 DPH3Q96FX2 82 aa9.67□□□□□ -0.86
SIRPA-204ENST00000622179 FLNBO75369 2602 aaKnown RBP9.67□□□□□ -0.86
SIRPA-204ENST00000622179 MIR7-3HGQ8N6C7 128 aa9.67□□□□□ -0.86
SIRPA-204ENST00000622179 IGLV4-69A0A075B6H9 119 aa9.66□□□□□ -0.86
SIRPA-204ENST00000622179 ZNF561-AS1K7EIQ3 104 aa9.66□□□□□ -0.86
SIRPA-204ENST00000622179 IGHV3-30P01768 117 aa9.66□□□□□ -0.86
SIRPA-204ENST00000622179 ATP5G1P05496 136 aa9.66□□□□□ -0.86
SIRPA-204ENST00000622179 IGHV3-30-5P0DP03 117 aa9.66□□□□□ -0.86
SIRPA-204ENST00000622179 PYGO1Q9Y3Y4 419 aa9.66□□□□□ -0.86
SIRPA-204ENST00000622179 KIF25-AS1Q9Y6Z4 181 aa9.66□□□□□ -0.86
SIRPA-204ENST00000622179 BAALC-AS2P0C853 105 aa9.65□□□□□ -0.86
SIRPA-204ENST00000622179 UBE2D4Q9Y2X8 147 aa9.65□□□□□ -0.86
SIRPA-204ENST00000622179 OVOL2Q9BRP0 275 aa9.65□□□□□ -0.86
SIRPA-204ENST00000622179 SPANXB1Q9NS25 103 aaPredicted RBP9.65□□□□□ -0.86
SIRPA-204ENST00000622179 TACC2O95359 2948 aa9.65□□□□□ -0.86
SIRPA-204ENST00000622179 SPART-AS1P0CW21 52 aa9.65□□□□□ -0.86
SIRPA-204ENST00000622179 TSPEAR-AS2P59090 65 aa9.65□□□□□ -0.86
SIRPA-204ENST00000622179 PRO0255Q9UI72 69 aa9.65□□□□□ -0.86
SIRPA-204ENST00000622179 ZNF580Q9UK33 172 aa9.65□□□□□ -0.86
SIRPA-204ENST00000622179 ZZEF1O43149 2961 aa9.65□□□□□ -0.87
SIRPA-204ENST00000622179 FAM222AQ5U5X8 452 aa9.65□□□□□ -0.87
SIRPA-204ENST00000622179 LRBAP50851 2863 aa9.65□□□□□ -0.87
SIRPA-204ENST00000622179 NDUFA7O95182 113 aa9.64□□□□□ -0.87
SIRPA-204ENST00000622179 Q6ZSN1 163 aa9.64□□□□□ -0.87
SIRPA-204ENST00000622179 CRYBA4P53673 196 aa9.63□□□□□ -0.87
SIRPA-204ENST00000622179 C15orf53Q8NAA6 179 aa9.63□□□□□ -0.87
SIRPA-204ENST00000622179 A0A0B4J2C4 111 aa9.63□□□□□ -0.87
SIRPA-204ENST00000622179 IGHV3-33P01772 117 aa9.63□□□□□ -0.87
SIRPA-204ENST00000622179 MRPL23Q16540 153 aaKnown RBP9.63□□□□□ -0.87
SIRPA-204ENST00000622179 COX7A2LO14548 114 aa9.63□□□□□ -0.87
SIRPA-204ENST00000622179 HIST1H4AP62805 103 aaKnown RBP9.63□□□□□ -0.87
SIRPA-204ENST00000622179 LINC00315P59091 139 aa9.62□□□□□ -0.87
SIRPA-204ENST00000622179 RBMY1FQ15415 496 aaKnown RBP9.62□□□□□ -0.87
SIRPA-204ENST00000622179 INAFM2P0DMQ5 153 aa9.62□□□□□ -0.87
SIRPA-204ENST00000622179 FLNAP21333 2647 aaKnown RBP9.62□□□□□ -0.87
SIRPA-204ENST00000622179 CFAP46Q8IYW2 2715 aa9.62□□□□□ -0.87
SIRPA-204ENST00000622179 LY6G6DO95868 133 aa9.62□□□□□ -0.87
SIRPA-204ENST00000622179 C1orf158Q8N1D5 194 aa9.62□□□□□ -0.87
SIRPA-204ENST00000622179 PIK3CD-AS1Q5SR53 167 aa9.61□□□□□ -0.87
SIRPA-204ENST00000622179 FAM19A4Q96LR4 140 aa9.61□□□□□ -0.87
SIRPA-204ENST00000622179 EDA2RQ9HAV5 297 aa9.61□□□□□ -0.87
SIRPA-204ENST00000622179 UFSP1Q6NVU6 142 aa9.61□□□□□ -0.87
SIRPA-204ENST00000622179 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
SIRPA-204ENST00000622179 DMDP11532 3685 aa9.6□□□□□ -0.87
SIRPA-204ENST00000622179 TRAV26-1A0A087WT03 109 aa9.6□□□□□ -0.87
SIRPA-204ENST00000622179 TRIAP1O43715 76 aa9.6□□□□□ -0.87
SIRPA-204ENST00000622179 HILS1P60008 231 aa9.6□□□□□ -0.87
SIRPA-204ENST00000622179 MRAPQ8TCY5 172 aa9.6□□□□□ -0.87
SIRPA-204ENST00000622179 KLK12Q9UKR0 248 aa9.6□□□□□ -0.87
SIRPA-204ENST00000622179 MRPS36P82909 103 aaKnown RBP9.6□□□□□ -0.87
SIRPA-204ENST00000622179 TRBV6-8A0A0A6YYG3 113 aa9.6□□□□□ -0.87
SIRPA-204ENST00000622179 INSL3P51460 131 aa9.6□□□□□ -0.87
SIRPA-204ENST00000622179 TIRAPP58753 221 aa9.6□□□□□ -0.87
SIRPA-204ENST00000622179 LINC00269Q8N2A0 174 aa9.6□□□□□ -0.87
SIRPA-204ENST00000622179 TRBV6-4A0A1B0GX49 114 aa9.59□□□□□ -0.87
SIRPA-204ENST00000622179 POM121L12Q8N7R1 296 aa9.59□□□□□ -0.87
SIRPA-204ENST00000622179 LINC00308Q8TCZ7 52 aa9.59□□□□□ -0.87
SIRPA-204ENST00000622179 COL12A1Q99715 3063 aa9.59□□□□□ -0.87
SIRPA-204ENST00000622179 UBE2D1P51668 147 aa9.58□□□□□ -0.88
SIRPA-204ENST00000622179 Q9HAA7 133 aa9.58□□□□□ -0.88
SIRPA-204ENST00000622179 ITPR3Q14573 2671 aa9.58□□□□□ -0.88
SIRPA-204ENST00000622179 TEX49A0A1B0GTD5 131 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms