RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 NTM-AS1Q6ZSK4 140 aa6.87□□□□□ -1.31
IGHV3-54-201ENST00000622166 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.87□□□□□ -1.31
IGHV3-54-201ENST00000622166 ESM1Q9NQ30 184 aa6.87□□□□□ -1.31
IGHV3-54-201ENST00000622166 CFAP46Q8IYW2 2715 aa6.86□□□□□ -1.31
IGHV3-54-201ENST00000622166 IGSF10Q6WRI0 2623 aa6.86□□□□□ -1.31
IGHV3-54-201ENST00000622166 GIG44P09565 113 aaPredicted RBP6.86□□□□□ -1.31
IGHV3-54-201ENST00000622166 LINC00694P0DN24 101 aa6.86□□□□□ -1.31
IGHV3-54-201ENST00000622166 RPL13AP40429 203 aaKnown RBP6.86□□□□□ -1.31
IGHV3-54-201ENST00000622166 CIRBPQ14011 172 aaKnown RBP6.86□□□□□ -1.31
IGHV3-54-201ENST00000622166 HIST2H2BDQ6DRA6 164 aa6.86□□□□□ -1.31
IGHV3-54-201ENST00000622166 Q6ZTI0 123 aa6.86□□□□□ -1.31
IGHV3-54-201ENST00000622166 OVOL2Q9BRP0 275 aa6.86□□□□□ -1.31
IGHV3-54-201ENST00000622166 A0A1W2PRX2 142 aa6.85□□□□□ -1.31
IGHV3-54-201ENST00000622166 H7C423 109 aa6.85□□□□□ -1.31
IGHV3-54-201ENST00000622166 RNASE1P07998 156 aaKnown RBP6.85□□□□□ -1.31
IGHV3-54-201ENST00000622166 COX6CP09669 75 aa6.85□□□□□ -1.31
IGHV3-54-201ENST00000622166 WFDC11Q8NEX6 87 aa6.85□□□□□ -1.31
IGHV3-54-201ENST00000622166 C16orf74Q96GX8 76 aa6.85□□□□□ -1.31
IGHV3-54-201ENST00000622166 CITED2Q99967 270 aaPredicted RBP6.85□□□□□ -1.31
IGHV3-54-201ENST00000622166 CDC42SE2Q9NRR3 84 aa6.85□□□□□ -1.31
IGHV3-54-201ENST00000622166 PLAC8L1A1L4L8 177 aa6.84□□□□□ -1.31
IGHV3-54-201ENST00000622166 SMIM1B2RUZ4 78 aa6.84□□□□□ -1.31
IGHV3-54-201ENST00000622166 F5H768 121 aa6.84□□□□□ -1.31
IGHV3-54-201ENST00000622166 H3BT86 120 aa6.84□□□□□ -1.31
IGHV3-54-201ENST00000622166 IGLV1-51P01701 117 aa6.84□□□□□ -1.31
IGHV3-54-201ENST00000622166 KRTAP1-1Q07627 177 aa6.84□□□□□ -1.31
IGHV3-54-201ENST00000622166 LINC00308Q8TCZ7 52 aa6.84□□□□□ -1.31
IGHV3-54-201ENST00000622166 COPS9Q8WXC6 57 aa6.84□□□□□ -1.31
IGHV3-54-201ENST00000622166 ZNF625Q96I27 306 aaPredicted RBP6.84□□□□□ -1.31
IGHV3-54-201ENST00000622166 TMEM243Q9BU79 118 aa6.84□□□□□ -1.31
IGHV3-54-201ENST00000622166 C19orf73Q9NVV2 129 aa6.84□□□□□ -1.31
IGHV3-54-201ENST00000622166 TRBV6-4A0A1B0GX49 114 aa6.83□□□□□ -1.32
IGHV3-54-201ENST00000622166 GAGE12JA6NER3 117 aa6.83□□□□□ -1.32
IGHV3-54-201ENST00000622166 LST1O00453 97 aa6.83□□□□□ -1.32
IGHV3-54-201ENST00000622166 MT-ATP8P03928 68 aa6.83□□□□□ -1.32
IGHV3-54-201ENST00000622166 XGP55808 180 aa6.83□□□□□ -1.32
IGHV3-54-201ENST00000622166 HERV-K104P63124 156 aa6.83□□□□□ -1.32
IGHV3-54-201ENST00000622166 GAGE4Q13068 117 aa6.83□□□□□ -1.32
IGHV3-54-201ENST00000622166 GAGE5Q13069 117 aa6.83□□□□□ -1.32
IGHV3-54-201ENST00000622166 LINC01006Q8NI28 216 aa6.83□□□□□ -1.32
IGHV3-54-201ENST00000622166 NTN5Q8WTR8 489 aaPredicted RBP6.83□□□□□ -1.32
IGHV3-54-201ENST00000622166 Q9H8V8 135 aa6.83□□□□□ -1.32
IGHV3-54-201ENST00000622166 A0A1B0GV72 72 aa6.82□□□□□ -1.32
IGHV3-54-201ENST00000622166 DEFB121Q5J5C9 76 aa6.82□□□□□ -1.32
IGHV3-54-201ENST00000622166 C11orf44Q8N8P7 122 aa6.82□□□□□ -1.32
IGHV3-54-201ENST00000622166 CSNK1G2-AS1Q8NCQ2 148 aa6.82□□□□□ -1.32
IGHV3-54-201ENST00000622166 NOP10Q9NPE3 64 aaKnown RBP6.82□□□□□ -1.32
IGHV3-54-201ENST00000622166 CELSR1Q9NYQ6 3014 aa6.82□□□□□ -1.32
IGHV3-54-201ENST00000622166 FLNCQ14315 2725 aa6.81□□□□□ -1.32
IGHV3-54-201ENST00000622166 NDUFA7O95182 113 aa6.81□□□□□ -1.32
IGHV3-54-201ENST00000622166 NPC2P61916 151 aa6.81□□□□□ -1.32
IGHV3-54-201ENST00000622166 C2orf82Q6UX34 121 aa6.81□□□□□ -1.32
IGHV3-54-201ENST00000622166 UBE2WQ96B02 151 aa6.81□□□□□ -1.32
IGHV3-54-201ENST00000622166 FBN2P35556 2912 aa6.81□□□□□ -1.32
IGHV3-54-201ENST00000622166 TRAV13-1A0A0B4J241 112 aa6.8□□□□□ -1.32
IGHV3-54-201ENST00000622166 UBE2L6O14933 153 aa6.8□□□□□ -1.32
IGHV3-54-201ENST00000622166 GAGE7O76087 117 aa6.8□□□□□ -1.32
IGHV3-54-201ENST00000622166 GAGE12FP0CL80 117 aa6.8□□□□□ -1.32
IGHV3-54-201ENST00000622166 GAGE12GP0CL81 117 aa6.8□□□□□ -1.32
IGHV3-54-201ENST00000622166 GAGE12IP0CL82 117 aa6.8□□□□□ -1.32
IGHV3-54-201ENST00000622166 CKS1BP61024 79 aa6.8□□□□□ -1.32
IGHV3-54-201ENST00000622166 SHISA2Q6UWI4 295 aa6.8□□□□□ -1.32
IGHV3-54-201ENST00000622166 SOSTDC1Q6X4U4 206 aa6.8□□□□□ -1.32
IGHV3-54-201ENST00000622166 CITED1Q99966 193 aa6.8□□□□□ -1.32
IGHV3-54-201ENST00000622166 USP9YO00507 2555 aaPredicted RBP6.8□□□□□ -1.32
IGHV3-54-201ENST00000622166 TRAV8-4A0A0B4J246 113 aa6.79□□□□□ -1.32
IGHV3-54-201ENST00000622166 COX7A2LO14548 114 aa6.79□□□□□ -1.32
IGHV3-54-201ENST00000622166 RPL35AP18077 110 aaKnown RBP6.79□□□□□ -1.32
IGHV3-54-201ENST00000622166 FHL2Q14192 279 aa6.79□□□□□ -1.32
IGHV3-54-201ENST00000622166 PRIMA1Q86XR5 153 aa6.79□□□□□ -1.32
IGHV3-54-201ENST00000622166 DAND5Q8N907 189 aa6.79□□□□□ -1.32
IGHV3-54-201ENST00000622166 CLEC2BQ92478 149 aa6.79□□□□□ -1.32
IGHV3-54-201ENST00000622166 UTP20O75691 2785 aaKnown RBP6.78□□□□□ -1.32
IGHV3-54-201ENST00000622166 TRGV2A0A075B6R0 118 aa6.78□□□□□ -1.32
IGHV3-54-201ENST00000622166 MRPL23Q16540 153 aaKnown RBP6.78□□□□□ -1.32
IGHV3-54-201ENST00000622166 MEIG1Q5JSS6 88 aa6.78□□□□□ -1.32
IGHV3-54-201ENST00000622166 LINC00612Q8N6U2 182 aa6.78□□□□□ -1.32
IGHV3-54-201ENST00000622166 ACACBO00763 2458 aa6.78□□□□□ -1.32
IGHV3-54-201ENST00000622166 UBR5O95071 2799 aaPredicted RBP6.78□□□□□ -1.32
IGHV3-54-201ENST00000622166 TRGV4A0A0C4DH28 118 aa6.77□□□□□ -1.33
IGHV3-54-201ENST00000622166 LOC100131303A0A0U1RQF7 123 aa6.77□□□□□ -1.33
IGHV3-54-201ENST00000622166 TEX49A0A1B0GTD5 131 aa6.77□□□□□ -1.33
IGHV3-54-201ENST00000622166 FAM222AQ5U5X8 452 aa6.77□□□□□ -1.33
IGHV3-54-201ENST00000622166 Q6Q795 121 aa6.77□□□□□ -1.33
IGHV3-54-201ENST00000622166 KIR2DL5BQ8NHK3 375 aa6.77□□□□□ -1.33
IGHV3-54-201ENST00000622166 COX7B2Q8TF08 81 aa6.77□□□□□ -1.33
IGHV3-54-201ENST00000622166 WFDC10AQ9H1F0 79 aa6.77□□□□□ -1.33
IGHV3-54-201ENST00000622166 TRBV6-8A0A0A6YYG3 113 aa6.76□□□□□ -1.33
IGHV3-54-201ENST00000622166 FAM240AA0A1B0GVK7 77 aa6.76□□□□□ -1.33
IGHV3-54-201ENST00000622166 TRACP01848 142 aa6.76□□□□□ -1.33
IGHV3-54-201ENST00000622166 PF4P02776 101 aa6.76□□□□□ -1.33
IGHV3-54-201ENST00000622166 HILS1P60008 231 aa6.76□□□□□ -1.33
IGHV3-54-201ENST00000622166 GAGE6Q13070 117 aa6.76□□□□□ -1.33
IGHV3-54-201ENST00000622166 USP24Q9UPU5 2620 aa6.76□□□□□ -1.33
IGHV3-54-201ENST00000622166 ZNF462Q96JM2 2506 aa6.76□□□□□ -1.33
IGHV3-54-201ENST00000622166 CELSR2Q9HCU4 2923 aa6.75□□□□□ -1.33
IGHV3-54-201ENST00000622166 FAM208BQ5VWN6 2430 aa6.75□□□□□ -1.33
IGHV3-54-201ENST00000622166 ZFHX3Q15911 3703 aa6.75□□□□□ -1.33
IGHV3-54-201ENST00000622166 CREBBPQ92793 2442 aa6.75□□□□□ -1.33
IGHV3-54-201ENST00000622166 POLQO75417 2590 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms