RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 RAX2Q96IS3 184 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 SPXQ9BT56 116 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 TIMM21Q9BVV7 248 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 SPANXDQ9BXN6 97 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 ESM1Q9NQ30 184 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 SPANXA1Q9NS26 97 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 MRPL16Q9NX20 251 aaKnown RBP2.32□□□□□ -2.04
U1.39-201ENST00000621562 SPANXCQ9NY87 97 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 PRO1854Q9UHT4 67 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 PLECQ15149 4684 aaKnown RBP2.32□□□□□ -2.04
U1.39-201ENST00000621562 IGHV3-64A0A075B6Q5 118 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.31□□□□□ -2.04
U1.39-201ENST00000621562 IGHV3OR16-12A0A075B7B8 117 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 TRAV25A0A0B4J276 109 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 IGHV1-58A0A0C4DH39 117 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 TRBV30A0A0K0K1B3 111 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 PLAC8L1A1L4L8 177 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 IGKV2-29A2NJV5 120 aaPredicted RBP2.31□□□□□ -2.04
U1.39-201ENST00000621562 DNAJC9-AS1A6NH13 148 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 ADARB2-AS1A8MUL3 147 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 A8MZ25 164 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 F5H768 121 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 TIMM17BO60830 172 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 PSMB2P49721 201 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 SRSF9Q13242 221 aaKnown RBP eCLIP2.31□□□□□ -2.04
U1.39-201ENST00000621562 SCGB2A2Q13296 93 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 MIAQ16674 131 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 RNASE13Q5GAN3 156 aaKnown RBP2.31□□□□□ -2.04
U1.39-201ENST00000621562 SFTA2Q6UW10 78 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 NTM-AS1Q6ZSK4 140 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 TEN1Q86WV5 123 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 MUSTN1Q8IVN3 82 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 ANKRD29Q8N6D5 301 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 PPDPFLQ8WWR9 84 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 RNF183Q96D59 192 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 VSIG2Q96IQ7 327 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 DNAJC30Q96LL9 226 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 Q96MF0 132 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 SIGMAR1Q99720 223 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 GTSF1LQ9H1H1 148 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 VCX2Q9H322 139 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 STAB1Q9NY15 2570 aa2.31□□□□□ -2.04
U1.39-201ENST00000621562 HECTD4Q9Y4D8 3996 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 TRBV20-1A0A075B6N2 111 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 IGHV3-38A0A0C4DH36 116 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 LOC107984156A0A0G2JMH3 177 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 SMIM1B2RUZ4 78 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 K7EQD1 137 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 NDUFA1O15239 70 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 TRIAP1O43715 76 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 SPINK8P0C7L1 97 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 XGP55808 180 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 TIRAPP58753 221 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 COX6A2Q02221 97 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 LINC01620Q4KN68 170 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 LYRM7Q5U5X0 104 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 SOSTDC1Q6X4U4 206 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 Q6ZTI0 123 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 ARL17AQ8IVW1 177 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 ZNF625Q96I27 306 aaPredicted RBP2.3□□□□□ -2.04
U1.39-201ENST00000621562 TMEM101Q96IK0 257 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 CITED1Q99966 193 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 C19orf73Q9NVV2 129 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 PEMTQ9UBM1 199 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 CDKN2A-AS1Q9UH64 79 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 NDUFA12Q9UI09 145 aa2.3□□□□□ -2.04
U1.39-201ENST00000621562 DNAH2Q9P225 4427 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 F8P00451 2351 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.29□□□□□ -2.04
U1.39-201ENST00000621562 TRAV4A0A0B4J268 109 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 TRBV10-1A0A0K0K1A3 114 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 J3QR89 54 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 SLC25A20O43772 301 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 MT-ATP8P03928 68 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 RPL13AP40429 203 aaKnown RBP2.29□□□□□ -2.04
U1.39-201ENST00000621562 SMAGPQ0VAQ4 97 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 DEFB121Q5J5C9 76 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 LINC00242Q5T6M2 205 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 CSNK1G2-AS1Q8NCQ2 148 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 WFDC11Q8NEX6 87 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 DYNLRB2Q8TF09 96 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 ZNF418Q8TF45 676 aaPredicted RBP2.29□□□□□ -2.04
U1.39-201ENST00000621562 LINC01587Q99440 93 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 CITED2Q99967 270 aaPredicted RBP2.29□□□□□ -2.04
U1.39-201ENST00000621562 WFDC10AQ9H1F0 79 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 PPDPFQ9H3Y8 114 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 C16orf95Q9H693 158 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 XCL2Q9UBD3 114 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 CSDC2Q9Y534 153 aaKnown RBP2.29□□□□□ -2.04
U1.39-201ENST00000621562 TNFRSF18Q9Y5U5 241 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 ICOSQ9Y6W8 199 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 MAST4O15021 2626 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 NOTCH1P46531 2555 aa2.29□□□□□ -2.04
U1.39-201ENST00000621562 NBEAL1Q6ZS30 2694 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 TRGV1A0A0A0MS02 117 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 LOC100131303A0A0U1RQF7 123 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 C9JAW5 83 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 CCL24O00175 119 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 LST1O00453 97 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 NDUFA7O95182 113 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms